BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491004
Length=1950
Score E
Sequences producing significant alignments: (Bits) Value
AT4G36280.1 | Symbols: | Histidine kinase-, DNA gyrase B-, and... 2931 0.0
AT4G36290.1 | Symbols: CRT1 | compromised recognition of TCV 1 ... 2102 0.0
AT4G36270.1 | Symbols: | ATP binding | chr4:17161024-17165241 ... 830 0.0
> AT4G36280.1 | Symbols: | Histidine kinase-, DNA gyrase B-, and
HSP90-like ATPase family protein | chr4:17165331-17169375
REVERSE LENGTH=2161
Length=2161
Score = 2931 bits (1587), Expect = 0.0
Identities = 1830/1945 (94%), Gaps = 25/1945 (1%)
Strand=Plus/Plus
Query 23 ATGCCTCGTATGGCGGAAAATGCAGCAGTCGCTGATGTTGTTCATCTCGACAGTGATAGT 82
||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 99 ATGCCTCCTATGGCGAAAAATGCAGCAGTCACTGATGTTGTTCATCTCGACAGTGATAGT 158
Query 83 GACAGTGACGAC-G-G-AGTAGGAGGAAGAGAATCAGCAAGTACAATCGCTGATGCTGCG 139
||||||||| || | | ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 159 GACAGTGACAACGGAGTAGTAGGAGGAAGAGAATCAGCAAGTACAATCGCTGGTGCTGCG 218
Query 140 ACGGTGGCTCCT------A-C--GGAATGCCGGAGCTTTTGGAAAGCCGGAGAAAACTTT 190
|| |||||||| | | |||||||||||||||||||| || ||||| |||||
Sbjct 219 ACAATGGCTCCTCGAGAGACCTTAGAATGCCGGAGCTTTTGGAAGGCGGGAGATTACTTT 278
Query 191 GTGATACCGATCGTTGTGACTCCGACTTCTCCAGGTTTGCTTGAGCATGCTCGAGTTCAT 250
|||||||||| |||||||||||| ||| |||||||| |||||||||||||||||||||||
Sbjct 279 GTGATACCGAACGTTGTGACTCCTACTGCTCCAGGTATGCTTGAGCATGCTCGAGTTCAT 338
Query 251 CCCAGGTTTCTTCACTCGAATGCTACTTCACACAAATGGGCTTTTGGAGCAATCGCTGAG 310
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 339 CCCAGGTTTCTTCACTCGAATGCTACCTCACACAAATGGGCTTTTGGAGCAATCGCTGAG 398
Query 311 CTACTTGACAATGCTGTTGACGAGATACAAAATGGTGCTACGTTTGTTAAGATTGATAAG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 399 CTACTTGACAATGCTGTTGACGAGATACAAAATGGTGCTACGTTTGTTAAGATTGATAAG 458
Query 371 ATCAATATTGTCAAAGATAATTCCCCAGCTTTACTTTTCCAAGATGATGGCGGTGGGATG 430
||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct 459 ATCAATATTGTCAAAGATAATTCCCCAGCTTTAGTTTTCCAAGATGATGGTGGTGGGATG 518
Query 431 GATCCCGCTGGGCTCAGAAAATGCATGAGCTTAGGCTACTCATCAAAGAAGTCTAATACA 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GATCCCGCTGGGCTCAGAAAATGCATGAGCTTAGGCTACTCATCAAAGAAGTCTAATACA 578
Query 491 ACAATTGGACAGTATGGAAATGGTTTCAAAACAAGTACCATGAGACTTGGAGCTGATGCC 550
|| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 579 ACGATTGGACAGTATGGAAATGGTTTCAAGACAAGTACCATGAGACTTGGAGCTGATGCT 638
