BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg490979
Length=1869
Score E
Sequences producing significant alignments: (Bits) Value
AT4G36580.1 | Symbols: | AAA-type ATPase family protein | chr4... 1578 0.0
AT2G18330.1 | Symbols: | AAA-type ATPase family protein | chr2... 824 0.0
> AT4G36580.1 | Symbols: | AAA-type ATPase family protein | chr4:17257945-17260775
FORWARD LENGTH=2026
Length=2026
Score = 1578 bits (854), Expect = 0.0
Identities = 937/978 (96%), Gaps = 2/978 (0%)
Strand=Plus/Plus
Query 893 GGATGCTTGGACAACCATCACTTATTCGAGAATCTTCCATGGGTAGATTTCCATGGGCAG 952
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||
Sbjct 936 GGATGCTTGGACAACCGTCACTTATTCGAGAATCTTCCATGCGTAGATTTCCATGGACAG 995
Query 953 GCTCAATGTCTCAATTGAAGAACAGAATCTCAGGTGCAGCAGCAGCATCTGCAGCAGAAG 1012
||||| |||||||||| |||||||| |||||||| || |||||||| |||||||||||||
Sbjct 996 GCTCAGTGTCTCAATTTAAGAACAGGATCTCAGGGGCTGCAGCAGCTTCTGCAGCAGAAG 1055
Query 1013 GGAAAAAGCCACTTGATAATGTAATTCTCCATACTTCTTTGAAGAAACGAATCGAGCATC 1072
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1056 GCAAAAAGCCGCTTGATAATGTAATTCTCCATACTTCTTTGAAGAAACGAATCGAGCGTC 1115
Query 1073 TCGCTAGAGCTACAGCAAATACCAAATCCCATCAAGCACCATTCCGCAACATGATGTTTT 1132
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1116 TCGCTAGAGCTACAGCAAACACCAAATCCCATCAAGCACCATTCCGCAACATGATGTTTT 1175
Query 1133 ATGGACCTCCTGGTACCGGTAAAACTATGGTCGCAAGGGAAATAGCTCGAAAATCGGGTC 1192
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 1176 ATGGACCTCCTGGTACCGGTAAAACTATGGTGGCAAGGGAAATAGCTCGGAAATCGGGTC 1235
Query 1193 TGGATTATGCTATGATGACAGGTGGAGATGTTGCTCCCTTGGGATCACAAGCTGTTACTA 1252
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 1236 TGGATTATGCTATGATGACAGGAGGTGATGTTGCTCCCTTGGGATCACAAGCTGTTACTA 1295
Query 1253 AAATCCATCAGATATTTGATTGGGCCAAGAAATCGAACAAAGGCTTACTTCTTTTCATTG 1312
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1296 AAATCCATCAGATATTTGATTGGGCTAAGAAATCGAACAAAGGCTTACTTCTTTTCATTG 1355
Query 1313 ATGAAGCCGATGCTTTTCTATGCAG-GCGTAACAGCACTTACATGAGTGAGGCTCAACGT 1371
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 1356 ATGAAGCCGATGCTTTTCTATGC-GAGCGTAACAGCACTTACATGAGTGAGGCTCAACGT 1414
Query 1372 AGTGCTCTGAATGCTTTGCTCTTCCGAACCGGTGATCAATCTCGGGACATTGTTCTTGTC 1431
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1415 AGTGCTCTGAACGCTTTGCTCTTCCGAACTGGTGATCAATCTCGGGACATTGTTCTTGTC 1474
