BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg490928 Length=1796 Score E Sequences producing significant alignments: (Bits) Value AT4G37120.1 | Symbols: SMP2 | Pre-mRNA splicing Prp18-interacti... 2687 0.0 AT1G65660.1 | Symbols: SMP1 | Pre-mRNA splicing Prp18-interacti... 2206 0.0 AT3G45950.1 | Symbols: | Pre-mRNA splicing Prp18-interacting f... 542 5e-153 > AT4G37120.1 | Symbols: SMP2 | Pre-mRNA splicing Prp18-interacting factor | chr4:17486647-17489294 FORWARD LENGTH=1814 Length=1814 Score = 2687 bits (1455), Expect = 0.0 Identities = 1698/1813 (94%), Gaps = 26/1813 (1%) Strand=Plus/Plus Query 1 GAAGCTTAACGATCGTAATAATCATGGCGACGGCTTCAGTTGCTTTTAAGTCTAGGGAAG 60 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 10 GAAGCTTAACGATCGTAACAATCATGGCGACGGCTTCAGTTGCTTTTAAGTCTAGGGAAG 69 Query 61 ATCATAGGAAGAAATTAGAATTAGAGGAAGCTCGTAAAGCTGGTCTTGCTCCTGCTGAGG 120 |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 70 ATCACAGGAAGAAATTAGAATTAGAGGAAGCTCGTAAAGCTGGTCTCGCTCCTGCTGAGG 129 Query 121 TCGATGAGGATGGCAAAGAAATCAATCCTCACATACCTGAGTATATGTCAAAAGCTCCAT 180 | || || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 130 TAGACGAAGATGGCAAAGAAATCAATCCTCACATACCTGAGTATATGTCAAAAGCTCCAT 189 Query 181 GGTATCTCAACTCTGAAAAACCGAGTTTGAAGCATCAAAAGAATTGGAAAACTGAACCCG 240 |||||||||| |||||| | |||||||||||||||||||| |||||||||| |||||||| Sbjct 190 GGTATCTCAAGTCTGAACAGCCGAGTTTGAAGCATCAAAAAAATTGGAAAATTGAACCCG 249 Query 241 AACTCaaaaaaaTATGGTATGATAGAGGTGCAAAGATCCATCAAGCCGAAAAATACCGCA 300 ||| |||||| |||||||||||||||||| ||||||| ||||||| ||| ||||||||| Sbjct 250 AACCCAAAAAGATATGGTATGATAGAGGTAAAAAGATCTATCAAGCTGAACAATACCGCA 309 Query 301 AGGGAGCGTGTATAAACTGTGGTGCAATGACGCACAGTTCTAAAGCATGTATGGATAGAC 360 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 310 AGGGAGCGTGTATAAACTGTGGTGCAATGACTCACAGTTCTAAAGCATGTATGGATAGAC 369 Query 361 CTCGTAAGATTGGAGCTAAATACACAAACATGAACATTGCAGCTGATGAGAAAATCGAGA 420 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 370 CTCGTAAGATTGGAGCTAAATACACAAACATGAACATTGCTGCTGATGAGAAAATCGAGA 429 Query 421 GTTTTGAACTTGACTATGATGGCAAGAGAGACAGATGGAATGGTTATGATCCTTCATCCT 480 |||||||||||||||||||||| ||||| ||||||||||| ||||||||| ||||| ||| Sbjct 430 GTTTTGAACTTGACTATGATGGGAAGAGGGACAGATGGAACGGTTATGATACTTCAACCT 489 Query 481 ACCGTCATGTGGTAGATCGTTATGATGCAAAAGAGGAGGCACGAAAGAAGTATCTCAAGG 540 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 490 ACCGTCATGTGGTAGATCGTTATGATGCTAAAGAGGAGGCACGAAAGAAGTATCTCAAGG 549 Query 541 AGCAGCAACTTAAGAAACTAGAGGAGAAGAACAATAATGAAAACGGTGATGATGCAACCA 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 