BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491019
Length=2928
Score E
Sequences producing significant alignments: (Bits) Value
AT4G36120.1 | Symbols: | Plant protein of unknown function (DU... 3068 0.0
AT2G24470.1 | Symbols: | Plant protein of unknown function (DU... 294 3e-78
> AT4G36120.1 | Symbols: | Plant protein of unknown function (DUF869)
| chr4:17093088-17096573 REVERSE LENGTH=3116
Length=3116
Score = 3068 bits (1661), Expect = 0.0
Identities = 1934/2064 (94%), Gaps = 26/2064 (1%)
Strand=Plus/Plus
Query 1 ATGGACGGTAGAGGTTGGCCATGGAAGAGAAAGTCTTCGGACAAAGCCACGACTGAGAAA 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGAGGGTAGAGGTTGGCCATGGAAGAGAAAGTCTTCGGACAAAGCCACGACTGAGAAA 60
Query 61 ACAGTTGTTGGAAACGAGTCAACTCCTGTTTGTTCTTTGTCTTACTTAGCTTCTCTGGAG 120
|||||||||||| ||||||||||||||||||||||||||| ||||| |||||||| |||
Sbjct 61 CCAGTTGTTGGAATCGAGTCAACTCCTGTTTGTTCTTTGTCCTACTTGGCTTCTCTTGAG 120
Query 121 AATCAGGAGAAGTGTAAAAACACAAACTATGTTCAGATTACTATGGATTCATACACACAT 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 121 AATCAGGAGAAGTGTAAAAACACAAACTATGTTCAGATAACTATGGATTCATACACACAT 180
Query 181 ATGAGTAGAATGGAGGATCAGGTCAAATTGTTTGAAAG-TGAAGTTAAAGATCTTAAAGA 239
|||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||
Sbjct 181 ATGAGTAGAATGGAGGATCAGGTCAAATTGTTTG-AAGTTCAAGTTAAAGATCTTAAAGA 239
Query 240 AAAACTCACTCTTGCTTACTCTCAGATCAAGACTAAAGAATCTTTGATTCTTCAACATGC 299
|||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||
Sbjct 240 AAAACTCACTCTTGCTCACTCTGAGATCAACACTAAAGAATCTTTGATTCTTCAACATGC 299
Query 300 CAAAGTTGCTGAAGAAGCTGTTTCAGGATGGGAGAAGGCTGATGCAGAAACTTTGGTTCT 359
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 300 CAAAGTCGCTGAAGAAGCTGTTTCAGGATGGGAGAAGGCTGATGCAGAAACTTTGGCACT 359
Query 360 AAAACGCCAACTTGAATCTGTTACACTCTTAAAGCTCACTGCAGAGGATCGAGCATCGCA 419
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 TAAACGTCAACTCGAATCTGTTACACTCTTAAAGCTCACTGCAGAGGATCGAGCATCGCA 419
Query 420 TTTGGATGATGCGTTGAAAGAGTGCACAAGGCAGATTAGGATTGTGAAAGATGAAAGTGA 479
|||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||||
Sbjct 420 TTTGGATGATGCGTTGAAAGAGTGTACAAGGCAGATAAGGATTGTGAAAGAAGAGAGTGA 479
Query 480 CCAGAAGCTGCAAGATGTGATTCTTGCCAAAACCACTCATTGGGACAAGATCAAAGCCGA 539
|||||||||| |||||||||||||| || |||| ||| ||||| ||||||||||||||
Sbjct 480 TAAGAAGCTGCAGGATGTGATTCTTGCTAAGACCAGTCAATGGGATAAGATCAAAGCCGA 539
Query 540 GCTTGAAGGTAAGATCGATGAGTTGAGCCAGGGACTTCACCGGGCAGCTTCTGACAATGC 599
