BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg490964 Length=1741 Score E Sequences producing significant alignments: (Bits) Value AT4G36700.1 | Symbols: | RmlC-like cupins superfamily protein ... 2475 0.0 > AT4G36700.1 | Symbols: | RmlC-like cupins superfamily protein | chr4:17298200-17300367 REVERSE LENGTH=1842 Length=1842 Score = 2475 bits (1340), Expect = 0.0 Identities = 1519/1605 (95%), Gaps = 13/1605 (1%) Strand=Plus/Plus Query 1 AAAAAACAGAGCACAATGACTAGATTTACGGTATTGCCActctctgttcttcttcttctc 60 ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct 16 AAAAAACAGAGCACAATGACTAGATTTGCGGTATTGCCACTCTCTG---TTCTTCTTCTC 72 Query 61 gttctcttgttcctctGCACTGAGTCATTGGCTAAGTCGGAGGATTCGGAAGAAAACGAC 120 |||||||||||||||||||||||||| ||||||||||||||||| || |||||| ||||| Sbjct 73 GTTCTCTTGTTCCTCTGCACTGAGTCGTTGGCTAAGTCGGAGGAGTCTGAAGAATACGAC 132 Query 121 TTCCCCGTGCCGTCGTGCTGCGGGTTTTCGTCTCCTCTTCTGATAAAGAAAGATCAATGG 180 || | ||||| || || |||||||||||||||||||||||||| ||||||||||||||| Sbjct 133 GTCGCTGTGCCTTCATGTTGCGGGTTTTCGTCTCCTCTTCTGATTAAGAAAGATCAATGG 192 Query 181 AAACCAATCTTCGAGTCGAAGTTCGGACAGATCTCAACCGTACAAATCGGCAATGGATGC 240 ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 193 AAACCAATCTTCGAGACGAAGTTTGGACAGATCTCAACCGTTCAAATCGGCAATGGATGC 252 Query 241 GGTGGAATGGGACCTTACAAAATACATTCCATAACGTTGGAGCCAAACACGCTTTTGCTG 300 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 253 GGTGGAATGGGACCTTACAAGATACATTCCATAACGTTGGAGCCAAACACAATTTTGCTC 312 Query 301 CCTCTTCTTCTTCATTCCGACATGGTCTTCTTCGTTGACTCTGGAAGTGGGATTCTGAAT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 313 CCTCTTCTTCTTCATTCCGACATGGTCTTCTTCGTTGACTCTGGAAGTGGGATTCTGAAT 372 Query 361 TGGGTTGACGAGGAAGCGAAGAGTTCTGAGATCAGACTAGGGGACGTTTACAGGCTACGT 420 |||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||| Sbjct 373 TGGGTTGACGAGGAAGCGAAGAGTACCGAGATCAGACTAGGAGACGTTTACAGGCTACGT 432 Query 421 CCCGGTTCGGTTTTCTACTTACAGAGCAAACCGGTTGATATTTTCCTTGGAACCAAACTT 480 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 433 CCCGGTTCGGTTTTCTACTTACAGAGCAAACCGGTGGATATCTTCCTTGGAACCAAACTT 492 Query 481 AGGCTTTACGCAATCTTCTCCAACAACGAGGAGTGTTTACATGATCCTTGCTTTGGTGCG 540 | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 493 AAGCTTTACGCAATCTTCTCCAACAACGATGAGTGTTTACATGATCCTTGCTTTGGTGCC 552 Query 541 TATTCAAGTATTACAGATCTAATGTTTGGTTTTGATGAGACAATTCTCCAGTCAGCTTTT 600 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 553 TATTCGAGTATCACAGATCTAATGTTTGGTTTTGATGAGACAATTCTCCAGTCAGCTTTT 612 Query 601 GGGGTTCCCGAGGGGATTATAGAGCTGATGAGGAATCGTACGAAGCCACCATTGATCGTG 660 |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 613 GGGGTTCCTGAGGGGATTATAGAGCTGATGAGGAACCGTACGAAGCCACCATTGATCGTG 672 Query 661 AGTGATG-TGCTTTGCCCACCAGGTGTGGCTAACACATGGCAGCTCCAACCGCGATTACT 719 ||||| | ||||||| ||||||||||||| ||||| ||||||||||||||||||||||| Sbjct 673 AGTGA-GACGCTTTGCACACCAGGTGTGGCCAACACTTGGCAGCTCCAACCGCGATTACT 731 Query 720 CAAA-TTCTTTGCTGGAAGCGCAGATTTGGTGGATAACaagaagaagaaagagaagaagg 778 ||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||| | Sbjct 732 -AAAGCTCTTTGCTGGAAGTGCAGACTTGGTGGATAACAAGAAGAAGAAAGAGAAGAAAG 790 Query 779 agaagaaagagaaggtgaagaaagcaaagaCATTCAATGTTTTCGAATCCGAACCGGATT 838 ||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct 791 AGAAGAAGGAGAAGGTGAAGAAAGCGAAGACATTCAATGTTTTCGAATCTGAACCGGATT 850 Query 839 TCGAGAGCCCTTACGGTCGTACTATAACGATTAATAGGAAGGATCTGAAAGTTTTAAAGG 898 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct 851 TCGAGAGCCCCTACGGTCGTACTATAACGATTAACAGGAAGGATCTGAAAGTTTTAAAAG 910 Query 899 GCTCAATGGTTGGAGTTTCCATGGTGAATCTCACTCAAGGGTCGATGATGGGACCACACT 958 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct 911 GCTCAATGGTTGGAGTTTCCATGGTGAATCTCACTCAAGGATCGATGATGGGACCGCACT 970 Query 959 GGAATCCATGGGCTTGCGAGATTTCAATTGTGTTGAAAGGAGCAGGAATGGTTAAGGTGC 1018 ||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| | Sbjct 971 GGAATCCATGGGCTTGCGAGATTTCGATTGTATTGAAAGGAGCAGGAATGGTTAGGGTTC 1030 Query 1019 TTAGGTCTTCGATATCATCAAACTCATCATCAGAGTGTAAGAACGTGAGGTTTAAGGTAG 1078 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| Sbjct 1031 TTAGGTCTTCGATATCATCAAACACATCATCAGAGTGTAAGAACGTGAGGTTTAAAGTAG 1090 Query 1079 AAGAAGGAGATATTTTCGCAGTTCCACGGTTACATCCAATGGCTCAAATGTCATTCAACA 1138 | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1091 AGGAAGGAGATATTTTCGCAGTTCCACGGTTACATCCAATGGCTCAAATGTCTTTCAACA 1150 Query 1139 ATGGCTCGTTAGTGTTCGTTGGGTTTACTACTTCAGCTAAGAATAACGAGCCGCAGTTCT 1198 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1151 ATGACTCGTTAGTGTTCGTTGGGTTTACTACTTCAGCTAAGAATAACGAGCCGCAGTTCT 1210 Query 1199 TAGCCGGGGAGGACTCGGCTTTGCGGATGCTTGACCGGCAAGTATTGGCTGCGTCGCTTA 1258 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1211 TAGCCGGGGAGGACTCGGCTTTGCGGATGCTTGACCGGCAAGTATTGGCTGCATCGCTTA 1270 Query 1259 ACGTGAGTAGTGTGATGATTGATGGATTGTTGGGAGCTCAGAAGGAAGCTGTTATCTTGG 1318 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1271 ATGTGAGTAGTGTGACGATTGATGGATTGTTGGGAGCTCAGAAGGAAGCTGTTATCTTGG 1330 Query 1319 AATGTCCTTCTTGTGCGGAAGGAGAGATGGAGAAGCTTAAGGTggagacggagacgaaga 1378 |||||| ||||||||||||||||||||| ||||||||||||||||||| |||| ||||| Sbjct 1331 AATGTCATTCTTGTGCGGAAGGAGAGATAGAGAAGCTTAAGGTGGAGATAGAGAGGAAGA 1390 Query 1379 aaatagatgatgagaggaagaggagagatgatgaaaggaagaaagaagaagaagaggcga 1438 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1391 AAATAGATGATGAGAGGAAGAGGAGACATGATGAAAGGAAGAAAGAAGAAGAAGAGGCGA 1450 Query 1439 agaaagaagaggaagagaggaggaaacgtgaagaagaagaagagaggaagCGGTGGCCAC 1498 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1451 AGAGAGAAGAGGAAGAGAGGAGGAAACGTGAAGAAGAAGAAGAGAAGAAGCGGTGGCCAC 1510 Query 1499 CTCAACAGCCACCACAACAAGAAGAACCTCTAG--AACCGCAACTACCGATGGAGAAAGA 1556 ||||||| ||||||||| ||||||||| | ||| ||| ||||||||||||||||||||| Sbjct 1511 CTCAACAACCACCACAAGAAGAAGAAC-T-TAGGGAACGGCAACTACCGATGGAGAAAGA 1568 Query 1557 ATGGGAAATGGCAGGTGAAGAGGAGATGT-AAGCCGTAGAAGTAA 1600 ||||||||||| |||||||||||||| || |||||| || ||||| Sbjct 1569 ATGGGAAATGGAAGGTGAAGAGGAGA-GTTAAGCCGGAGGAGTAA 1612 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 86093934675 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5