BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg490893
Length=3463
Score E
Sequences producing significant alignments: (Bits) Value
AT4G37270.1 | Symbols: HMA1, ATHMA1 | heavy metal atpase 1 | ch... 4002 0.0
AT4G37260.1 | Symbols: MYB73, ATMYB73 | myb domain protein 73 |... 606 4e-172
AT5G34780.1 | Symbols: | Thiamin diphosphate-binding fold (THD... 104 6e-21
> AT4G37270.1 | Symbols: HMA1, ATHMA1 | heavy metal atpase 1 |
chr4:17541771-17546484 REVERSE LENGTH=2808
Length=2808
Score = 4002 bits (2167), Expect = 0.0
Identities = 2438/2568 (95%), Gaps = 22/2568 (1%)
Strand=Plus/Plus
Query 1 TTCTTCTTTGTCACC-A-A-G-ACGACTCTAATACGCAGAGTTCGTGAGATCAGAATCAA 56
||| ||||| ||||| | | | |||||||| | |||||||||||| ||||||||||||||
Sbjct 31 TTCATCTTTTTCACCAAGACGAACGACTCTTACACGCAGAGTTCGCGAGATCAGAATCAA 90
Query 57 TGGTGGCATGAAAAACGACGCTTGAGAGCTCCAATTCGTCGATTATGGAACCTGCAGCTC 116
||||||||||||||||||||||| |||||| |||||||||| |||||||||||| |||
Sbjct 91 TGGTGGCATGAAAAACGACGCTT--GAGCTCAAATTCGTCGACCATGGAACCTGCAACTC 148
Query 117 TTACTCGTTCTTCCTCTCTCACTAGATTCCCTTATCGTCGCGGTTTAGCTACTCTCCGAC 176
||||||||||||||||||| |||||||||||||||||||| |||||| | ||||||||||
Sbjct 149 TTACTCGTTCTTCCTCTCTTACTAGATTCCCTTATCGTCGTGGTTTATCCACTCTCCGAC 208
Query 177 TCGCTCGAGTCAACTCGTTCTCAGTTCTTCCACCTAAGACTCTTCTCCATCGAAAACCTC 236
||||||||||||||||||||||| ||||||||||||| |||||||||| || |||| |
Sbjct 209 TCGCTCGAGTCAACTCGTTCTCAATTCTTCCACCTAAAACTCTTCTCCGTC-AAAA--AC 265
Query 237 TCCCTCTCTCTATCTCTGCCTCCCTTAGTCTTCCACCACGGTCGATTCGTCTACGTGCTG 296
| || || ||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct 266 -CGCT-TC-GTATCTCTGCTTCCCTTAATCTTCCACCACGGTCGATTCGTCTACGTGCTG 322
Query 297 TCGAAGaccaccatcacgatcatcatcatgatgacgagcaagatcatgaccaccaccatc 356
||||||| |||||||||||||||||||| |||||||||||||||||| ||| |||| |
Sbjct 323 TCGAAGATCACCATCACGATCATCATCACGATGACGAGCAAGATCAT---CACAACCA-C 378
Query 357 atcatcatcatcaccatcaACACGGATGCTGTTCCGTGGAATTGAAAGCGGAGAGTAAGC 416
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 379 --CATCATCATCACCATCAACACGGATGCTGTTCTGTGGAATTGAAAGCGGAGAGTAAGC 436
Query 417 CTCAGAAGGTGTTGTTCGGATTCGCTAAAGCCGTTGGATGGGTTCGATTGGCCAATTACC 476
|||||||| |||||||||||||||||||||| | ||||||||| |||||||||||||||
Sbjct 437 CTCAGAAGATGTTGTTCGGATTCGCTAAAGCTATCGGATGGGTTAGATTGGCCAATTACC 496
Query 477 TCAGGGAGCATCTTCATCTTTGCTGCTCCGCCGCCGCAATGTTCCTCGCTGCCGCCG-CG 535
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 497 TCAGAGAGCATCTTCATCTTTGCTGCTCCGCCGCTGCAATGTTCCTCGCTGCCGCCGTC- 555
Query 536 TGTCCTTACCTTGCTCCTAAACCTTACATTAAGTCTCTTCAGAACGCATTCATGATTGTT 595
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 556 TGTCCTTACCTTGCTCCTGAACCTTACATTAAGTCTCTTCAGAACGCATTCATGATTGTT 615
Query 596 GGTTTCCCTCTTGTTGGAGTTTCAGCGTCTCTCGACGCACTTATGGATATAGCAGGAGGA 655