||||||||| ||||||||||| ||||| | ||||| |||||||||||||||||||||||
Sbjct 540 GCTTGAAGGAAAGATCGATGAATTGAGTGAAGGACTACACCGGGCAGCTTCTGACAATGC 599
Query 600 AGCACTCACTAGATCGTTACAAGAACGATCGGAGATGATTA-TAAGGATTAGTGAGGAAA 658
|||||||||||||||||| ||||||||||| ||||||| || |||||||||||||||| |
Sbjct 600 AGCACTCACTAGATCGTTGCAAGAACGATCTGAGATGA-TAGTAAGGATTAGTGAGGAGA 658
Query 659 GGTCTAAAGCTGAAGCTGATGTGGAAAAGCTGAAGACTAATCTTCAGTTGGCTGAGAAGG 718
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 659 GGTCTAAAGCTGAAGCTGATGTGGAAAAGTTGAAGACTAATCTTCAGTTGGCTGAGAAGG 718
Query 719 AGATTAG-TACGCTGAAGTATGATGTTCATGTTGCTTCAAAAGAAGTTGAGATCCGCAAC 777
||||||| || |||||||| ||| |||| |||||||| ||||||||||||||||||||
Sbjct 719 AGATTAGTTA-TCTGAAGTACGATCTTCACGTTGCTTCCAAAGAAGTTGAGATCCGCAAT 777
Query 778 GAAGAGAAAAACATGAGTTTGAAGTCAGCGGAAATCGCAAACAAACAGCATCTGGAAGGT 837
|||||||||||||||||||||||||| ||||| |||||||| || |||||||||||||||
Sbjct 778 GAAGAGAAAAACATGAGTTTGAAGTCGGCGGATATCGCAAATAAGCAGCATCTGGAAGGT 837
Query 838 GTGAAAAAGATTGCAAAACTTGAAGCAGAGTGTCAAAGG-TTAAGAGGGCTTCTACGGAA 896
||||||||||||||||||||||||||||||||||| ||| || ||||| ||||| |||||
Sbjct 838 GTGAAAAAGATTGCAAAACTTGAAGCAGAGTGTCATAGGCTT-AGAGGACTTCTGCGGAA 896
Query 897 GAAGCTTCCTGGTCCTGCTGCTATGGCTCAAATGAAAATAGAAGTTGAAAGCTTAGGGCA 956
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 897 AAAGCTTCCTGGTCCTGCTGCTATGGCTCAAATGAAGCTAGAAGTTGAAGGCTTAGGGCA 956
Query 957 TGAATTCACAGACCCTCGAGCACAGAGAAACATGTCTCAAAATCACAATGCACACATCGC 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 957 TGAATTCACAGACCCTCGAGCACAGAGAAACATGTCTCAAAATCACAATGCACACATCGC 1016
Query 1017 AAAGGCAGAGATTTCTGCTGATCATAAGTTGGAAGAGTGCGAAAGAGAGAATGTATATCT 1076
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1017 AAAGGCAGAGATTTCTACTGATCATAAGTTGGAAGAGTGCAAAAGAGAGAATGTATATCT 1076
Query 1077 CACAAGACGTACATTGGAAATGGAGGAGGAGATTCAGACACTTAAAGAACATCTCGCTGC 1136
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct 1077 CACAAGACGTACATTGGAAATGGAGGAGGAGATTCAGACGCTTAAAGAACATCTCTCTGC 1136
Query 1137 CCGTAACAATGAACTGCAGGTTTCGAGAAATGTATGCGCAAAAACTCTTGGGAAGCTTAA 1196
|||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 1137 TCGTAACAATGAACTGCAGGTTTCGAGAAATGTATGCGCTAAGACTCTTGGGAAGCTTAA 1196
Query 1197 GATTCTTGAAGGGCAGATGCATACGTTTAACAATGACAAGAGTGCTCCAAAATCAAATAG 1256
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 1197 GATTCTTGAAGGGCAGATGCATATGTTTAACAATGACAAGAATGCTCCAAAATCAAATAG 1256