Query 1432 TTAGCTACAAACAGACCTGGAGATCTCGATAGTGCGGTTACAGACAGGATTGATGAAGTC 1491
|| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1475 TTGGCTACAAACAGACGTGGAGATCTCGATAGTGCGGTTACAGACAGGATTGATGAAGTC 1534
Query 1492 ATTGAGTTCCCACTTCCAGGGGAAGAAGAACGTTTCAAGCTTCTCAATCTCTATCTCAAT 1551
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1535 ATTGAGTTCCCACTTCCAGGGGAAGAAGAACGTTTCAAGCTTCTCAATCTCTATCTCAAC 1594
Query 1552 AAATATCTAAAGAGGGGTGACAACAACAAAGACACAAAACCGAAATGGAGTCATTTGTTT 1611
||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct 1595 AAATATCTAAAGATGGGTGATAACAACGAAGACACAAAACCGAAATGGAGTCATTTGTTT 1654
Query 1612 AAGAAGCTGTCACAGAAGATTACCGTTGAAGCAGACCTAACTGATAAAGTGATTTCTGAG 1671
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct 1655 AAGAAGCTGTCACAGAAGATTACCGTTGAAGAAGACTTAACTGATAAAGTGATTTCTGAG 1714
Query 1672 GCTGCGAAGAAGACGGAAGGATTCTCTGGCCGTGAAATTGCAAAGCTTGTGGCCGGAGTA 1731
||||| |||||||| |||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 1715 GCTGCAAAGAAGACAGAAGGATTCTCTGGCCGTGAGATTGCAAAGCTTGTGGCTGGAGTA 1774
Query 1732 CAAGCTGGAGTGTACGGACGAGAGGATTGTGTATTGGATTCACAGCTTTTCAAAGAGATT 1791
|||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||
Sbjct 1775 CAAGCTGGAGTGTACGGACGAGCGGATTGTGTTTTGGATTCACAGCTTTTTAAAGAGATT 1834
Query 1792 GTTGAATATAAGGTTGAAGAACATCACCAAAGGCTTAGGCTTGCTTCTGAAGGTTTTCAA 1851
|||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||
Sbjct 1835 GTTGAATATAAGGTTGAAGAACATCACCGAAGGCATATGCTTGCTTCTGAAGGTTTTCAG 1894
Query 1852 CCATTACTCTTCTCTTAG 1869
||||||||||||||||||
Sbjct 1895 CCATTACTCTTCTCTTAG 1912
Score = 1395 bits (755), Expect = 0.0
Identities = 858/904 (95%), Gaps = 22/904 (2%)
Strand=Plus/Plus
Query 1 AAATCCATGGCTGCTTCTAGATTGTGTTCCGCGGCGGCGATAGCTGCTGCGTTCACTTCA 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8 AAATCGATGGCTGCTTCTAGATTGTGTTCCGCGGCGGCGATAGCTGCTGCGTTCACTTCA 67
Query 61 ATGTCGATGTCACAGAACCGTGCGTACGCCGA---TTCTCGATTCCGGTTTCCTTTC--- 114
||||| ||||| ||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 68 ATGTCAATGTCTCAGAACCGTGCTTACGCCGATTCTTCTCGATTCCGGTTTCCTTTCTTT 127
Query 115 TATTC-T-T-CTTCTCCTCCTCCGTCAGATTCTCCGGCGAATCAATCTTCTTCGAACTCT 171
| ||| | | ||||||||||||||||||||||||||||||||||| ||||| | ||
Sbjct 128 TCTTCTTCTCCTTCTCCTCCTCCGTCAGATTCTCCGGCGAATCAA---TCTTC--A-TC- 180
Query 172 AGTAAGTCTAAACCAGAGGCTGATGAGCCTAAAGGATCGGGTTTTGATCCTGAGTCCCTT 231
| ||||||||| ||||| ||||||||||||||||||||||||||||||||||| | |||