||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 616 GGTTTTCCTCTTGTTGGAGTTTCAGCATCTCTCGACGCACTTATGGATATAGCTGGAGGA 675
Query 656 AAAGTGAACATTCATGTATTGATGGCACTTGCGGCTTTTGCATCTGTGTTTATGGGGAAT 715
||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 676 AAAGTGAACATCCATGTCTTGATGGCACTTGCGGCTTTTGCATCTGTGTTTATGGGAAAT 735
Query 716 GCTTTGGAAGGAGGATTACTTCTAGCCATGTTCAATCTTGCTCATATTGCTGAGGAGTTC 775
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 736 GCTTTGGAAGGAGGATTGCTTCTAGCTATGTTCAATCTTGCTCATATTGCTGAGGAGTTC 795
Query 776 TTCACTAGTCGATCAATGGTGGATGTGAAAGAGTTAAAAGAGAGTAATCCGGATTCTGCA 835
|| ||||||||||||||||||||||| ||||| || |||||||||||||| |||||||||
Sbjct 796 TTTACTAGTCGATCAATGGTGGATGTCAAAGAATTGAAAGAGAGTAATCCAGATTCTGCA 855
Query 836 CTGTTGATCGAAGTACTCAATGGCAATGTTCCAAATATTTCTGATTTGTCCTACAAAAGC 895
||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 856 TTGTTGATCGAAGTACACAATGGCAATGTTCCAAATATATCTGATTTGTCATACAAAAGC 915
Query 896 GTTCCTGTACACAGTGTAGAAGTTGGATCCTATATATTGGTTGGAACTGGTGAGATTGTG 955
|||||||| ||||| |||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 916 GTTCCTGTGCACAGCGTAGAAGTTGGATCCTATGTTTTGGTTGGAACTGGTGAGATTGTG 975
Query 956 CCTGTAGATTGCGAAGTCTACCAAGGTAGTGCTACAATAACCATTGAGCACTTGACTGGG 1015
|||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct 976 CCTGTAGATTGCGAAGTCTATCAAGGTAGTGCTACAATTACAATTGAGCACTTGACTGGG 1035
Query 1016 GAAGTCAAGCCGTTGGAGGCAAAAGCTGGAGATAGAGTGCCTGGTGGTGCAAGAAATTTG 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 GAAGTCAAGCCGTTGGAGGCAAAAGCTGGAGATAGAGTGCCTGGTGGTGCAAGAAATTTG 1095
Query 1076 GATGGCAGAATGATTGTGAAGGCGACAAAGGCATGGAATGATTCGACGCTTAACAAGATT 1135
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1096 GATGGCAGAATGATTGTAAAGGCTACAAAGGCATGGAATGATTCGACGCTTAACAAGATT 1155
Query 1136 GTACAGCTGACCGAGGAAGCACATTCTAAAAAACCCAAACTTCAGAGATGGCTGGATGAG 1195
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1156 GTACAGCTGACCGAGGAAGCACATTCTAATAAACCCAAACTTCAGAGATGGCTGGATGAG 1215
Query 1196 TTTGGCGAGAATTACAGCAAGGTTGTAGTTGTTTTGTCACTTGCAATTGCCTTCCTAGGT 1255
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1216 TTTGGCGAGAATTACAGCAAGGTTGTCGTTGTTTTGTCACTTGCAATTGCCTTCCTAGGT 1275
Query 1256 CCATTTTTGTTCAAGTGGCCTTTTCTCAGCACCGCAGCATGCAGAGGATCTGTTTACAGA 1315
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1276 CCATTTTTGTTCAAGTGGCCTTTTCTCAGCACCGCAGCATGTAGAGGATCTGTTTACAGA 1335
Query 1316 GCATTGGGACTTATGGTGGCCGCATCACCATGTGCTTTGGCCGTAGCTCCATTGGCTTAT 1375
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1336 GCATTGGGACTTATGGTGGCCGCATCACCATGTGCTCTGGCCGTAGCTCCATTGGCTTAT 1395
Query 1376 GCTACTGCTATTAGTTCCTGTGCAAGAAAGGGAATATTGCTGAAAGGTGCACAGGTCCTA 1435
