BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491017 Length=1420 Score E Sequences producing significant alignments: (Bits) Value AT4G36160.1 | Symbols: ANAC076, VND2, NAC076 | NAC domain conta... 2165 0.0 AT2G18060.1 | Symbols: VND1, ANAC037 | vascular related NAC-dom... 712 0.0 AT4G36170.1 | Symbols: | unknown protein; Has 2 Blast hits to ... 185 8e-46 > AT4G36160.1 | Symbols: ANAC076, VND2, NAC076 | NAC domain containing protein 76 | chr4:17110747-17114141 REVERSE LENGTH=1465 Length=1465 Score = 2165 bits (1172), Expect = 0.0 Identities = 1351/1435 (94%), Gaps = 22/1435 (2%) Strand=Plus/Plus Query 1 TCTCTTCATATTCCCCGAAACTTATAACCAAGTTCAATATCAGTTCTCTCTGTCGTCGAT 60 |||||||| |||| |||||||||||||||||| ||||||||||||||||| || ||||| Sbjct 4 TCTCTTCACATTCACCGAAACTTATAACCAAGATCAATATCAGTTCTCTC--TC-TCGAT 60 Query 61 GATCATCATCTTCTACACATCCATCTCTCTTTGA---CTTCTTCTTC-T-TTACTAT--C 113 || |||||||||||||||| |||||| ||||||| |||||||||| | ||| ||| | Sbjct 61 GAACATCATCTTCTACACAGCCATCTTTCTTTGACTTCTTCTTCTTCTTCTTAATATAAC 120 Query 114 -CCTCGTTTCTTTTGTTTCCAAACGAGTAAATAGTATTCTATACACAAATATAT-CTTCT 171 ||||||||||||||||||||||||||||||||| | ||||||||| || ||| ||| Sbjct 121 GGCTCGTTTCTTTTGTTTCCAAACGAGTAAATAGTGTCCTATACACATATCTATAATTCC 180 Query 172 ACAGGTTGAAGAAAAGCAATTATGGAATCAGTGGATCAATCATGTAGTGTTCCTCCGGGA 231 |||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||| Sbjct 181 ACAGGTTGAAGAAAAGAAATAATGGAATCGGTGGATCAATCATGTAGTGTTCCTCCGGGA 240 Query 232 TTCAGATTCCATCCAACAGATGAAGAGCTCGTTGGTTACTATTTAAGGAAAAAAGTTGCA 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 TTCAGATTCCATCCAACAGATGAAGAGCTCGTTGGTTACTATTTAAGGAAAAAAGTTGCA 300 Query 292 TCCCAAAAGATCGATCTTGATGTCATAAGAGATATTGATCTCTACAGAATCGAACCATGG 351 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 TCGCAAAAGATCGATCTTGATGTCATAAGAGATATTGATCTCTACAGAATCGAACCATGG 360 Query 352 GATTTACAAGAGAGATGCCGAATCGGATACGAGGAAAGAAATGAATGGTATTTCTTCAGC 411 |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 361 GATTTACAAGAGAGCTGCCGAATCGGATATGAGGAAAGAAATGAATGGTATTTCTTCAGC 420 Query 412 CACAAAGATAAGAAATATCCAACAGGAACAAGAACAAACAGAGCGACCATGGCTGGGTTT 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 CACAAAGATAAGAAATATCCAACAGGAACAAGAACAAACAGAGCGACCATGGCTGGGTTT 480 Query 472 TGGAAAGCCACGGGTCGAGACAAGGCTGTTTACGACAAGTCAAAACTGATTGGTATGAGA 531 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 TGGAAAGCCACGGGCCGAGACAAGGCTGTTTACGACAAGTCAAAACTGATTGGTATGAGA 540 Query 532 AAAACACTTGTGTTCTACAAAGGAAGAGCCCCTAATGGCCAAAAAACCGATTGGATCATG 591 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 