Query 551 ATTGTTTTTAGTCGCTCAACTCGTGGAGGCACATCTACTCAGAGTGTTGGTC-TTCTGTC 609
|| |||||||||||||| |||||||||||||||||||||||||| ||||| | |||||||
Sbjct 639 ATCGTTTTTAGTCGCTCCACTCGTGGAGGCACATCTACTCAGAGCGTTGG-CATTCTGTC 697
Query 610 ATACACATTCCTCAGAAAAACTGGTCAGGATGATGTCATTGTTCCTATGATTGATTTTGA 669
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct 698 ATACACATTCCTTAGAAAAACTGGTCAGGATGATGTCACTGTTCCTATGATTGATATTGA 757
Query 670 TATATCCAAGGAGCGACCACAACCAATTATCTATGGATCTCAAGAAGATTGGGCTGCCAA 729
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 758 TATATCCAAGGAGCGACCACAACCAATTATCTATGGATCTCCAGAAGATTGGGCTGCCAA 817
Query 730 CCTTGAAATTCTACTCAAATGGTCTCCGTTTTCTACAGAAGACGAACTTTTACAACAGCA 789
||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||
Sbjct 818 CCTTGAAATTCTACTCAAATGGTCTCCGTTTTCTACAGAGGACGAACTTTTGCA---GCA 874
Query 790 GTTCGAGGACGTTGGAACTCATGGAACAAAAGTAATTATATACAACTTGTGGCTTAATGA 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 875 GTTCGAGGACGTTGGAACTCATGGAACAAAAGTAATTATATACAACTTGTGGCTTAATGA 934
Query 850 TGAAGGAATCTATGAGCTGAGTTTTGACGACGACGACGAGGACATCCGGCTCCGAGATGA 909
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 935 TGAAGGAATCTATGAGCTGAGTTTTGACGACGACGAGGAGGATATCCGGCTCCGAGATGA 994
Query 910 AAGTGTCAATGACGGTAAACGGTTGCACCATAAGTTATTGGAACTGAGATCTCATATTTC 969
||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 995 GAGTGTGAATGACGGAAAACGGTTGCACCATAAAATATTGGAACTGAGATCTCATATTTC 1054
Query 970 ATACCACTTACGTTACTCTCTGAGGGCTTATGCTTCAATGTTATATCTCAAAAAGTTCAA 1029
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1055 ATACCACTTACGTTATTCTCTGAGGGCTTATGCTTCAATGTTATATCTCAAAAAGTTCAA 1114
Query 1030 AAACTTCAAAATTATAATTCGGGGAATCCCTGTGGAGCAGTTCAACATTGCTGATGAATT 1089
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1115 AAACTTCAAAATTATAATTCGGGGAATCCCTGTGGAGCAGTTCAACATTGCTGATGGATT 1174
Query 1090 TAGATTTCTCGAGATTATAAAGTACAAGCCCCATACAGCTACAATGGAACAAGCTTCCAC 1149
||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct 1175 CAGATTTCCCGAGATTATTAAGTACAAGCCCCATACAGCTACAACGGAACAAGCTTCCAC 1234
Query 1150 TGAAATCAAAGTTGGATTTGTAAAGGAGGCGCCTAAGCTTGCAATTTGCGGTTTCAATGT 1209
|||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 1235 TGAAATCAAAATTGGATTTGTAAAGGAGGCACCTAAGCTTGCAATCTGCGGTTTCAATGT 1294
Query 1210 CTATCACAAAAACCGTCTCATCCGGCCTTTCTGGAAGGTCACTATGGGAGGGGACTCGAC 1269
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1295 GTATCACAAAAACCGTCTCATCCGGCCTTTCTGGAAGGTCACTATGGGAGGGGACTCGAC 1354