Sbjct 181 -G-AAGTCTAAAGCAGAGCCTGATGAGCCTAAAGGATCGGGTTTTGATCCTGAGGCTCTT 238
Query 232 GAGAGAGCTGCAAAAGCTCTTAGAGATATCAATAGCTCTCCCCATTCCAAACAGGTGTTT 291
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 239 GAGAGAGCTGCTAAAGCTCTTAGAGATATCAATAGCTCTCCCCATTCCAAGCAGGTGTTT 298
Query 292 GATCTCATGAGGAAGCAGGAGAAAACTCGGTTAGCTGAATTAGCGGCAGAGTCTTCTCAA 351
|||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 299 GATCTCATGAGGAAGCAGGAGAAAACTCGGTTAGCTGAATTAACGGCAGAGACTTCTCAT 358
Query 352 TACGAAGCTATTCAAGCACACAGA-GATATTGAG-AGACAACAGAAATTGGCTGAGGACC 409
|||||||||||||||||||||| | ||||||| | ||||| |||||||||||||||||||
Sbjct 359 TACGAAGCTATTCAAGCACACA-ATGATATTG-GCAGACAGCAGAAATTGGCTGAGGACC 416
Query 410 AGAGAAATCTTTTGCAGACACAGGCGCAAACCAAAGCGCAAATTCTGCGATATGAGGATG 469
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 417 AGAGAAATCTTTTGCAGACACAGGCGCAAACCAAAGCGCAAAATCTGCGATATGAGGATG 476
Query 470 AATTAGCCAGAAAGAGACAGCAGACAGATCATGAAGCTCAGAGACATCATAATGTGGAAT 529
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 477 AATTGGCCAGAAAGAGACAGCAGACAGATCATGAAGCTCAGAGGCATCATAATGTGGAAT 536
Query 530 TGGTTAAGATGCAAGAGGCGTCTTCTATCAGGAAAGAGAGGGCAAAAATCGCCACAGAAG 589
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 537 TGGTTAAGATGCAAGAGGCGTCTTCTATCAGGAAAGAGAAGGCAAAAATCGCCACAGAAG 596
Query 590 AACAGATCCAAGCTCAGCATCGCCAAACTGAGAAAGAGAGAGCTGAACTTGAGCGAGAGA 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 597 AACAGATCCAAGCTCAGCATCGCCAAACTGAGAAAGAGAGAGCTGAACTTGAGCGAGAGA 656
Query 650 CGATTCGTGTCAAGGCCATGGCTGAAGCTGAAGGTCGGGCTCATGAAGCCAAACTTACTG 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 657 CGATTCGTGTCAAGGCCATGGCTGAAGCTGAAGGTCGGGCTCATGAAGCCAAACTTACTG 716
Query 710 AAGAGCAAAACAGAAGATTGCTTCTGGAAAGGATTAATGGTGAAAGGGAGAAGTGGCTTG 769
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct 717 AAGAGCAAAACAGAAGATTGCTTATGGAAAGGATTAATGGTGAAAGAGAGAAGTGGCTTG 776
Query 770 CTGCAATCAACACCATGTTCAGTCACATCGAAGGGGGATTCAGGACCTTATTAACCGATC 829
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 777 CTGCAATCAACACAATGTTCAGTCACATCGAAGGGGGATTCAGGACCTTATTAACTGATC 836
Query 830 GAAATAAGCTGATTATGACTGTTGGAGGAGCTACTGCATTAGCTGCAGGGATTTATACAA 889
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 837 GAAATAAGCTGATTATGACTGTTGGAGGAGCTACTGCATTAGCTGCAGGGGTTTATACAA 896
Query 890 CTCG 893
||||
Sbjct 897 CTCG 900
> AT2G18330.1 | Symbols: | AAA-type ATPase family protein | chr2:7965635-7969105