550 AGCAGCAACTTAAGAAACTAGAGGAGAAGAACAATAATGAAAACGGTGATGATGCAACCA 609 Query 601 GTGATGGGGAGGAATACAATGACGACTTAAGGGTCGATGAAGCCAAGGTTGATGAGAGCA 660 |||||||||||||| || ||||||||| |||||||||||||| |||||||||||||| | Sbjct 610 GTGATGGGGAGGAAGACCTTGACGACTTGAGGGTCGATGAAGCTAAGGTTGATGAGAGTA 669 Query 661 GGCAGATGGATTTTGCAAAGGTTGAAAAACGTGTTCGAACAACTGGTGGTGGTAGCACAG 720 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 670 GGCAAATGGATTTTGCAAAGGTTGAGAAACGTGTTCGAACAACTGGTGGTGGTAGCACAG 729 Query 721 GAACTGTTAGGAATCTGCGTATCAGAGAAGACACTGCAAAATACCTGTTGAATCTTGATG 780 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 730 GAACTGTTAGGAATCTGCGTATCAGAGAAGACACTGCTAAATACCTGTTGAATCTTGATG 789 Query 781 TCAACTCAGCTCATTATGACCCGAAAACTCGATCCATGCGTGAAGATCCACTTCCAGATG 840 | |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct 790 TAAACTCAGCTCATTATGACCCTAAAACTCGGTCCATGCGTGAAGATCCACTTCCAGATG 849 Query 841 CAGATCCAAATGAAAAATTCTATTTGGGAGATAATCAATATAGAAACAGTGGCCAAGCTT 900 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 850 CAGATCCAAATGAAAAATTCTATTTGGGAGATAATCAATATAGAAACAGTGGCCAAGCTC 909 Query 901 TGGAGTTCAAACAGCTAAACGTCCATTCATGTGAAGCATTTGACAAGGGACAGGACATGC 960 |||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct 910 TGGAGTTCAAACAGATAAACATCCATTCATGTGAAGCATTTGACAAGGGACATGACATGC 969 Query 961 ATATGCAAGCGGCTCCTTCCCAAGCTGAATTGCTCTATAAGAACTTTAAAGTTGCAAAGG 1020 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 970 ATATGCAAGCGGCTCCATCCCAAGCTGAATTGCTCTATAAGAACTTTAAAGTTGCAAAGG 1029 Query 1021 AAAAACT-AAAATCTCAGACAAAAGACACAATCATGGAAAAGTACGGGAATGCAGCTACC 1079 ||||||| |||| |||||||||| ||||| || ||||||||||| |||||||||||||| Sbjct 1030 AAAAACTGAAAA-CTCAGACAAAGGACACCATTATGGAAAAGTATGGGAATGCAGCTAC- 1087 Query 1080 A-AAGGTGAAATTCCGATGGAGCTTTTGCTTGGCCAAAGTGAAAGACAAGTTGAGTATGA 1138 | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1088 AGAAGGTGAAATTCCGATGGAGCTTTTGCTTGGCCAAAGTGAAAGACAAATTGAGTATGA 1147 Query 1139 CAGGGCAGGCAGGATTATAAAGGGACAGGAGGTGATAATTCCAAAGAGCAAATATGAAGA 1198 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1148 CAGGGCAGGGAGGATTATGAAGGGACAGGAGGTGATAATTCCAAAGAGCAAATATGAAGA 1207 Query 1199 AGATGTTCATGCCAACAATCACACAAGTGTTTGGGGTTCATGGTGGAAAGACCATCAGTG 1258 |||||||||||| ||||||||||||||||||||||| |||||||||||||| || || || Sbjct 1208 AGATGTTCATGCTAACAATCACACAAGTGTTTGGGGATCATGGTGGAAAGATCACCAATG 1267 Query 1259 GGGATATAAATGCTGCCAGCAGACCATTCGCAACAGCTACTGCACAGGTTCTGCTGGAAT 1318 |||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 1268 GGGATATAAATGTTGCCAGCAGACAATTCGCAACAGCTATTGCACAGGTTCTGCTGGAAT 1327 Query 1319 