Query 1270 AGGCAATGGTGTTGTGGGAGTTCTTGAAGCAAACTTCATAGAACCAGCCCATGATAAGCA 1329
|||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1355 AGGCCACGGTGTTGTGGGAGTTCTTGAAGCAAACTTCATAGAACCAGCCCACGATAAGCA 1414
Query 1330 AGATTTTGAAAGGTCTTCTCTATTTCAGCGGCTGGAGGCGAGGTTGAAAAAGATTGTCTA 1389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1415 AGATTTTGAAAGGTCTTCTCTATTTCAGCGGCTGGAGGCGAGGTTGAAAAAGATTGTCTA 1474
Query 1390 TAGTTACTGGTATACCCACTGCCACGTTTTTGGATACCATACTTATCAAATGCCTGCAGA 1449
|||||||||||||| |||||||||| |||| |||||||||| |||||||||||||||||
Sbjct 1475 TAGTTACTGGTATAGCCACTGCCACCTTTTAGGATACCATAAATATCAAATGCCTGCAGA 1534
Query 1450 TAAGTCGAAAAAGATAGCAATACCTGATCAAC-TGCCTACTGTCAATACATTCAATCCTT 1508
|||||||||||||||||||||||||||||||| | |||||| ||| |||| |||||||||
Sbjct 1535 TAAGTCGAAAAAGATAGCAATACCTGATCAACCT-CCTACTATCAGTACAGTCAATCCTT 1593
Query 1509 CGCCTTTGCCTTCTGATAAAATAAGTCAAGGTGGTCCTATCATACATGAAATCAATCTTA 1568
|||||||||||||||||||||| ||||||||||| ||||| |||| ||||||||||||||
Sbjct 1594 CGCCTTTGCCTTCTGATAAAATTAGTCAAGGTGGCCCTATAATACGTGAAATCAATCTTA 1653
Query 1569 GTAACGCCACTTCAAGCCGTACAGTTGCTGTTGCAGCGCCACATATGAGAAATTCCA-TG 1627
|||||||||| |||||||||||||||||| |||| |||||||| |||||||||||| ||
Sbjct 1654 GTAACGCCACCTCAAGCCGTACAGTTGCTTTTGCTTCGCCACATTTGAGAAATTCCACTG 1713
Query 1628 GGTTTAAGAAGTAACTTCCAACCTGTGCAGCTCAACCCACAACCTGCGGCTGCTGATACT 1687
| ||||||||||||||| ||||| ||||||||||||||||||||| | ||||| ||||||
Sbjct 1714 G-TTTAAGAAGTAACTTTCAACCCGTGCAGCTCAACCCACAACCTACAGCTGCCGATACT 1772
Query 1688 GGAAACACCCTCGTTGGCAAGTCCGCGGGTGAGAT-CAGCGAAGAGAACTTGCGACTCTT 1746
||||||| ||||| ||||||||| ||||||||||| | || |||||||||| | ||||||
Sbjct 1773 GGAAACAACCTCGATGGCAAGTCAGCGGGTGAGATAC-GCCAAGAGAACTTACAACTCTT 1831
Query 1747 CATGAGGTGCGAGGAATATATAAAGAAAGAGAATGAAATAGAACAGACGGTAAAGAGCTT 1806
|||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct 1832 CATGAGGTGCGAGGAATATATAAAGAAAGAGAATGAAACAGAACAGACGGTGAAGAGCTT 1891
Query 1807 AGAAAAAGAACTGGAAGAAGTTAAAAGTAAATGTGCACAACTTGCTCTGCTTGTGGATGC 1866
||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||
Sbjct 1892 AGAAAAAGAACTGGAAGAATTTAAAAGTAAATGTGCACACCTTGCTCTGCTCGTGGATGC 1951
Query 1867 TAAGAAGAAGGAGATGCAACAAGTTTAGT-AAAAGCGTTACGAGTTAAAACTCTCTGGAA 1925
||||||||||||||||||||||| ||||| |||| ||||| ||||||| || ||| |||
Sbjct 1952 TAAGAAGAAGGAGATGCAACAAGCTTAGTTAAAA-CGTTAAGAGTTAATTCTATCTTGAA 2010
Query 1926 TCTAAAGAACCCTAGTTTGATTCAG 1950
|||||||||||||||||||||||||