FORWARD LENGTH=2295
Length=2295
Score = 824 bits (446), Expect = 0.0
Identities = 759/907 (84%), Gaps = 34/907 (4%)
Strand=Plus/Plus
Query 7 ATGGCTGCTTCTAGATTGTGTTCCGCGGCGGCGATAGCTGCTGCGTTCACTTCAATGTCG 66
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 195 ATGGCTGCTTCTAGATTATGTTCCGCGGCGGCGATAGCTGCTGCGTTCACTTCAATGTCG 254
Query 67 ATGTCACAGAACCGTGCGTACGCCGATTCTCGATTCCGGTTTCCTTTCTAT-TCTTCTTC 125
|||||||||||||| || ||||| || || ||||| || |||||||||| | ||||||||
Sbjct 255 ATGTCACAGAACCGCGCTTACGCTGACTCGCGATTTCGCTTTCCTTTCT-TCTCTTCTTC 313
Query 126 TCCTCCTCC-GTCAGATTCTCCGGC-GAATCA-A--TCTTCTTCGAACTCTAG-TA--AG 177
||||| | | ||| ||||| | || ||| | ||||||||||| |||| | ||
Sbjct 314 ACCTCCGGCAGA-AGAATCTCCAACCGA-TCATAAGTCTTCTTCGAATTCTAAATCGGAG 371
Query 178 TCTAAACCAGAGGCTGATGAGCCTAAAGGATCGGGTTTTGATCCTGAGTCCCTTG-AGAG 236
||||||| || | ||||||||||||||||| ||||| ||||||||||| ||| | ||
Sbjct 372 ACTAAACCTGACTCCGATGAGCCTAAAGGATCTGGTTTCGATCCTGAGTCA-TTGGAAAG 430
Query 237 AGCTGCAAAAGCTCTTAGAGATATCAATAGCTCTCCCCATTCCAAACAGGTGTTTGATCT 296
|| ||| ||||||||| | || |||||||||||||| |||||||||||||||||||||||
Sbjct 431 AGGTGCTAAAGCTCTTCGTGAAATCAATAGCTCTCCTCATTCCAAACAGGTGTTTGATCT 490
Query 297 CATGAGGAAGCAGGAGAAAACTCGGTTAGCTGAATTAGCGGCAGAGTCTTCTCAATAC-G 355
||| | ||||||||||| ||||| ||||||||||||||||| ||| || || |
Sbjct 491 AATGCGAAAGCAGGAGAAGACTCGATTAGCTGAATTAGCGGCTGAGAAAGAACA-TAATG 549
Query 356 AAGCTATTCAAGC-A-CACAGAGATATTGAGAGACAACAGAAATTGGCTGAGGACCAGAG 413
||||||||||||| | || || || ||||| ||||| | ||||||||| ||||| |||||
Sbjct 550 AAGCTATTCAAGCTAGCA-AG-GACATTGAAAGACAGCGGAAATTGGCAGAGGATCAGAG 607
Query 414 AAATCTTT-TGCAGACA-CAGGCGCAAACCAAAGCGCAAATTCTGCGATATGAGGATGAA 471
|||| || ||||| || ||||| ||| | |||||||||| ||| |||||||||||||
Sbjct 608 AAAT-TTAGTGCAG-CAACAGGCCCAAGCGAAAGCGCAAAATCTTAGATATGAGGATGAG 665
Query 472 TTAGCCAGAAAGAGACA-GCAGACAGATCATGAAGCTCAGAGACATCATAATG-TGGAAT 529
|| ||||| |||||| | |||||||||| ||||||||||||||| ||||||| || |||
Sbjct 666 TTGGCCAGGAAGAGA-ATGCAGACAGATAATGAAGCTCAGAGACGGCATAATGCTG-AAT 723
Query 530 TGGTTAAGATGCAAGAGGCGTCTTCTAT-CAGGAAAGAGAGGGCAAAAATCGCCACAGAA 588
||||| ||||||||| || |||||||| | ||||||||| |||| ||| ||||| |||
Sbjct 724 TGGTTTCGATGCAAGAAGCATCTTCTATAC-GGAAAGAGAAAGCAAGAATTGCCACGGAA 782
Query 589 GAACAGATCCAAGCTCAGCATCGCCAAACTGAGAAAGAGAGAGCTGAACTTGAGCGAGAG 648
|||||||| ||||| ||||| ||| | ||||||||||||||||| ||||||||||||||