TGAAGCTGCAGAGGCGTCCCTTGATCTGATGAAGGCTAATATTGCTCGCAAAGAAGCTTC 1378 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1328 TGAAGCTGCAGAGGCGTCCATTGATCTGATGAAGGCTAATATTGCTCGCAAAGAAGCTTC 1387 Query 1379 TAAAGAGAGTCCGAAGAAGGTTGAAGAGAAGAGAATGGCGACATGGGGAACCGATATTCC 1438 |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct 1388 TAAAGAGAGTCCGAAGAAGGTTGAAGAGAAGAAAATGGCGACATGGGGAACTGATATTCC 1447 Query 1439 TGAAGATTTGGAATTGAACGAGGAGGCTCTTGCCAATGCTCTTAAAAAGGAGGATCTAAG 1498 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 1448 TGAAGATTTGGAATTGAACGAGGAGGCACTTGCAAATGCTCTTAAAAAGGAGGATCTAAG 1507 Query 1499 TAAGAGGGAAGAAAAAGATGAGAGGAAACGCAAATACAATGTCAAATACACCAACGATGT 1558 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1508 TAGGAGGGAAGAAAAAGATGAGAGGAAACGCAAATACAATGTCAATTACACCAACGATGT 1567 Query 1559 GACTTCGGAAGATATGGAAGCTTATAGAATGAAGAGAGTTCACCATGAGGATCCAATGA- 1617 ||| || || || ||||||||||| |||||||||||||||||||| ||||| ||||||| Sbjct 1568 GACCTCCGAGGAGATGGAAGCTTACAGAATGAAGAGAGTTCACCACGAGGACCCAATGAG 1627 Query 1618 AAGATTTCCTCGGCTGATTTAAAC-TCTTT-CCCTTTCACCATATTAACCTGAAGAAACC 1675 || |||||| |||||||| ||| ||||| ||||||||||||||||| ||||||||||| Sbjct 1628 AA-ATTTCCCCGGCTGAT--AAATGTCTTTTCCCTTTCACCATATTAAGCTGAAGAAACC 1684 Query 1676 TTATTTTTTA-----A-GTCTTTAAATAAGAGACCTTTCTTATTCATATCATTATTTGTT 1729 || ||||| | | |||||||||||||| |||| |||||||| |||||||||||| Sbjct 1685 TTGTTTTTAAGTTTCATGTCTTTAAATAAGAC-CCTTG-TTATTCATGTCATTATTTGTT 1742 Query 1730 A--GTCTTCAAGATTCATT-AT-GATT--TTAACAAAACTTATGAAACTAGAATAAAATT 1783 | ||||||| | | || | |||| ||| | ||| ||||||||||||||||| || Sbjct 1743 ACTGTCTTCATG-TCCACCCAAAGATTCATTAT-ATAACGTATGAAACTAGAATAAATTT 1800 Query 1784 TCTTAGCCAAATC 1796 ||||||||||||| Sbjct 1801 TCTTAGCCAAATC 1813 > AT1G65660.1 | Symbols: SMP1 | Pre-mRNA splicing Prp18-interacting factor | chr1:24418107-24421292 REVERSE LENGTH=1857 Length=1857 Score = 2206 bits (1194), Expect = 0.0 Identities = 1530/1690 (91%), Gaps = 31/1690 (2%) Strand=Plus/Plus Query 1 GAAGCTTAACGATCGTAATAATCATGGCGACGGCTTCAGTTGCTTTTAAGTCTAGGGAAG 60 ||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 40 GAAGCTTCACGATCGT-ATAATAATGGCGACGGCTTCAGTTGCTTTTAAGTCTAGGGAAG 98 Query 61 ATCATAGGAAG-AAATTAGAATTAGAGGAAGCTCGTAAAGCTGGTCTTGCTCCTGCTGAG 119 | ||||||||| ||||| ||||||||||||||||||||||| || |||||||| |||||| Sbjct 99 ACCATAGGAAGCAAATT-GAATTAGAGGAAGCTCGTAAAGCCGGGCTTGCTCCAGCTGAG 157 Query 120 GTCGATGAGGATGGCAAA-GAAATCAATCCTCACATACCTG-AGTATATGTCAAAAGCTC 177 || ||||||||||| ||| ||||| |||||||| || || | ||||||||||| |||| Sbjct 158 GTTGATGAGGATGG-AAAGGAAATTAATCCTCATATTCC-GCAGTATATGTCATCTGCTC 