Sbjct 2011 TCTAAAGAACCCTAGTTTGATTCAG 2035
> AT4G36290.1 | Symbols: CRT1 | compromised recognition of TCV
1 | chr4:17169464-17173215 REVERSE LENGTH=2141
Length=2141
Score = 2102 bits (1138), Expect = 0.0
Identities = 1637/1874 (87%), Gaps = 50/1874 (3%)
Strand=Plus/Plus
Query 107 AGAGAATCAGCAAG-TACAATCGCTGATGCTGCGACGGTGGCTCCTACG-G-------A- 156
|||||||||| ||| | | ||||||||||||||||||||||||||| || | |
Sbjct 139 AGAGAATCAGAAAGTTTCGATCGCTGATGCTGCGACGGTGGCTCCT-CGAGAAACCCTAG 197
Query 157 A-TGCCGGAGCTTT-TGGAAAGCCGGAGAAAACTTTGTGATACCGATC--GTTGTGACTC 212
| ||||| || ||| ||||||||||| |||||||||||||| || || | ||| ||||
Sbjct 198 AGTGCCGAAG-TTTCTGGAAAGCCGGCGAAAACTTTGTGAT-CCCTTCAAG-TGTTACTC 254
Query 213 CGACTTCTC-CAGGTTTGCTTGAGCATGCTCGAGTTCATCCCAGGTTTCTTCACTCGAAT 271
||| | | |||| || ||||||||||||| |||||||| | ||||||||||||||||
Sbjct 255 TAACTGC-CATAGGTATGGTTGAGCATGCTCGTGTTCATCCAAAGTTTCTTCACTCGAAT 313
Query 272 GCTACTTCACACAAATGGGCTTTTGGAGCAATCGCTGAGCTACTTGACAATGCTGTTGAC 331
||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 314 GCTACTTCACATAAATGGGCTTTTGGAGCAATCGCCGAGCTACTTGACAATGCGGTTGAT 373
Query 332 GAGATACAAAATGGTGCTA-CGTTTGTTAAGATTGATAAGATCAATATTGTCAAAGATAA 390
||||||||||| ||||||| || |||| ||||||||||||||||||||||| ||||||||
Sbjct 374 GAGATACAAAACGGTGCTACCG-TTGTCAAGATTGATAAGATCAATATTGTTAAAGATAA 432
Query 391 TTCCCCAGCTTTACTTTTCCAAGATGATGGCGGTGGGATGGATCCCGCTGGGCTCAGAAA 450
| | || || ||| ||||||||||| |||| |||||||||||||| |||| |||||||
Sbjct 433 TACACCTGCCTTAGTTTTCCAAGATAATGGTGGTGGGATGGATCCTAATGGGATCAGAAA 492
Query 451 ATGCATGAGCTTAGGCTACTCATCAAAGAAGTCTAATACAACAATTGGACAGTATGGAAA 510
||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||
Sbjct 493 ATGCATGAGCTTAGGCTACTCGTCAAAGAAGTCTAATACGACAATTGGACAATATGGAAA 552
Query 511 TGGTTTCAAAACAAGTACCATGAGACTTGGAGCTGATGCCATTGTTTTTAGTCGCTCAAC 570
||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 553 TGGTTTCAAGACAAGTACAATGAGACTTGGAGCTGATGCCATGGTTTTTAGTCGCTCAAC 612
Query 571 TCGTGGAGGCACATCTACTCAGAGTGTTGGTCTTCTGTCATACACATTCCTCAGAAAAAC 630
||||||||||| |||||| ||||| ||||||||||||| || |||||||| || |||||
Sbjct 613 TCGTGGAGGCAAATCTACACAGAGCATTGGTCTTCTGTCCTATACATTCCTTAGGAAAAC 672
Query 631 TGGTCAGGATGATGTCATTGTTCCTATGATTGATTTTGATATATCCAAG-GAGCGACCAC 689
||||||||||||||| || ||||||||||||||||| ||||||||| || || | || |
Sbjct 673 TGGTCAGGATGATGTGATCGTTCCTATGATTGATTTCGATATATCC-AGTGATAGCCCCC 731
Query 690 AACCAATTATCTATGGATCTCAAGAAGATTGGGCTGCCAACCTTGAA-ATTCTACTCAAA 748