AAAACACTTGTGTTCTACAAAGGAAGAGCCCCTAATGGCCAAAAAACCGATTGGATCATG 600 Query 592 CATGAATACCGGCTAGAGTCAGATGAGAATGCACCTCCTCAGGAAGAAGGGTGGGTGGTT 651 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 CATGAATACCGGCTAGAGTCAGATGAGAATGCACCTCCTCAGGAAGAAGGGTGGGTGGTT 660 Query 652 TGTAGAGCGTTCAAGAAAAAGCCAATGACCGGGCAAGCCAAGAACACGGAAACTTGGAGC 711 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 661 TGTAGAGCGTTCAAGAAAAAGCCAATGACCGGGCAAGCCAAGAACACAGAAACTTGGAGC 720 Query 712 TCAAGTTACTTTTACGACGAATTACCGAGTGGAGTAAGCTCGGTTGCGGAGCCTCTCAGT 771 |||||||||||||||||||||||||||||||||||| |||| ||| |||||||||| | Sbjct 721 TCAAGTTACTTTTACGACGAATTACCGAGTGGAGTACGCTCAGTTACGGAGCCTCTTAAC 780 Query 772 TACGTATCTAAGCAGAAACAAAACATTTTTGCACAAGATTTAATGTTCAAGCAAGAACTA 831 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 781 TACGTATCTAAGCAGAAACAAAACGTTTTTGCACAAGATTTAATGTTCAAGCAAGAACTA 840 Query 832 GAAGGATCAGATATCGGTTTGAACTTTATCCACTGCGATCAATTCATTCAACTTCCGCAG 891 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 841 GAAGGATCAGATATCGGTTTAAACTTCATCCACTGCGATCAATTCATTCAACTTCCGCAG 900 Query 892 CTTGAAAGCCCTTCACTCCCTCTTACGAAGAGGCCAGTGAACTCGACGTCAATTACATCA 951 |||||||||||||||||||||||||| || || ||||||| || |||||||||||||||| Sbjct 901 CTTGAAAGCCCTTCACTCCCTCTTACCAAAAGACCAGTGAGCTTGACGTCAATTACATCA 960 Query 952 TTGGAGAAGAATCAAACTAACTACAAAAGACAGTTAATAGAAGATGATGTGAGCTTCAAT 1011 |||||||||||| ||| || |||||||||||| ||||||||||| ||||||||||||||| Sbjct 961 TTGGAGAAGAATAAAAATATCTACAAAAGACATTTAATAGAAGAGGATGTGAGCTTCAAT 1020 Query 1012 GCGTTGATAAGTAGTGAAAATAAAGGTAACAAGAAGAAGAAAACATCAGTGATGACGACG 1071 ||| | |||||||||| |||||||| ||| |||||||||||||||||||||||||||||| Sbjct 1021 GCGCTAATAAGTAGTGGAAATAAAGATAAGAAGAAGAAGAAAACATCAGTGATGACGACG 1080 Query 1072 GACTGGAGAGCACTCGATAAATTTGTTGCTTCTCAACTTATGAGCCAAGAAGATGGAGTT 1131 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1081 GATTGGAGAGCACTCGATAAATTTGTTGCTTCTCAACTTATGAGCCAAGAAGATGGAGTT 1140 Query 1132 TCAGGTTTCGGAGGTCATCAAGAAGAAGATAACAATAAAATCAGTCATTACAATAACGAA 1191 || ||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||| Sbjct 1141 TCGGGTTTTGGAGGTCATCATGAAGAAGATAACAATAAAATCGGTCATTACAATAACGAA 1200 Query 1192 GAGAGCAATAACAACGGA---GTAGAAACTGCTTCTTCCACGTTATTGAGTGATAGAGAA 1248 |||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 1201 GAGAGCAATAACAAGGGATCAGTAGAGACTGCTTCTTCCACGTTATTGAGTGATAGAGAA 1260 Query 1249 GAAGAGAACAGATTCATCAGTGGATTCTTGTGTTCCAACTTGGACTATGACTTATATAGT 1308 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1261 GAAGAGAACAGATTCATCAGTGGATTATTGTGTTCCAACTTGGACTATGACTTATATAGG 