Query 1257 CAGAAATCTTTCTGAAAGTCCATCCAGTGGTCATGATCATAACTATCCGCCTAGTGTCAT 1316
||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct 1257 CAGAAATCTCTCTGAAAGTCTATCCAGTGGTCATGATCATCACTATCCGCCTAGTGTCAC 1316
Query 1317 CTCGGTATCCGAAGATGGATTTGATGAAGAAGGAAGTTCTTCTGAGTGTGGCCCAGCAAT 1376
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1317 CTCGGTGTCCGAAGATGGATTTGATGAAGAAGGAAGTTCTTCTGAGTGTGGCCCAGCAAC 1376
Query 1377 CTCAGC-AGATTCTCATAAAGTGAGAAAAGTAAGTGTTGATGGTTCCTCAAAGCCTAAGA 1435
|||| | ||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct 1377 CTCA-CTAGATTCTCATAAAGTGAGAAAAGTAAGTGTTAATGGTTCCTCAAAGCCTAGGA 1435
Query 1436 TTTCTAGTAGACTGGAGTTAATGGATGACTTCCTGGAGATTGAAAAGTTAGCAGCTAATG 1495
|||||||||||||||||| |||||||||||| |||||||||||||||||| || || ||
Sbjct 1436 GTTCTAGTAGACTGGAGTTGATGGATGACTTCTTGGAGATTGAAAAGTTAGTAGGTAGTG 1495
Query 1496 ATCCAGATGGAGCTAACTCAGCTTCAAAATCTTCCAACAGTGTCTGCAGTAGTAA-ATCT 1554
||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||
Sbjct 1496 ATCCAGATGGAGCTAACTCAGCTTCAAAATCTTCCAACAGTGTTTGCAGTAG-AAGATCT 1554
Query 1555 GTGGAAAAACAATCCACTAGTAAGTCCAGTGAGCAAGATGAGGATACAACAACACTTGAT 1614
||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1555 GTGGAAAAACAGTCCTCTAGTAAGTCCAGTGAGCCAGATGAGGATACAACAACACTTGAT 1614
Query 1615 CAGCTGTTAACAGTTCTCCGCTCAAGAATCAACAGGATATTTGAATCTCAAGAGGGCATT 1674
|||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1615 CAGCTGCTAATGGTTCTCCGCTCAAGAATCAACAGGATATTTGAATCTCAAGAGGGCATT 1674
Query 1675 AGCGTTGAGAAAATCGTTGAAGCCACAAGATTTTCGATCCAAGAGATGCAAGGATCATCA 1734
||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1675 AGCATTGACAAAATCGTTGAAGCCGCAAGATTTTCGATCCAAGAGATGCAAGGATCATCA 1734
Query 1735 CCCACACAAAAGTCAAGTCATCTGTTTGAAGTTACTGATGAAACTCTAGAGAAACATGTT 1794
||| || || |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1735 ACCAAACGAATGTCAAGTCATCTTTTTGAAGTTACTGATGAAACTCTAGAGAAACATGTG 1794
Query 1795 TTGTCATCTCAGGATACCCAAAACAGCGAAAAGGAGCAGAAGAACACCAAGCAACAAGAT 1854
| || | | || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1795 --G--AT---A---T-CC-AAAACAGCGAAAAGGAGCAGAAGAACACCAAGCAACAAGAT 1842
Query 1855 TTGGAAGCAGCTGTTACCAATATTCACCACTTCATAAAATCAACTACAAAGGAAGCAACA 1914
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1843 TTGGAAGCAGCTGTTGCCAATATTCACCACTTCATAAAATCAACTACAAAAGAAGCAACA 1902
Query 1915 CAACTTCAGGACATGAATGGGAATGGACAACTCAGGGATAGCTTGGAGGATTTCTCTTTA 1974
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |
Sbjct 1903 CAACTTCAGGACATGAATGGGAATGGACAACTGAGGGAGAGCTTGGAGGATTTCTCTTCA 1962
Query 1975 TCGGT-AGGTAAATATCCAACCGGTGAATCAAGCCTTTCTGACCTTGTTCTAGAACTCTC 2033
||||| || |||||||||||||||||||||||||||||||||| || | |||||||||||
Sbjct 1963 TCGGTTAG-TAAATATCCAACCGGTGAATCAAGCCTTTCTGACGTTATGCTAGAACTCTC 2021
Query 2034 CCGCATTTCAGTTCTAGCTAGTAA 2057
||||||||| ||||||||||||||
Sbjct 2022 CCGCATTTCGGTTCTAGCTAGTAA 2045
Score = 669 bits (362), Expect = 0.0
Identities = 479/530 (90%), Gaps = 29/530 (5%)
Strand=Plus/Plus
Query 2052 TAGTAAAGAGA-CATCTGTTGCAGAGAGCAACGATAAAGTTACA-TTGCTACAAAAAGAG 2109
||||||||||| | ||||| |||||||||||||||| || ||| || || |
Sbjct 2079 TAGTAAAGAGATC-CCTGTTACAGAGAGCAACGATAAGGTCACACTT-CT-C-------- 2127
Query 2110 ATTGGAGAGTCAGATTGTGATCCACTGAGAGACACATTTGCTAAGACAGAAGATCACTGT 2169
||| ||||||||||| | |||||||| ||||||||||||||||||| ||||||||||
Sbjct 2128 TTTGAAGAGTCAGATTCTAATCCACTGGGAGACACATTTGCTAAGAC---AGATCACTGT 2184
Query 2170 GTAGATAACTTGATCAATGGTCATGCGGTGAATGATTCATCATGCAAGAGCTTGTTGAAA 2229
||||||||||||||| | || |||| |||||||||||||||||||||||||||||
Sbjct 2185 GTAGATAACTTGATC-A-----AT--GGTG-ATGATTCATCATGCAAGAGCTTGTTGAAA 2235
Query 2230 GAGGTGGAACAGCTAAAATTGGAGAAAGAGAACATTGCAGTAGAATTATCAAGATGTTTG 2289
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2236 GAGGTGGAACAGCTAAAGTTGGAGAAAGAGAACATTGCAGTAGAATTATCAAGATGTTTG 2295
Query 2290 CAGAATCTTGAAAGTACAAAGGCAGGGTTGGAAGAAAAAGAGCAGCTCATATCGAAGCTG 2349
|||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct 2296 CAGAATCTTGAAAGTACAAAGGCATGGTTGGAAGAAAAAGAGCAGCTGATATCGAAGCTG 2355
Query 2350 AAATCGCAGCTCACTTCTTCAGAAGATCTCCAAAGCTTGGCAGAAACTCAGCTTAAATGC 2409
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2356 AAATCGCAGCTCACTTCTTCAGAAGATCTCCAAAGCTTGGCGGAAACTCAGCTTAAATGC 2415
Query 2410 GTTACTGAGTCATACAAAACGCTTGAACTTCATGCCAAAGATCTTAAAGCTAAAGTGAAA 2469
|||||||||||||||||| ||||||| |||||||||||||| ||| ||||||||||||||
Sbjct 2416 GTTACTGAGTCATACAAATCGCTTGATCTTCATGCCAAAGAACTTGAAGCTAAAGTGAAA 2475
Query 2470 AGCTTAGGA-GAAGAGACAGAGAGACTAGAAATGGCTTTCGC-ATCAGAAAAGCATGGCC 2527
||||| ||| ||||||||| ||||||| |||||||||||| | | |||||||||||||||
Sbjct 2476 AGCTT-GGAAGAAGAGACAAAGAGACTTGAAATGGCTTTCACCA-CAGAAAAGCATGGCC 2533
Query 2528 ATGAGGAGACTTTAGCTAAATGCAGAGACCTTCAAGAAAAAATGCAAAGG 2577
||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 2534 ATGAGGAGACTCTAGCTAAATGCAGAGACCTTCAAGAAAAGATGCAAAGG 2583
Score = 459 bits (248), Expect = 9e-128