|||||||||| ||||| |||| | ||||||| || |||||||| || ||||| ||||||
Sbjct 732 AACCAATTATTTATGGGTCTCCCGGAGATTGGTCTACCAACCTT-AACATTCTTCTCAAA 790
Query 749 TGGTCTCCGTTTTCTACAGA-AGACGAACTTTTACAACAGCAGTTCGAGGACGTTGGAAC 807
||||| |||||||| ||| | | ||||||||| |||||||||||||| |||||||
Sbjct 791 TGGTCCCCGTTTTCAACA-ATGGTCGAACTTTT---GCAGCAGTTCGAGGATATTGGAAC 846
Query 808 TCATGGAACAAAAGTAATTATATACAACTTGTGGCTTAATGATGAAGGAATCTATGAGCT 867
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 847 ACATGGAACAAAAGTAATTATATACAACTTGTGGCTTAATGATGAAGGAATCTATGAGCT 906
Query 868 GAGTTTTGACGACGACGACGAGGACATCCGGCTCCGAGATGAAAGTGTCAATGACGGTAA 927
||||||||||||||| || | ||| || |||||||||||||||| || | | ||||| ||
Sbjct 907 GAGTTTTGACGACGATGATGTGGATATACGGCTCCGAGATGAAAATGCCCAGGACGGGAA 966
Query 928 ACGGTTGCAC-CATAAGTTATTGGAACTGAGATCTCATATTTCATACCACTTA-CGTTAC 985
|||||||||| | ||| ||||||| | |||||||||||||| |||| | || || |
Sbjct 967 ACGGTTGCACGC-TAAAACATTGGAAGTAAGATCTCATATTTCGTACCGC-TATCGACAT 1024
Query 986 TCTCTGAGGGCTTATGCTTCAATGTTATATCTCAAAAAGTTCAAAAACTTCAAAATTATA 1045
||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1025 TCTCTAAGGGCTTACATTTCCATGTTATATCTCAAAAAGTTCAAAAACTTCAAAATTATT 1084
Query 1046 ATTCGGGGAATCCCTGTGGAGCAGTTCAACATTGCTGATGAATTTAGA-TTTCTCGAGAT 1104
|||||||| || |||||| ||| |||||||||||||||||||| ||| | || ||||
Sbjct 1085 CTTCGGGGAGTCTCTGTGGCGCAATTCAACATTGCTGATGAATTCAGACATCCT-GAGAC 1143
Query 1105 TATAAAGTACAAGCCCCATA-CAGCTACAATGGAACAAGCTTCCACTGAAATCAAAGTTG 1163
|||| |||||| ||||| | ||||| || |||| | ||| |||||| ||| |||||||
Sbjct 1144 AATAATGTACAAACCCCA-AGCAGCTGCAGTGGATTATGCTGCCACTGGAATTAAAGTTG 1202
Query 1164 GATTTGTAAAGGAGGCGCCTAAGCTTGCAATTTGCGGTTTCAATGTCTATCACAAAAACC 1223
|||| | |||||||| ||||| ||| ||||||| |||||||||||||||||||||||||
Sbjct 1203 GATTCATCAAGGAGGCCCCTAAACTTCCAATTTGTGGTTTCAATGTCTATCACAAAAACC 1262
Query 1224 GTCTCATCCGGCCTTTCTGGAAGGTCACTATGGGAGGGGAC-TCGACAGGCAATGGTGTT 1282
||||||||||||| |||||||||||| | | ||| ||| | ||| |||||||||||||
Sbjct 1263 GTCTCATCCGGCCATTCTGGAAGGTCGTTCT-GGAAGGGTCAACGAGAGGCAATGGTGTT 1321
Query 1283 GTGGGAGTTCTTGAAGCAAACTTCATAGAACCAGCCCATGATAAGCAAGATTTTGAAAGG 1342
||||||||||||| ||||||||||||||||||||||| || |||||||||||||| |||
Sbjct 1322 ATGGGAGTTCTTGAGGCAAACTTCATAGAACCAGCCCACGACAAGCAAGATTTTGAGAGG 1381
Query 1343 TCTTCTCTATTTCAGCGGCTGGAGGCGAGGTTGAAAAAGATTGTCTATAG-TTACTGGTA 1401
||||||||||||| |||||||||||||||| |||||| ||| || | | ||||||| |
Sbjct 1382 TCTTCTCTATTTCTGCGGCTGGAGGCGAGGCTGAAAAGGATAACCTCT-GATTACTGGCA 1440