215 Query 178 CATGGTATCTCAACTCTGAAAAACCGAGTTTGAAGCATCAAAAGAATTGGAAAACTGAAC 237 |||||||||| || |||||||||||||||||||||||||||| ||| ||||| | ||| | Sbjct 216 CATGGTATCTTAATTCTGAAAAACCGAGTTTGAAGCATCAAAGGAAATGGAAGAGTGATC 275 Query 238 CCGAACTCa-aaaaaaT-ATGGTATGATAGAGGTGCAAAGATCCATCAAGCCGAAAAATA 295 || || | | | || | |||||||||||||||||||||||| |||||| |||||||| Sbjct 276 CC-AA-TTACACTAAGTCGTGGTATGATAGAGGTGCAAAGATCTTTCAAGCTGAAAAATA 333 Query 296 CCGCAAGGGAGCGTGT-ATAAACTGTGGTGCAATGACGCACAGTTCTAAAGCATGTATGG 354 |||||||||||||||| | ||||||||||||||||||||| | | ||||||| ||||||| Sbjct 334 CCGCAAGGGAGCGTGTCA-AAACTGTGGTGCAATGACGCATACTGCTAAAGCTTGTATGG 392 Query 355 ATAGACCTCGTAAGATTGGAGCTAAATACACAAACATGAACATTGCAGCTGATGAGAAAA 414 |||| |||||||||||||| || || ||||||||||||||||||||| |||||||||||| Sbjct 393 ATAGGCCTCGTAAGATTGGGGCGAAGTACACAAACATGAACATTGCACCTGATGAGAAAA 452 Query 415 TCGAGAGTTTTGAACTTGACTATGATGGCAAGAGAGACAGATGGAATGGTTATGATCCTT 474 | || ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct 453 TTGAAAGTTTTGAACTTGACTACGATGGCAAGAGGGACAGATGGAATGGTTATGATCCTT 512 Query 475 C-ATCCTACCGTCATGTGGTAGATCGTTATGATGCAAAAGAGGAGGCACGAAAGAAGTAT 533 | | |||||| || |||| |||||| |||||| ||||||||||| |||||||||||||| Sbjct 513 CGA-CCTACCATCGTGTGATAGATCTTTATGAAGCAAAAGAGGATGCACGAAAGAAGTA- 570 Query 534 C-TCAAGGAGCAGCAACTTAAGAAACTAGAGGAGAAGAACAATAATGAAAACGGTGATGA 592 | | ||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| Sbjct 571 CTTGAAGGAGCAGCAACTTAAGAAACTTGAGGAGAAAAACAATAATGAAAAAGGTGATGA 630 Query 593 TGCAACCAGTGATGGGGAGGAATAC-AATGACGACTTAAGGGTCGATGAAGCCAAGGTTG 651 ||||| ||||||||||| ||| || || || ||||||||||| |||||||||||||||| Sbjct 631 TGCAAATAGTGATGGGGAAGAAGACGAA-GATGACTTAAGGGTTGATGAAGCCAAGGTTG 689 Query 652 ATGAGAGCAGGCAGATGGATTTTGCAAAGGTTGAAAAACGTGTTCGAACAACTGGTGGTG 711 ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct 690 ATGAGAGCAGGCAGATGGATTTTGCAAAGGTTGAAAAGCGTGTTAGAACAACTGGTGGTG 749 Query 712 GTAGCACAGGAACTGTTAGGAATCTGCGTATCAGAGAAGACACTGCAAAATACCTGTTGA 771 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 750 GTAGCACAGGAACGGTTAGGAATCTGCGTATCAGAGAAGACACTGCAAAATACCTGTTGA 809 Query 772 ATCTTGATGTCAACTCAGCTCATTATGACCCGAAAACTCGATCCATGCGTGAAGATCCAC 831 | || |||||||||||||||||||||||||| |||||||| || ||||||||||| |||| Sbjct 810 ACCTCGATGTCAACTCAGCTCATTATGACCCTAAAACTCGTTCTATGCGTGAAGACCCAC 869 Query 832 TTCCAGATGCAGATCCAAATGAAAAATTCTATTTGGGAGATAATCAATATAGAAACAGTG 891 |||||||||||||||||||||| || || ||| |||||||||||||||||||||| |||| Sbjct 870 TTCCAGATGCAGATCCAAATGACAAGTTTTATCTGGGAGATAATCAATATAGAAATAGTG 929 Query 892 GCCAAGCTTTGGAGTTCAAACAGCTAAACGTCCATTCATGTGAAGCATTTGACAAGGGAC 