Sbjct 783 GAACAGATTCAAGCACAGCAGCGCGAGACTGAGAAAGAGAGAGCGGAACTTGAGCGAGAA 842
Query 649 ACGATTCGTGTCAAGGCCATGGCTGAAGCTGAAGGTCGGGCTCATGAAGCCAAACTTACT 708
|| ||||| || || || |||||||| |||||||| || ||||||||||| ||||| |||
Sbjct 843 ACAATTCGCGTGAAAGCTATGGCTGAGGCTGAAGGCCGAGCTCATGAAGCTAAACTCACT 902
Query 709 GAAGAGCAAAACAGAAGATTGCTTCTGGA-AAGGATTAATGGTGAAAGGGAGAAGTGGCT 767
|| ||||| || |||||| ||||||| || ||| || ||||||||||||||||| |||||
Sbjct 903 GAGGAGCAGAATAGAAGAATGCTTCTAGATAAG-ATAAATGGTGAAAGGGAGAAATGGCT 961
Query 768 TGCTGCAATCAACACCA-TGTTCAGTCACATCGAAGGGGGATTCAGGACCTTATTAACCG 826
||| ||||||||||| | | ||||||||||| ||||| ||| | |||||||||||||| |
Sbjct 962 TGCAGCAATCAACACGACT-TTCAGTCACATTGAAGGAGGAGTAAGGACCTTATTAACTG 1020
Query 827 ATCGAAATAAGCTGATTATGACTGTTGGAGGAGCTACTGCATTAGCTGCAGGGATTTATA 886
|||||| ||| ||||||||||||||||||||| ||| |||||||| || ||| |||| |
Sbjct 1021 ATCGAAGTAAATTGATTATGACTGTTGGAGGAGTTACGGCATTAGCCGCTGGGGTTTACA 1080
Query 887 CAACTCG 893
|||||||
Sbjct 1081 CAACTCG 1087
Score = 817 bits (442), Expect = 0.0
Identities = 817/993 (82%), Gaps = 46/993 (5%)
Strand=Plus/Plus
Query 882 TTATA-CAACTCGGATGCTTGGACAACCATCACTTATTC-GAGAATCTTCCATGGGTAGA 939
||||| ||| | | || ||||| || |||||||| | || |||||||||||||||| ||
Sbjct 1112 TTATATCAA-TAGAATTCTTGGGCAGCCATCACTGA-TCAGAGAATCTTCCATGGGCCGA 1169
Query 940 TTTCCATGGGCAGGCTCAATGTCTCAATTGAAGAACAGAA--T--CTCAGGTGCA---GC 992
|| ||||||||||||||| ||||||| || ||||||| || | | ||| |||| ||
Sbjct 1170 TTCCCATGGGCAGGCTCAGTGTCTCAGTTTAAGAACA-AACTTAGCACAGCTGCAGGGGC 1228
Query 993 AGCAGCATCTGCAGCAGAAGGGA-AAAAGCCACTTGATAATGTAATTCTCCATAC-TTCT 1050
|||||||||| |||||| ||| ||||||| ||||| ||||||||||||||| | ||||
Sbjct 1229 AGCAGCATCT---GCAGAA-GGAGAAAAGCCTCTTGAAAATGTAATTCTCCAT-CGTTCT 1283
Query 1051 TTGAAGA-AACGAATCGAGCATCTCGCTAGAGCTACAGCAAATACCAAATCCCATCAAGC 1109
||||||| | |||| |||| ||| || ||||| |||||||||||||| || ||| ||||
Sbjct 1284 TTGAAGACGA-GAATTGAGCGTCTTGCAAGAGCCACAGCAAATACCAAGTCACATAAAGC 1342
Query 1110 ACCATTCCGCAACATGATGTTTTATGGACCTCCTGGTACCGGTAAAACTATGGTCGCAAG 1169
||||||||| ||||||||||||||||| ||||| |||||||| ||||||||||| || ||
Sbjct 1343 ACCATTCCGAAACATGATGTTTTATGGGCCTCCAGGTACCGGAAAAACTATGGTGGCGAG 1402
Query 1170 GGAAATAGCTCGAAAATCGGGTCTGGATTATGCTATGATGACAGGTGGAGATGTTGCTCC 1229
||| || ||||| || |||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 1403 GGAGATTGCTCGGAAGTCGGGTCTTGATTATGCTATGATGACAGGAGGAGATGTTGCTCC 1462