Query 1402 TACCCACTGCCACGTTTTTGGATACCATACTTATCAAATGCCTGCAGATAAGTCGAAAAA 1461
| ||||| ||| |||| |||||||| ||| |||||| |||||||||||||||||||
Sbjct 1441 AAATCACTGTCACATTTTCGGATACCAAACTGCTCAAATCCCTGCAGATAAGTCGAAAAG 1500
Query 1462 GATAGCAATACCTGATCAACTGCCTACTGTCAATACATTCAATCCTTCGCCTTTGCCTTC 1521
|| || |||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 1501 GACAGTAATACCTGATCAACCGCCTACTGTCAATACATACAATCCTTCGCCTTTGCCTTC 1560
Query 1522 TGATAAAATAAGTCAAGGTGGTCCTATCATACATGAAATCAATCTTAGTAACGCCACTTC 1581
||||| ||| ||||| ||||||||||| |||| |||||||||||||||||||||||||||
Sbjct 1561 TGATAGAATCAGTCATGGTGGTCCTATAATACGTGAAATCAATCTTAGTAACGCCACTTC 1620
Query 1582 AAGCCGTACAGTTGCTGTTGCAGCGCCACATATGAGAAATTCCATGGGTTTAAGAAGTAA 1641
|||||| |||| ||||||||| ||||||||| ||||||||| || |||||||||| |||
Sbjct 1621 AAGCCGAACAGCTGCTGTTGCCGCGCCACATTTGAGAAATTACACAGGTTTAAGAAATAA 1680
Query 1642 CTTCCAACCTGTGCAGCTCAACCCAC-A--ACCTGCGGCT-GCTGATACTGGAAACACCC 1697
||||||||| |||||||||||||||| | |||||| ||| || ||||||||||||| ||
Sbjct 1681 CTTCCAACCCGTGCAGCTCAACCCACAACCACCTGCAGCTGGC-GATACTGGAAACAACC 1739
Query 1698 TCGTTGGCAAGTCCGCGGGTGAGATCA-GCGAAGAGAACTTGCGACTCTTCATGAGGTGC 1756
|||||||||||| |||| |||||| | ||||||||||||| | ||||||||||||||||
Sbjct 1740 TCGTTGGCAAGTTAGCGGCTGAGAT-ACGCGAAGAGAACTTACAACTCTTCATGAGGTGC 1798
Query 1757 GAGGAATATATAAAGAAAGAGAATGAAATAGAACAGACGGTAAAGAGCTTAGAAAAAGAA 1816
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1799 GAGGAATATGTAAAGAAAGAGAATGAAGTAGAACAGACGGTAAAGAGCTTAGAAAAAGAA 1858
Query 1817 CTGGAAGAAGTTAAAAGTAAATGTGCACAACTTGCTCTGCTTGTGGATGCTAAGAAGAAG 1876
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1859 CTGGAAGAAATTAAAAGTAAATGTGCACAACTTGCTCTGCTTGTGGATGCTAAGAAGAAG 1918
Query 1877 GAGATGCAACAAGTTTAGTAAAAGCGTTACGAGTTAAAACTCTCTGGAATCTAAAGAACC 1936
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 1919 GAGATGCAACAAGTTTAGTAAAAGCGTTACGAGTTAAAACTCTCTGGAACCTAAAAAACC 1978
Query 1937 CTAGTTTGATTCAG 1950
||||||||||||||
Sbjct 1979 CTAGTTTGATTCAG 1992
> AT4G36270.1 | Symbols: | ATP binding | chr4:17161024-17165241
REVERSE LENGTH=2163
Length=2163
Score = 830 bits (449), Expect = 0.0
Identities = 584/645 (91%), Gaps = 25/645 (4%)
Strand=Plus/Plus
Query 158 TGCCGGAGCTTTTGGAAAGCCGGAGAAAACTTTGTGATACCGATCGTTGTGAC---TCCG 214
||||||||||||||||| |||||||||||||| ||||| || | || ||| || |||
Sbjct 295 TGCCGGAGCTTTTGGAAGGCCGGAGAAAACTTCGTGATCCCTACCGGTGTTACTAATCC- 353
Query 215 A-CTTCTCCAGGTTTGCTTGAGCATGCTCGAGTTCATCCCAGGTTTCTTCACTCGAATGC 273