1320 Query 1309 GATTTGCATGTTTGATAAAAGATAACGCTATAGTATGGTGCGTAAAAATGTTCGCTATAT 1368 ||||| |||||||||||||||||||| ||||| |||||||||||| | || ||||||| Sbjct 1321 GATTTACATGTTTGATAAAAGATAACACTATAATATGGTGCGTAACG-T-TT-GCTATAT 1377 Query 1369 AGGTACGTAGAAT--ATTGATA-AGAGATAACATATATAAAAATGTGTGAAAGAT 1420 ||||||||||||| ||||||| || |||||||||||||| ||||||||||||| Sbjct 1378 AGGTACGTAGAATTTATTGATACAGT-ATAACATATATAAAGATGTGTGAAAGAT 1431 > AT2G18060.1 | Symbols: VND1, ANAC037 | vascular related NAC-domain protein 1 | chr2:7848399-7850303 REVERSE LENGTH=1098 Length=1098 Score = 712 bits (385), Expect = 0.0 Identities = 785/970 (81%), Gaps = 60/970 (6%) Strand=Plus/Plus Query 209 AATCATGTAGTGTTCCTCCGGGATTCAGATTCCATCCAACAGATGAAGAGCTCGTTGGTT 268 |||| ||||| |||||||| ||||| || |||||||| || || |||||||| || || | Sbjct 14 AATCTTGTAGCGTTCCTCCAGGATTTAGGTTCCATCCGACGGACGAAGAGCTTGTCGGGT 73 Query 269 ACTATTTAAGGAA-AAAAGTTGCATCCCAAAAGATCGATCTTGATGTCATAAGAGATATT 327 ||||| ||||||| |||| | ||||| |||||||| ||||| || ||||| ||||| || Sbjct 74 ACTATCTAAGGAAGAAAA-TCGCATCGCAAAAGATTGATCTCGACGTCATCAGAGACATC 132 Query 328 GATCTCTACAGAATCGAACCATGGGATTTACAAG-AGAGATGCCGAATCGGATACGAGGA 386 |||||||||||||| |||||||||||| |||||| | | ||| |||||||| || ||||| Sbjct 133 GATCTCTACAGAATAGAACCATGGGATCTACAAGAACA-ATGTCGAATCGGTTATGAGGA 191 Query 387 A-AGAAATGAATGGTATTTCTTCAGCCACAAAGATAAGAAATATCCAACAGGAACAAGAA 445 | | ||||||||||||||| || || ||||| || |||||||||||||| || ||||||| Sbjct 192 ACA-AAATGAATGGTATTTTTTTAGTCACAAGGACAAGAAATATCCAACGGGGACAAGAA 250 Query 446 CAAACAGAGCGACCATGGCTGGGTTTTGGAAAGCCACGGGTCGAGACAAGGCTGTTTACG 505 | || ||||||||||||||||| ||||||||||||||||| ||||||| |||||||||| Sbjct 251 CTAATAGAGCGACCATGGCTGGATTTTGGAAAGCCACGGGAAGAGACAAAGCTGTTTACG 310 Query 506 ACAAGTCAAAACTGATTGGTATGAGAAAAACACTTGTGTTCTACAAAGGAAGAGCCCCTA 565 |||| ||||||| ||||||||||| |||||||||||||||||||||||| | || |||| Sbjct 311 ACAAAACAAAACTAATTGGTATGAGGAAAACACTTGTGTTCTACAAAGGACGTGCACCTA 370 Query 566 ATGGCCAA-AAAACCGATTGGATCATGCATGAATACCGGCTAGAGTCAGATGAGAATGCA 624 |||| ||| ||| ||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct 371 ATGG-CAAGAAATCCGATTGGATCATGCATGAGTACCGGCTCGAGTCAGATGAGAATGCA 429 Query 625 CCTCCTCAGGAAGAAGGGTGGGTGGTTTGTAGAGCGTTCAAGAAAAAGCCA-ATGACCGG 683 || || ||||||||||| ||||||||||||||||| ||||| |||||| | | || || Sbjct 430 CCGCCCCAGGAAGAAGGATGGGTGGTTTGTAGAGCATTCAA-AAAAAG--AGCT-ACAGG 485 Query 684 GCAAGCCAAGAACACGGAAACTTGGAGCTCAAGTTACTTTTACGACGAA-TT--ACCGAG 740 ||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||| Sbjct 486 