951 ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct 930 GCCAAGCTTTGGAGTTCAAACAGCTAAACATCCATTCATGGGAAGCATTTGACAAGGGAC 989 Query 952 AGGACATGCATATGCAAGCGGCTCCTTCCCAAGCTGAATTGCTCTATAAGAACTTTAAAG 1011 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | | Sbjct 990 AGGACATGCATATGCAAGCGGCTCCTTCCCAAGCTGAATTGCTCTATAAGAGCTTTCAGG 1049 Query 1012 TTGCAAAGGAAAAACTAAAATCTCAGACAAAAGACACAATCATGGAAAAGTACGGGAATG 1071 |||||||||| ||||| |||||||||||||| |||||||||||||| ||||||||||||| Sbjct 1050 TTGCAAAGGAGAAACTGAAATCTCAGACAAAGGACACAATCATGGACAAGTACGGGAATG 1109 Query 1072 CAGCTACCA-AAGGTGAAATTCCGATGGAGCTTTTGCTTGGCCAAAGTGAAAGACAAGTT 1130 ||||||| | ||| ||||||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct 1110 CAGCTAC-AGAAGATGAAATTCCAATGGAGCTTTTACTTGGGCAAAGCGAAAGGCAAGTT 1168 Query 1131 GAGTATGACAGGGCAGGCAGGATTATAAAGGGACAGGAGGTGATAATT-CCAAAGAGCAA 1189 ||||||||| | ||||| ||||||||||| ||||||||||||||| || |||||||| || Sbjct 1169 GAGTATGACCGAGCAGGGAGGATTATAAAAGGACAGGAGGTGATA-TTGCCAAAGAGTAA 1227 Query 1190 ATATGAAGAAGATGTTCATGCCAACAATCACACAAGTGTTTGGGGTTCATGGTGGAAAGA 1249 ||||||||||||||||||||| ||||||||||| ||||| ||||| |||| |||||||| Sbjct 1228 ATATGAAGAAGATGTTCATGCTAACAATCACACTAGTGTGTGGGGATCATATTGGAAAGA 1287 Query 1250 CCATCAGTGGGGATATAAATGCTGCCAGCAGACCATTCGCAACAGCTACTGCACAGGTTC 1309 ||||| |||||||||||||| |||||||||| ||||||||| || |||||||||||||| Sbjct 1288 TCATCAATGGGGATATAAATGTTGCCAGCAGATCATTCGCAATAGTTACTGCACAGGTTC 1347 Query 1310 TGCTGGAATTGAAGCTGCAGAGGC-GTCCCTTGATCTGATGAAGGCTAATATTGCTCGCA 1368 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct 1348 TGCTGGAATTGAAGCTGCAGAGGCTG-CCCTTGATCTGATGAAGGCTAATATTGCTCGCA 1406 Query 1369 AAGAAGCTTCTAAAGAGAGTCCGAAGAAGGTTGAAGAGAAGAGAATGGCGACATGGGGAA 1428 ||||||| || ||||||| || ||||||||||||||||||||||||||| ||||||||| Sbjct 1407 AAGAAGCAACTGAAGAGAGCCCAAAGAAGGTTGAAGAGAAGAGAATGGCGTCATGGGGAA 1466 Query 1429 CCGATATTCCTGAAGATTTGGAATTGAACGAGGAGGCTCTTGCCAATGCTCTTAAAAAGG 1488 | |||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||| Sbjct 1467 CTGATATTCCTGAAGATTTGGAGTTGAACGAGGAGGCACTTGCTAATGCTCTTAAAAAGG 1526 Query 1489 AGGATCTAAGTAAGAGGGAAGAAAAAGATGAGAGGAAACGCAAATACAATGTCAAATACA 1548 ||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1527 AGGATCTCAGTAGGAGGGAAGAGAAAGATGAGAGGAAACGCAAATACAATGTCAAATACA 1586 Query 1549 CCAACGATGTGACTTCGGAAGATATGGAAGCTTATAGAATGAAGAGAGTTCACCATGAGG 1608 ||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct 1587 ACAACGATGTGACTCCGGAAGAGATGGAAGCTTACAGAATGAAGAGAGTTCACCATGAGG 1646 Query 1609 ATCCAATGAAAGATTTCCTCGGCT-GAT-TTAAACTCT--TTCCCTTTCACCATATTAAC 