BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg490898 Length=1206 Score E Sequences producing significant alignments: (Bits) Value AT4G36910.1 | Symbols: LEJ2, CDCP2 | Cystathionine beta-synthas... 1759 0.0 > AT4G36910.1 | Symbols: LEJ2, CDCP2 | Cystathionine beta-synthase (CBS) family protein | chr4:17390626-17393339 REVERSE LENGTH=1222 Length=1222 Score = 1759 bits (952), Expect = 0.0 Identities = 1142/1228 (93%), Gaps = 36/1228 (3%) Strand=Plus/Plus Query 2 GTTTAGCCATTAAAGTCACAGTCACACTTTCGCTTTTCCCAATACAAACAAGCGGTGACG 61 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 8 GTTTAGCCATTAAAGTCACAGTCACACTTTCGCTTTTCCCAATACGAACAAGCGGTGACG 67 Query 62 CATATCTCCTCCT-CCATCACTCTTTTACTTCCGGCGATCTCTCTCCGACGGCCAATGGA 120 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 68 CATATCTCCT-GTATCATCACTCTTTTACTTCCGGCGATCTCTCTCCGACGGCCAATGGA 126 Query 121 CGCCGTCCTATACTCTGTTCCACTCTCCTTCACGCGCCTACGCGCATCATCCTCTCCTTC 180 ||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct 127 CGCCGTCCTTTACTCTGTTCCACTCTCCTTCACTCCCCTACGCGCATCATCCTCTCCTTC 186 Query 181 CTCGCCGTATCTTCTTCCGCCGAGGTTTCTCTCCGTTCAGCCATGTCACAAATTCACCTT 240 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 187 CTCGCCGTATCTTCTTCTGCCGAGGTTTCTCTCCGTTCAGCCATGTCACAAATTCACCTT 246 Query 241 CTCTCGAAGCTTCCCTTCCAAATCCAGGATTCCTTCAGCTTCTTCCGCCGCCGGTTCCAC 300 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 247 CTCTCGAAGCTTCCCTTCCAAATCCCGGATTCCCTCAGCTTCTTCCGCCGCCGGTTCCAC 306 Query 301 GTTGATGAAGAATTCCTCTTCGCCAAGAAGTGGAGTGTACACTGTTGGTGAGTTCATGAC 360 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 307 GTTGATGACGAATTCCTCTTCGCCAAGAAGTGGAGTGTACACTGTTGGTGAGTTCATGAC 366 Query 361 AAAGAAGGATGACTTGCACGTGGTGAAACCTACGACTACTGTGGATCAAGCTCTGGAACT 420 |||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 367 AAAGAAAGAGGACTTGCACGTGGTGAAACCTACGACTACTGTGGATGAAGCTCTGGAACT 426 Query 421 CCTTGTGGAGAATAGAATTACAGGATTTCCTGTGATAGATGACGACTGGAAATTGGTTGG 480 |||||||||||||||||| || ||||||||||| || || || ||||||||||||||||| Sbjct 427 CCTTGTGGAGAATAGAATCACTGGATTTCCTGTAATTGACGAAGACTGGAAATTGGTTGG 486 Query 481 GCTTGTTTCAGATTATGACTTGTTGGCTTTGGACTCCATATCTGGTAGTGGAAGAACAGA 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 487 GCTTGTTTCAGATTATGACTTGTTGGCTTTGGACTCCATATCTGGTAGTGGAAGAACAGA 546 Query 541 GAATTCCATGTTCCCTGAGGTTGACAGCACTTGGAAAACTTTCAATGCAGTGCAAAAGCT 600 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 547 AAATTCCATGTTCCCTGAGGTTGACAGCACCTGGAAAACTTTCAATGCTGTGCAAAAGCT 606 Query 601 ACTCAGCAAAACCAATGGGAAGCTTGTTGGAGATTTAATGACACCGGCTCCACTAGTTGT 660 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 607 ACTCAGCAAAACCAATGGGAAGCTTGTTGGAGATTTAATGACACCAGCTCCACTAGTTGT 666 Query 661 TGAGGAAAAAACCAACCTCGAAGATGCTGCTAAAATATTGCTTGAGACAAAATATCGCCG 720 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 667 TGAGGAAAAAACCAACCTGGAAGATGCTGCTAAAATATTGCTTGAGACAAAATATCGCCG 726 Query 721 GCTCCCTGTGGTAGATTCTGATGGCAAATTGGTCGGTATTATCACAAGAGGAAACGTGGT 780 ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 727 GCTCCCTGTGGTAGATTCTGATGGCAAATTGGTTGGTATCATCACAAGAGGAAACGTGGT 786 Query 781 TAGAGCCGCGCTTCAAATAAAGCGTTCTGGTGATAGGAATGCTTGATTAAG--A-TATAT 837 |||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||| Sbjct 787 TAGAGCCGCGCTTCAAATAAAGCGCTCTGGTGATAGGAATGCTTGATTAAGGTAGTATAT 846 Query 838 ATCAC-AAAGAAGAAAATAGCTTTGTAGAAGAAAGCAATGATCAAACCTTCTCCAGAGAA 896 || || ||| |||||||| |||||||||| ||||||||||||||||| |||||||||||| Sbjct 847 AT-ACCAAACAAGAAAATGGCTTTGTAGAGGAAAGCAATGATCAAACATTCTCCAGAGAA 905 Query 897 TAAAAGTGAGAAACCGTGACAATTGTATCATGTATTAGTAGAATAAGAACCATAACTTGT 956 |||||||||||||||| |||||||||| |||||||||| | | ||||| ||||||||| | Sbjct 906 TAAAAGTGAGAAACCGCGACAATTGTACCATGTATTAG-A-A-TAAGAGCCATAACTTAT 962 Query 957 ATTACAGTTTGCATCGAAGTTAAGCCTGCCTAGTAATCTCGAGAAGAATCAAAGGTAAGT 1016 | ||| |||||| ||||||||| |||| || || ||| ||||| ||||||||||||| Sbjct 963 ACGACATTTTGCAACGAAGTTAAACCTGG-TA--AA-CTCTAGAAGCATCAAAGGTAAGT 1018 Query 1017 -----T-T---TTT---CTATTTTTGCAGAATCAGCTTCTCTGTTTGTTTGATGGGTTAG 1064 | | ||| ||||||| |||||||||||||||||||||||||||| ||||| Sbjct 1019 GCACATCTAACTTTTTGCTATTTTAGCAGAATCAGCTTCTCTGTTTGTTTGATAAGTTAG 1078 Query 1065 GTTATCAGATTCTTTGGGTATTTGATTCTCATCCAATTATGCTTTC-TTA-GA-AAGaaa 1121 |||||||||| |||||||||||||| ||||||||||| |||||||| || || || ||| Sbjct 1079 GTTATCAGATGCTTTGGGTATTTGACTCTCATCCAAT-ATGCTTTCATTTCGAGAA-AAA 1136 Query 1122 aaaaaaCTTGTTTC-CTACTTTCTACATTTGGTTAACCACCAAAGTAACAG-CCTTTT-A 1178 |||||| ||||||| | ||||||||||||||||||||||||||||||||| |||||| | Sbjct 1137 AAAAAA-TTGTTTCAC-ACTTTCTACATTTGGTTAACCACCAAAGTAACAAACCTTTTTA 1194 Query 1179 AGGTATTTTAATTGATTTTGGTTCAACC 1206 |||||||||||||||||||||||||||| Sbjct 1195 AGGTATTTTAATTGATTTTGGTTCAACC 1222 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 59236643100 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5