Query 1230 -CTTGGGAT-CACAAGCTGTTACTAAA-ATCCATCAGATATTTGATTGGGCCAAGAAATC 1286
||| || | |||| |||||||| ||| |||||| | |||||||||||||| ||||||||
Sbjct 1463 TCTT-GG-TGCACAGGCTGTTAC-AAAGATCCATGAAATATTTGATTGGGCTAAGAAATC 1519
Query 1287 GAACAAAGGCTTACTTCTTTTCATTGATGAAGCCGATGCTTTTCTATGCAG-GCGTAACA 1345
|||||||| ||||| |||||||| |||||||| |||||||| |||||| | |||||||
Sbjct 1520 AAACAAAGGGTTACTGCTTTTCATCGATGAAGCTGATGCTTTCCTATGC-GAACGTAACA 1578
Query 1346 GCACTTACATGAGTGAGGCTCAACGTAGTGCTCTGAATGCTTTGCTCTTCCGAACCGGTG 1405
|||||||||||||||||||||| || || |||||||| || |||||||| ||||||||||
Sbjct 1579 GCACTTACATGAGTGAGGCTCAGCGCAGCGCTCTGAACGCGTTGCTCTTTCGAACCGGTG 1638
Query 1406 ATCAATCTCGGGACATTGTTCTTGTCTTAGCTACAAACAGACCTGGAGATCTCGATAGTG 1465
||||||| |||||||| || |||||| | |||||||||||||||||||||||||| ||||
Sbjct 1639 ATCAATCGCGGGACATAGTCCTTGTCCTGGCTACAAACAGACCTGGAGATCTCGACAGTG 1698
Query 1466 CGGTTACAGACAGGATTGATGAAGTCATTGAGTTCCCACTTCCAGGGGAAGAAGAACGTT 1525
| || || |||||||| || ||||| || ||||| || || || || ||||||||||| |
Sbjct 1699 CAGTCACTGACAGGATCGACGAAGTTATCGAGTTTCCTCTCCCTGGTGAAGAAGAACGCT 1758
Query 1526 TCAAGCTTCTCAATCTCTATCTCAATAAATATCTAAAGAGGGGT-GACAACAAC----A- 1579
||||||| ||||| ||||||||||| || || |||| | || | ||||| || |
Sbjct 1759 TCAAGCTCCTCAAGCTCTATCTCAACAAGTACCTAATG-GGTGACGACAAGAAAGGTGAG 1817
Query 1580 AA-GACACAAAACCG-AAATGGAGTCAT-TTGTTTAAGAAGCTG---TCACAGAAGATTA 1633
|| ||| |||| || |||||||| || ||||| |||||| | ||||||||||| |
Sbjct 1818 AAAGACTCAAA-CCTTAAATGGAG-CAACTTGTTCAAGAAGAAGAAGTCACAGAAGATAA 1875
Query 1634 CCGTTGAAGCAGACCTAACTGATAAAGTGATTTCTGAGGCTGCGAAGAAGACGGAAGGAT 1693
|| |||||| ||||||||| || |||||||| || ||||| || ||||| ||||| |
Sbjct 1876 CCATTGAAGGAGACCTAACCGACCAAGTGATTAAAGAAGCTGCAAAAAAGACAGAAGGCT 1935
Query 1694 TCTCTGGCCGTGAAATTGCAAAGCTTGTGGCCGGAGTACAAGCTG-GAGTGTACGGACGA 1752
| ||||| |||||||| || |||||||| ||||| || ||||||| | || || ||||||
Sbjct 1936 TTTCTGGTCGTGAAATCGCTAAGCTTGTCGCCGGTGTTCAAGCTGCG-GTATATGGACGA 1994
Query 1753 GAGGATTGTGTATTGGATTCACAGCTTTTCAAAGAGATTGTTGAATATAAGGTTGAAGAA 1812
|||||||||| |||||||| || ||||| |||| ||||| || |||||| | ||||||
Sbjct 1995 CAGGATTGTGTCTTGGATTCCCAACTTTTTGAAGAAATTGTGGATTATAAGATCGAAGAA 2054
Query 1813 CATCACCAAAGGCTTAGGCTTGCTTCTGAAGGT 1845
|||||||| || | || ||||| ||||||||
Sbjct 2055 CATCACCAGAGAATCAGACTTGCGACTGAAGGT 2087
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 92519604435
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5