1664 |||||||||||||||||||| | || || || | |||||||| ||||| | ||| Sbjct 1647 ATCCAATGAAAGATTTCCTCTGAAAGAAGTTGG-CTTTCATTCCCTTTTACCATGT-AAC 1704 Query 1665 CTGAAGAAAC 1674 |||||||||| Sbjct 1705 CTGAAGAAAC 1714 > AT3G45950.1 | Symbols: | Pre-mRNA splicing Prp18-interacting factor | chr3:16889461-16890618 REVERSE LENGTH=1158 Length=1158 Score = 542 bits (293), Expect = 5e-153 Identities = 477/563 (85%), Gaps = 23/563 (4%) Strand=Plus/Plus Query 24 ATGGCGACGGCTTCAGTTGCTTTTAAGTCTAGGGAAGATCATAGGAAG-AAATTAG-AAT 81 ||||||||||||||||||||||||||||||||| |||||||||||||| ||| || ||| Sbjct 1 ATGGCGACGGCTTCAGTTGCTTTTAAGTCTAGGAAAGATCATAGGAAGCAAA--AGGAAT 58 Query 82 TAGAGGAAGCTCGTAAAGCTGGTCTTGCTCCTGCTGAGGTCGATGAGGATGGCAAAG-AA 140 ||||||||||||||||||| || |||||||| |||||||| || |||| ||| |||| || Sbjct 59 TAGAGGAAGCTCGTAAAGCCGGGCTTGCTCCGGCTGAGGTAGACGAGGGTGG-AAAGGAA 117 Query 141 ATCAATCCTCACATACCTGAGTATATGTCAAAAGCTCCATGGTAT-CTCAACTCTGAAAA 199 ||||||| |||||||||| ||||| || ||| |||||| ||| | ||| |||||||| Sbjct 118 ATCAATCTTCACATACCTAAGTATTTGACAATTCCTCCATTATATGC-CAAGTCTGAAAA 176 Query 200 ACCGAGTTTGAAGCATCAAAAGAATTGGAAAACTGAACCCGAACTCaaaaaaaT-ATGGT 258 |||||| ||||||||||||||||||||||||||| |||||| || | || || || | Sbjct 177 ACCGAGCTTGAAGCATCAAAAGAATTGGAAAACTAAACCCGTT-TCCACAACATCATATT 235 Query 259 ATGATAGAGGTGCAAAGA-TCCATCAAGCCGAAAAATACCGCAAGGGAGCGTGT-ATAAA 316 |||| |||||||||||| | ||||||||||||| || || || ||||||||| | ||| Sbjct 236 ATGACCGAGGTGCAAAGACTT-ATCAAGCCGAAAAGTATCGGAAAGGAGCGTGTCA-AAA 293 Query 317 CTGTGGTGCAATGACGCACAGTTCT-AAAGCATGTATGGATAGACCTCGTAAGATTGGAG 375 |||||||||||||||||| | | | ||| |||||||||| |||||||||||| |||| | Sbjct 294 CTGTGGTGCAATGACGCAT-GATGTGAAAACATGTATGGAAAGACCTCGTAAGGTTGGTG 352 Query 376 CTAAATACACAAACATGAACATTGCAGCTGATGAGAAAATCGAGAGTTTTGAACTTGACT 435 | ||||||||| ||| ||||||||| |||||||||||||||||||| ||||| |||||| Sbjct 353 CAAAATACACAGACAAAAACATTGCACCTGATGAGAAAATCGAGAGTCTTGAATTTGACT 412 Query 436 ATGATGGCAAGAGAGACAGATGGAATGGTTATGATCCTTCATCCTACCGTCATGTG-GTA 494 |||||||||| || ||| |||||||||||||||||||||| || || |||||||| | | Sbjct 413 ATGATGGCAAAAGGGACCGATGGAATGGTTATGATCCTTCGTCTTATTGTCATGTGAG-A 471 Query 495 GATCGTTATGATGCAAAAGAGGAGGCACGAAAGAAGTATCTCAAGGAGCAGCAACTTAA- 553 |||||| |||| ||||||||| | |||||| ||||||| || || ||||| ||||| || Sbjct 472 GATCGTCATGAAGCAAAAGAGAATGCACGAGAGAAGTACCTGAACGAGCAACAACT-AAT 530 Query 554 -G--AAACTAGAGGAGAAGAACA 573 | ||||||||||||||||||| Sbjct 531 TGCGAAACTAGAGGAGAAGAACA 553 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 88854964650 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5