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1396 GCTACTGCTATTAGTTCCTGTGCAAGAAAGGGAATATTGCTGAAAGGTGCACAGGTTCTA 1455
Query 1436 GATGCTCTCGCATCTTGCCATACTGTTGCTTTTGACAAAACCGGGACCTTAACAACCGGC 1495
|||||||| || |||||||||||| |||||||||||||||| || |||||||||||||||
Sbjct 1456 GATGCTCTTGCGTCTTGCCATACTATTGCTTTTGACAAAACTGGTACCTTAACAACCGGC 1515
Query 1496 GGCCTTACTTGCAAAGCAATTGAACCCATTTATGGGCACCAAGGAGGAAATAATTCAAGT 1555
||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1516 GGCCTTACTTGTAAAGCAATTGAACCCATTTATGGGCACCAAGGAGGAACTAATTCAAGT 1575
Query 1556 GTAACAACTTGCTGCATTCCAAATTGTGAAAAAGAAGCTCTTGCTGTAGCGGCTGCCATG 1615
|||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 1576 GTAATAACTTGCTGCATTCCAAATTGTGAAAAAGAAGCTCTTGCAGTTGCGGCTGCCATG 1635
Query 1616 GAGAAGGGCACCACACATCCTATTGGAAGAGCTGTTGTAGATCACAGTGTGGGTAAAGAC 1675
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1636 GAGAAGGGCACCACGCATCCTATTGGAAGAGCTGTTGTAGATCACAGTGTGGGTAAGGAT 1695
Query 1676 CTTCCTTCTATTTTTGTTGAAAGCTTCGAATATTTTCCTGGTAGAGGCCTTACTGCAACT 1735
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1696 CTTCCTTCTATTTTTGTTGAAAGCTTCGAATATTTTCCTGGTAGAGGCCTTACTGCTACT 1755
Query 1736 GTAAACGGTGCCAAGTCGGTAGCTGAAGAAAGTAGATTACGAAAAGCATCACTTGGTTCG 1795
|| ||||||| ||| | ||||||||||| |||||||||||||||||||||||||||||
Sbjct 1756 GTCAACGGTGTTAAGACAGTAGCTGAAGAGAGTAGATTACGAAAAGCATCACTTGGTTCT 1815
Query 1796 ATAGAGTTCATTACCTCGCTTTTCAAATCTGAAGATGAGTCTAAACAGATCAAGGATGCT 1855
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 1816 ATAGAGTTCATTACCTCACTTTTCAAATCTGAAGATGAATCTAAACAGATCAAGGATGCT 1875
Query 1856 GTAAACGCCTCTTTGTACGGGAATGACTTTGTTCATGCAGCTCTTTCTGTTGATCAAAAG 1915
|||||||| |||| |||||| || ||||| |||||||| |||||||||||||||||||||
Sbjct 1876 GTAAACGCGTCTTCGTACGGAAAGGACTTCGTTCATGCTGCTCTTTCTGTTGATCAAAAG 1935
Query 1916 GTAACATTGATTCACCTCGAAGATCAGCCTCGTCCAGGGGTGTCAGGAGTTATAGCAGAA 1975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1936 GTAACATTGATTCACCTCGAAGATCAGCCTCGTCCAGGGGTGTCAGGAGTTATAGCAGAA 1995
Query 1976 CTTAAAAGCTGGGCCAGACTCCGAGTAATGATGTTAACTGGGGATCATGATTCAAGTGCT 2035
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1996 CTTAAAAGCTGGGCCAGACTCCGAGTAATGATGTTAACTGGGGACCATGATTCAAGTGCT 2055
Query 2036 TGGAGAGTTGCAAACGCAGTGGGTATTACCGAAGTCTACTGCAACCTAAAGCCAGAGGAT 2095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2056 TGGAGAGTTGCAAACGCAGTGGGTATTACCGAAGTCTACTGCAACCTAAAGCCAGAGGAT 2115
Query 2096 AAATTAAATCATGTAAAGAACATCT-CTCGGGAAGCAGGTGGAGGTTTAATTATGGTAGG 2154
|| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 2116 AAGTTAAATCATGTAAAGAACAT-TGCTCGGGAAGCAGGTGGAGGTTTAATTATGGTAGG 2174
Query 2155 AGAAGGGATTAATGATGCTCCAGCTCTAGCAGCTGCAACAGTTGGGATTGTTCTTGCTCA 2214
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2175 AGAAGGGATTAATGATGCTCCAGCTCTAGCAGCTGCAACAGTGGGGATTGTTCTTGCTCA 2234