GCAAGCCAAGAACACGGAAACTTGGAGCTCAAGTTACTTTTACGATGAAGTTGCACCGAA 545 Query 741 TGGAGT-AAGCTCGGTTGCGGAGCCTC-TC-AGTTACGTATCTAAGCAGAAACAAAACAT 797 |||||| || ||||||| ||| || | | | |||| ||||||||||| |||| ||||| Sbjct 546 TGGAGTTAA-CTCGGTTATGGACCC-CATTGA-TTACATATCTAAGCAGCAACATAACAT 602 Query 798 TTTTGC-ACAAGATTTAATGT-TCAAGCAAGAACTAGAAGGA-TCAGAT-ATCGGTTTGA 853 ||||| | ||| ||| |||| | |||||||||||||||||| | | | || ||| | | Sbjct 603 TTTTGGGA-AAGGTTTGATGTGT-AAGCAAGAACTAGAAGGAATG-GTTGAT-GGTATAA 658 Query 854 ACTTTATCCACTGCGA-TCAATTCATTCAACTTCCGCAGCTTGAAAGCCCTTCACTCCCT 912 ||| ||| || | ||| |||||||||||| || || || || |||||||||| ||||| Sbjct 659 ACTATATACAAT-CGAATCAATTCATTCAGCTCCCACAACTCCAAAGCCCTTCTCTCCCG 717 Query 913 CTTACGAAGAGGCCAGTGAA-CTCGACGTCAATTACATCATTGGAGAAGAATCAAACTAA 971 || | ||| || || | || ||||| ||| || |||||| |||| || ||| | | || Sbjct 718 CTGATGAAAAGACCT-TCAAGCTCGATGTCCATAACATCAATGGATAACAATTA--C-AA 773 Query 972 CTACAAAAGAC-AGTTAATAGAAGATGATGTGAGCTTCAA-TGCGTTGATAAGTAGTGAA 1029 ||| ||| | | ||| | ||||| | |||||| | | | || ||||| || || Sbjct 774 CTATAAACTCCCA-TTAGC-G--GATGAAGAAAGCTTCGAGT-CATTCATAAG-AG-GAG 826 Query 1030 AATAAAGGTAACAAGAAGAAGAAAACATCA-GTGATGACGACGG-AC-T-GGAGAGCACT 1085 | | || || ||||||||||| | || || |||| ||||| | | |||||| | | Sbjct 827 AGGATAG--AAG--GAAGAAGAAAA-AGCAAGTAATGATGACGGGAAATTGGAGAG-AGT 880 Query 1086 C-GATAAATTTGTTGCTTCTCAACTTATGAGCCAAGAAGA---TGGAGTTTCAGGTTTCG 1141 || || ||||||||||| |||||||||||||||||||| |||| |||| |||||| Sbjct 881 TAGACAAGTTTGTTGCTTCACAACTTATGAGCCAAGAAGACAATGGAACTTCAAGTTTCG 940 Query 1142 GAGGTCATCA 1151 ||||||||| Sbjct 941 CAGGTCATCA 950 > AT4G36170.1 | Symbols: | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:17113872-17119834 FORWARD LENGTH=489 Length=489 Score = 185 bits (100), Expect = 8e-46 Identities = 150/172 (87%), Gaps = 11/172 (6%) Strand=Plus/Minus Query 1 TCTCTTCATATTCCCCGAAACTTATAACCAAGTTCAATATCAGTTCTCTCTGTCGTCGAT 60 |||||||| |||| |||||||||||||||||| ||||||||||||||||| || ||||| Sbjct 175 TCTCTTCACATTCACCGAAACTTATAACCAAGATCAATATCAGTTCTCTC--TC-TCGAT 119 Query 61 GATCATCATCTTCTACACATCCATCTCTCTTTGA---CTTCTTCTTC-T-TTACTAT--C 113 || |||||||||||||||| |||||| ||||||| |||||||||| | ||| ||| | Sbjct 118 GAACATCATCTTCTACACAGCCATCTTTCTTTGACTTCTTCTTCTTCTTCTTAATATAAC 59 Query 114 -CCTCGTTTCTTTTGTTTCCAAACGAGTAAATAGTATTCTATACACAAATAT 164 ||||||||||||||||||||||||||||||||| | ||||||||| |||| Sbjct 58 GGCTCGTTTCTTTTGTTTCCAAACGAGTAAATAGTGTCCTATACACATATAT 7 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 69979559730 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5