Identities = 299/324 (92%), Gaps = 2/324 (1%)
Strand=Plus/Plus
Query 2606 CTTGTCAAGAAACAATTCACTTACTCAGCCAACAGTTACAATCCTTACAGCCACAGGGCA 2665
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2669 CTTGTCAAGAAACAATTCACTTACTCAGCCAACAGTTACAATCCTTACAGCCACAGAGCA 2728
Query 2666 ACCACATTCTCAAATCTCAATCCCCTGAGAAGAAACTTCAAAAGCACAAAACCTCAGAAC 2725
|||||||||||||||||| |||||||||||||| ||||| |||||||| ||||||||
Sbjct 2729 ACCACATTCTCAAATCTCGGTCCCCTGAGAAGAAGTTTCAACAGCACAAAGCCTCAGAAG 2788
Query 2726 TAACACCAAACTCTGGACTAGATGATCTTCCTCATACTAATATCATTCAACCATCTCGTT 2785
||||||||||||||| ||||||||||||||| ||| | |||||||||||||||||||||
Sbjct 2789 TAACACCAAACTCTGCACTAGATGATCTTCCACATGTTCATATCATTCAACCATCTCGTT 2848
Query 2786 CTGTTA-GACACACGGTGAATCCAACGGTCCATGCTATCATCAAGTCTAGCTCTGTTTCT 2844
|||||| | ||||| ||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 2849 CTGTTAAG-CACACAGTGAATCCAACGGTCCACGCTATCATGAAGTCTAGCTCTGTTTCT 2907
Query 2845 TCATCCTCTAAAGAAGATAATGAGAAGCATACACGAGGATTAGGCCGTTTCTTCTCATCT 2904
|| || |||||||||||||||||||||||||| ||||||||||| ||||||||||| |||
Sbjct 2908 TCCTCTTCTAAAGAAGATAATGAGAAGCATACGCGAGGATTAGGTCGTTTCTTCTCCTCT 2967
Query 2905 AAACCGAAGAACAGTGGACGTTAA 2928
||| |||||||||||| |||||||
Sbjct 2968 AAATCGAAGAACAGTGCACGTTAA 2991
> AT2G24470.1 | Symbols: | Plant protein of unknown function (DUF869)
| chr2:10395828-10396622 REVERSE LENGTH=279
Length=279
Score = 294 bits (159), Expect = 3e-78
Identities = 212/236 (90%), Gaps = 9/236 (4%)
Strand=Plus/Plus
Query 468 AGATGAA-AGTGACCAGAAGCTGCAAGATGTGATTCTTGCCAAAACCACTCA-TTGGGAC 525
|||| || ||||||||||||||||||||||||| |||||| || |||||||| | ||||
Sbjct 48 AGAT-AAGAGTGACCAGAAGCTGCAAGATGTGACTCTTGCTAAGACCACTCACTGGGGA- 105
Query 526 AAGATCAAAGCCGA-GCTTGAAGGTAAGATCGATGAGTTGAGCCAGGGACTTCACCGGGC 584
|||||||||| | | |||||||| ||||||||||| |||||||| ||||||||||| |
Sbjct 106 AAGATCAAAG-CTATGCTTGAAGAAAAGATCGATGAATTGAGCCAAGGACTTCACCGAGT 164
Query 585 AGCTTCTGACAATGCAGCACTCACTAGATCGTTACAAGAACGATCGGAGATGATTA-TAA 643
||||||||||||||||||||||||||||||||| ||||||||||| ||||||| || |||
Sbjct 165 AGCTTCTGACAATGCAGCACTCACTAGATCGTTGCAAGAACGATCTGAGATGA-TAGTAA 223
Query 644 GGATTAGTGAGGAAAGGTCTAAAGCTGAAGCTGATGTGGAAAAGCTGAA-GACTAA 698
|||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 224 AGATTAGTGAGGAGAGGTCTAAAGCTGAAGCTGATGTGGAAAAGCTGAAAGACTAA 279
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 145534301643
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5