Query 2215 ACGAGCGAGTGCCACCGCGATTGCTGTTGCTGACATCTTACTGCTTCGAGACAACATCAC 2274
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2235 ACGAGCGAGTGCCACTGCGATTGCCGTTGCTGACATCTTACTGCTTCGAGACAACATCAC 2294
Query 2275 CGGTGTTCCGTTCTGTGTCGCTAAATCCCGCCAGACAACATCATTGGTCAAGCAAAACGT 2334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CGGTGTTCCGTTCTGTGTCGCTAAATCCCGCCAGACAACATCATTGGTCAAGCAAAACGT 2354
Query 2335 AGCTCTTGCGTTAACATCGATATTCGTGGCTGCTCTTCCATCAGTTTTAGGGTTTGTTCC 2394
||||||||| ||||||||||||||| |||| |||||||| ||||||||||||||||| ||
Sbjct 2355 AGCTCTTGCATTAACATCGATATTCTTGGCCGCTCTTCCTTCAGTTTTAGGGTTTGTCCC 2414
Query 2395 ATTGTGGTTGACGGTACTTCTACATGAAGGCGGGACTCTTCTCGTGTGTCTAAACTCAGT 2454
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2415 ATTGTGGTTGACGGTACTTCTACATGAAGGCGGGACTCTTCTGGTGTGTCTAAACTCAGT 2474
Query 2455 ACGTGGTCTAAACGATCCATCATGGTCGTGGAAACAAGACATAGTACATCTAATCAACAA 2514
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2475 ACGTGGTCTAAACGATCCATCATGGTCGTGGAAACAAGACATAGTTCATCTAATCAACAA 2534
Query 2515 GTTAAGCTCACAAGAACCCACCAGTATCAGCAGCAACAGTTTAAGCTC 2562
|||| ||||||||||||| ||||||| |||||||||||||||||||||
Sbjct 2535 GTTACGCTCACAAGAACCAACCAGTAGCAGCAGCAACAGTTTAAGCTC 2582
Score = 89.8 bits (48), Expect = 2e-16
Identities = 77/89 (87%), Gaps = 10/89 (11%)
Strand=Plus/Plus
Query 2658 TTATATTTACTACTTGTGGTTTATGTTTGCTTCCTCCGTTCCTCGTAACAAACCCATAGA 2717
||||||||||||||| | ||||||||||| | ||||||||||||||||||||||
Sbjct 2730 TTATATTTACTACTTTTAGTTTATGTTTG-----T---TTCCTCGTAACAAACCCATAGA 2781
Query 2718 ATAAAAAAGTTTGAGAAGTGTTTTTGACT 2746
|| |||||||||||||||||||||||||
Sbjct 2782 AT--AAAAGTTTGAGAAGTGTTTTTGACT 2808
> AT4G37260.1 | Symbols: MYB73, ATMYB73 | myb domain protein 73
| chr4:17540490-17541799 FORWARD LENGTH=1310
Length=1310
Score = 606 bits (328), Expect = 4e-172
Identities = 394/424 (93%), Gaps = 12/424 (3%)
Strand=Plus/Minus
Query 2815 TTTTAGATTTCGCTTCCTCC-TT--TCGTCTCTACTACTGGCTCTATACATGAAAAGCCT 2871
|||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 1184 TTTTTGATTTCGCTTCCTCCTTTCGTCGTCTCTACTACTGGCTCTATACATGAAAAGCCT 1125
Query 2872 GAAACTTTTATTTCCCCGAGAAACAGAGGGAAAATTTGTTCTTATCACTCTACTACTCCA 2931
||||||||||||| |||||||||||||||||||| |||||||||||| || ||||||||
Sbjct 1124 GAAACTTTTATTTTCCCGAGAAACAGAGGGAAAACTTGTTCTTATCA--CT-CTACTCCA 1068
Query 2932 TCTTCCCAATTCCGATTTGGTTAACTATAAACTCTCTAAACCCAACACGACGGCTGTTTA 2991
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1067 TCTTCCCAATTCCGATTTGGTTCACTATAAACTCTCTAAACCCAACACGACGGCTGTTTA 1008
Query 2992 CACTTTGCGGCATACACGAACCACCACTTCCTCCACC-G---GA--ACCACCGACGTTCC 3045
||||||| |||||||||||||| |||| ||| || || | | |||||||||||| |
Sbjct 1007 CACTTTGTGGCATACACGAACCGCCACCTCCGCCGCCAGAACTACTACCACCGACGTTTC 948