| || |||||||| || ||||||||||||| |||||||| | ||||||||||||||||||
Sbjct 354 AGCTGCTCCAGGTATGGTTGAGCATGCTCGTGTTCATCCAAAGTTTCTTCACTCGAATGC 413
Query 274 TACTTCACACAAATGGGCTTTTGGAGCAATCGCTGAGCTACTTGACAATGCTGTTGACGA 333
|||||||||||||| ||||||||||||||| || |||||| |||||||||||||||||||
Sbjct 414 TACTTCACACAAATAGGCTTTTGGAGCAATAGCCGAGCTAATTGACAATGCTGTTGACGA 473
Query 334 GATACAAAATGGTGCTACGTTTGTTAAGATTGATAAGATCAATATTGTCAAAGATAATTC 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 474 GATACAAAATGGTGCTACGTTTGTTAAGATTGATAAGATCAATATTGTCAAAGATAATTC 533
Query 394 CCCAGCTTTACTTTTCCAAGATGATGGCGGTGGGATGGATCCCGCTGGGCTCAGAAAATG 453
|||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 534 CCCAGCTTTAGTTTTCCAAGATGATGGCGGTGGAATGGATCCCGATGGGCTCAGAAAATG 593
Query 454 CATGAGCTTAGGCTACTCATCAAAGAAGTCTAATACAACAATTGGACAGTATGGAAATGG 513
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 594 CATGAGCTTAGGCTACTCATCAAAGAAGTCTAATACGACGATTGGACAGTATGGAAATGG 653
Query 514 TTTCAAAACAAGTACCATGAGACTTGGAGCTGATGCCATTGTTTTTAGTCGCTCAACTCG 573
|||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct 654 TTTCAAGACAAGTACCATGAGACTTGGAGCTGATGATATTGTTTTTACTCGCTCAACTCG 713
Query 574 TGGAGGCACATCTACTCAGAGTGTTGGTCTTCTGTCATACACATTCCTCAGAAAAACTGG 633
|||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 714 TGGAGGCAAATCTACTCAGAGCGTTGGCCTTCTGTCATACACATTCCTCAGAAAAACTGG 773
Query 634 TCAGGATGATGTCATTGTTCCTATGATT-GAT-T----T-----T-GATAT--AT-C--C 676
||||||||||||| ||||||||||||| ||| | | | ||||| || | |
Sbjct 774 TCAGGATGATGTCGTTGTTCCTATGATCCGATATGCAATGCAGATTGATATTGATACATC 833
Query 677 -AAGGAGCGACCACAACCAATTATCTATGGATCT-CAAGAAGATTGGGCTGCCAACCTTG 734
||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||
Sbjct 834 CAAGGAGCGACCACAACCAATTATCTATGGATCTGCA-GAAGATTGGGCTGCCAGCCTTG 892
Query 735 AAATTCTACTCAAATGGTCTCCGTTTTCTACAGAAGACGAACTTT 779
||||| ||||||| |||||||||||||||||||| | ||||||||
Sbjct 893 AAATTATACTCAAGTGGTCTCCGTTTTCTACAGAGGGCGAACTTT 937
Score = 747 bits (404), Expect = 0.0
Identities = 514/567 (91%), Gaps = 7/567 (1%)
Strand=Plus/Plus
Query 993 GGGCTTATGCTTCAATGTTATATCTCAAAAAGTTCAAAAACTTCAAAATTATAATTCGGG 1052
|||||||||||||||||||||||||||||| |||||| || |||||||||||| |||| |
Sbjct 1130 GGGCTTATGCTTCAATGTTATATCTCAAAAGGTTCAATAATTTCAAAATTATACTTCGTG 1189
Query 1053 GAATCCCTGTGGAGCAGTTCAACATTGCTGATGAATTTAGATT-TCTCGAGATTATAAAG 1111
||||||||||||||||||||||||||||||||||||| ||||| || |||| ||| |||
Sbjct 1190 GAATCCCTGTGGAGCAGTTCAACATTGCTGATGAATTAAGATTACCT-GAGACTATTAAG 1248
Query 1112 TACAAGCCCCATACAGCTACAATGGAACAAGCTTCCACTGAAATCAAAGTTGGATTTGTA 1171
||||| ||||||||| |||| |||| ||||| ||||||||||||||||||||||| ||
Sbjct 1249 TACAATCCCCATACA---ACAAAGGAAAAAGCTCCCACTGAAATCAAAGTTGGATTTATA 1305
Query 1172 AAGGAGGCGCCTAAGCTTGCAATTTGCGGTTTCAATGTCTATCACAAAAACCGTCTCATC 1231
||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct 1306 AAGGAGGCGCCTAAGCTTGCAGTTTGTGGTTTCAATGTCTATCACAAAAACCGTCTCATC 1365
Query 1232 CGGCCTTTCTGGAAGGTCACTATGGGAGGGGACTCGACAGGCAATGGTGTTGTGGGAGTT 1291
|||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||
Sbjct 1366 CGGCCTTTCTGGAAGGTCACTATGGGAGGGGAAAGGAGAGGCAGTGGTGTTGTGGGAGTT 1425
Query 1292 CTTGAAGCAAACTTCATAGAACCAGCCCATGATAAGCAAGATTTTGAAAGGTCTTCTCTA 1351
|||||||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct 1426 CTTGAAGCAAACTTTATAGAACCGGCCCACGATAAGCAAGATTTTGAGAGGTCTTCTCTA 1485
Query 1352 TTTCAGCGGCTGGAGGCGAGGTTGAAAAAGATTGTCTATAGTTACTGGTATACCCACTGC 1411
||||||||| ||||||| ||| ||||||||||||||| || ||||||| |||| ||||||
Sbjct 1486 TTTCAGCGGTTGGAGGCAAGGCTGAAAAAGATTGTCTCTAATTACTGGAATACACACTGC 1545
Query 1412 CACGTTTTTGGATACCATACTTATCAAATGCCTGCAGATAAGTCGAAAAAGATAGCAATA 1471
||||| || |||||| ||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 1546 CACGTATTCGGATACTGTACTTATGGAATGCCTGCAGATAAGTCGAAAAGGATAGCAATA 1605
Query 1472 CCTGATCAACTGCCTACTGTCAATACATTCAATCC-TTCGCCTTTGCCTTCTGATAAAAT 1530
|||||||||| |||||||||||||||||||||||| || |||||||||||||||| ||||
Sbjct 1606 CCTGATCAACCGCCTACTGTCAATACATTCAATCCCTT-GCCTTTGCCTTCTGATGAAAT 1664
Query 1531 AAGTCAAGGTGGTCCTATCATACATGA 1557
||||||||||||| || |||| |||
Sbjct 1665 TAGTCAAGGTGGTCAGATAATACGTGA 1691
Score = 211 bits (114), Expect = 2e-53
Identities = 134/144 (93%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 788 CAGTTCGAGGACGTTGGAACTCATGGAACAAAAGTAATTATATACAACTTGTGGCTTAAT 847
||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 988 CAGCTCGAGGATATTGGAACTCATGGAACAAAAGTAATTATATACAACTTGTGGCTTAAT 1047
Query 848 GATGAAGGAATCTATGAGCTGAGTTTTGACGACGACGACGAGGACATCCGGCTCCGAGAT 907
|||||||||||||| |||||||||||| |||||||| | ||||||||||| |||||||||
Sbjct 1048 GATGAAGGAATCTACGAGCTGAGTTTTCACGACGACAATGAGGACATCCGACTCCGAGAT 1107
Query 908 GAAAGTGTCAATGACGGTAAACGG 931
||||||||| ||||| ||||||||
Sbjct 1108 GAAAGTGTCCATGACAGTAAACGG 1131
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 96585848580
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5