Query 3046 CTCGCTGTAAATCCGCCATGTAACTCCTCACCTCAGTCCTAATCATCTCCTGAACCACCG 3105
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 947 CTCGCTGTAAATCCGCCATGTAACTCCTCACCTCCGTCCTTATCATCTCCTGAACCACCG 888
Query 3106 TCATGAACTCACCACCGAATCCACCAGATATCCCTTTCCCTTCTTCTTCGTCTACTTCCA 3165
|||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||
Sbjct 887 TCATGAACTCACCACCGAATCCACCAGATATCCCCTTCGCTTCTTCTTCTTCTACTTCCA 828
Query 3166 CTTGCTCTTCCTTTCTAACCGGAAACAGCTCCGCCGTGTAACCACCATCCATAACCGTAT 3225
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 827 CTTGCTCTTCCTTTCTAACCGGAAACAGCTCCGCCGTATAACCACCGTCCATAACCGTAT 768
Query 3226 TCTG 3229
||||
Sbjct 767 TCTG 764
Score = 351 bits (190), Expect = 2e-95
Identities = 221/236 (94%), Gaps = 2/236 (1%)
Strand=Plus/Minus
Query 3229 GCTGGTTACACCACCGGAGCCGGCAAGATTTGCCGGAACGTCCAGGGATAGATTTGCTTA 3288
||||||||||||||||||| || |||||||||||||||||||||||||| |||||||| |
Sbjct 287 GCTGGTTACACCACCGGAGACGACAAGATTTGCCGGAACGTCCAGGGATTGATTTGCTAA 228
Query 3289 TCAAAGACCAGTTTCTCGGACCGTGTTTCTGAACAAGCCTCTGCAACAGATCGTCTTCTT 3348
||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 227 TCAAAGACCAGTTCCTCGGACCATGTTTCTGAACAAGCCTCTGCAACAGATCATCTTCTT 168
Query 3349 CTGGACTCCATGGACCTTTAATCCTCTCCATATTCTTTCGGGTCGGGTTTGACATCGCCG 3408
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 167 CTGGACTCCATGGACCTTTAATCCTCTCCATATTCTTACGGGTCGGGTTTGACATCGCCG 108
Query 3409 GATCTTTTTATCGGGCTGTTCTGTTTTTT-CTTTCTAACGCGGCCTCTGttttttt 3463
|||||||||||||| |||||| |||||| ||| |||||||| ||||| |||||||
Sbjct 107 GATCTTTTTATCGGATTGTTCTTTTTTTTTCTT-CTAACGCGTCCTCTTTTTTTTT 53
Score = 111 bits (60), Expect = 4e-23
Identities = 87/98 (89%), Gaps = 9/98 (9%)
Strand=Plus/Minus
Query 2722 AAAAGTTTGAGAAGTGTTTTTGACTTTTCTCCTTCA-GTTTTTCTGTAAAAATTGTTAAT 2780
|||||||||||||||||||||||||||||| ||||| |||| | ||||| ||||||||
Sbjct 1306 AAAAGTTTGAGAAGTGTTTTTGACTTTTCTTCTTCAAGTTTGT--GTAAA--TTGTTAAT 1251
Query 2781 ----GATCTTGCTTTGCTTTTAATTGAATCACGAAAGA 2814
||||||||||||||||||||||||||||||||||
Sbjct 1250 AAATGATCTTGCTTTGCTTTTAATTGAATCACGAAAGA 1213
> AT5G34780.1 | Symbols: | Thiamin diphosphate-binding fold (THDP-binding)
superfamily protein | chr5:12961682-12963892 REVERSE
LENGTH=1098
Length=1098
Score = 104 bits (56), Expect = 6e-21
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 3156 TCT-ACTTCCACTTGCTCTTCCTTTCTAACCGGAAACAGCTCCGCCGTGTAACCACCATC 3214
||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct 1092 TCTAACTTCCCCTTGCTCTTCCTTCCTAATCGGAAACAGCTCCGCCGTGTAACCACCATC 1033
Query 3215 CATAACCGTATTCTG 3229
| ||||| |||||||
Sbjct 1032 CTTAACCATATTCTG 1018
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 172373616148
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5