BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491031
Length=2351
Score E
Sequences producing significant alignments: (Bits) Value
AT4G36030.1 | Symbols: ARO3 | armadillo repeat only 3 | chr4:17... 3576 0.0
AT4G36032.1 | Symbols: | Potential natural antisense gene, loc... 3539 0.0
> AT4G36030.1 | Symbols: ARO3 | armadillo repeat only 3 | chr4:17044945-17047315
REVERSE LENGTH=2371
Length=2371
Score = 3576 bits (1936), Expect = 0.0
Identities = 2134/2230 (96%), Gaps = 11/2230 (0%)
Strand=Plus/Plus
Query 1 GACGACTTGGTAAATGTACTAATAAGTAATTTACTCCGACAACGAAAGCCGGCGACGACC 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 9 GACGACTTGGTAAATGTACTAATAAGTAATTTACTCCGACAACGAAAGCCGGCGACGACC 68
Query 61 GGCGTGTTCTGTAAGAAATACATTAGAAATGAAAGAAACCGTGTTTCAAAGACCAAACCA 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 69 GGCGTGTTCTGTAAGAAATACATTAGAAATGACAGAAACCGTGTTTCAAAGACCAAACCA 128
Query 121 AACCAAA-CCCAACAAAATGTTTCTTCATTTTCTTTAAAATTAAGATCAACCCGTTTCTG 179
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 129 AACCAAACCCCAACAAAATGTTTCTTCATTTTCTTTAAAATTAAGATCAACCCGTTTTTG 188
Query 180 ATTTTCTTGATC-TAAACCAGTTTTGTTAGGCTATGGGTGATCTAGCCAAGCAGATATTG 238
|||||||||||| | ||||||||| |||| | |||||||||||||||||||||||||||
Sbjct 189 ATTTTCTTGATCGT-AACCAGTTTCGTTA-TCCATGGGTGATCTAGCCAAGCAGATATTG 246
Query 239 TCTCGACCGATTCAACTCGCAGACCAAGTTGTGAAAGCCGGAGATGAAGCCACAATCAAC 298
||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 247 TCTCGCCCGATTCAACTTGCAGACCAAGTGGTGAAAGCCGGAGATGAAGCCACAATCAAC 306
Query 299 AAACAAGAATGTGCCGATATCAAGTCCAAGACGGAAAAGCTCGCTGCTCTTCTCCGTCAA 358
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 307 AAACAAGAATGTGCCGATATCAAGTCCAAAACGGAAAAGCTCGCTGCTCTTCTCCGTCAA 366
Query 359 GCGGCGCGCT-CAAGCTCCGACCTCTACGAACGTCCCACGCGCCGTATCATCGACGACAC 417
||||| || | |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 367 GCGGCCCG-TGCAAGCTCCGACCTCTACGAACGTCCCACGCGCCGTATCCTCGACGACAC 425
Query 418 TGAAAACGTTCTTGAAAAAGCATTGACGATGGTCCAAAGATGCCGTGACGATGGCTACAT 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 426 TGAAAACGTTCTTGAAAAAGCATTGACGATGGTCCAAAGATGCCGTGACGATGGCTACAT 485
Query 478 AATGCGTCTTTTCAACATAATCCCCGCCGCAGCATTCCGTAAAATGATTTCTCAACTAGA 537
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 486 AATGCGACTTTTCAACATAATCCCCGCCGCAGCATTCCGTAAAATGATTTCTCAACTAGA 545
Query 538 AAACTCCGTCGGCGATGTCTCTTGGCTCCTCCGTGTCTCAACTCCCGCCGGTAACGACGA 597
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 546 AAACTCCGTCGGCGACGTCTCTTGGCTCCTCCGTGTCTCAACTCCAGCCGGTAACGATGA 605
Query 598 CGACGAAGGATTTGGTTACTTAGGTCTCCCTCCAATCGCAGCCAACGAACCAATCTTATG 657
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 606 CGACGAAGGGTTTGGTTACTTAGGTCTCCCGCCAATCGCAGCCAACGAACCAATCTTGTG 665
Query 658 CTTAATTTGGGAACAAATCGCGGTTTTGATGACCGGTTCGCCGGAAGATAAATCCGACGC 717
||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 666 CTTAATTTGGGAACAAATCGCGGTTCTGATGACCGGTTCGCCGGAAGATAAATCAGACGC 725
Query 718 CGCCGCGTCCTTGGCTTCGTTAGCAAGAGATAACGACAGATACGTGAAATTGATAGTTGA 777
||||||||| |||||||| ||||||||||||||||| |||||||||||| ||||||||||
Sbjct 726 CGCCGCGTCGTTGGCTTCTTTAGCAAGAGATAACGATAGATACGTGAAACTGATAGTTGA 785
Query 778 AGAAGGTGGAGTCAACCCTTTGTTAAAACTTCTGAAAGAAGGTAAAATCGACGGTCAAGA 837
|||||| ||||||||||||||||| |||||| | ||||||||||||||||||||||||||
Sbjct 786 AGAAGGCGGAGTCAACCCTTTGTTGAAACTTGTAAAAGAAGGTAAAATCGACGGTCAAGA 845
Query 838 AAACGCGGCGAGAACAATCGGGTTATTGGGTCGTGACCCGGAAAGTGTTGAACATATGAT 897
|||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct 846 AAACGCAGCGAGAACAATCGGGTTACTGGGTCGTGACCCGGAAAGTGTTGAGCATATGAT 905
Query 898 TCAGCTTGGTGTTTGTTCAGTTCTTTCAAGTATTCTTAAAGAAGGCTCGATGAAGGTTCA 957
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 906 TCAGCTTGGTGTTTGTTCAGTGCTTTCAAGTATTCTTAAAGAAGGTTCGATGAAGGTTCA 965
Query 958 AGCCGTTGTGGCTTGGGCTGTTTCAGAGCTTGTTTCTGGTAATCACGCCAAATGTCAAGA 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 966 AGCCGTTGTGGCTTGGGCTGTTTCAGAGCTTGTTTCTGGTAATCACGCCAAATGTCAAGA 1025
Query 1018 ACTGTTCGCGCAAAACAACGTGATTAGGCTTCTTGTGAGTCATTTAGCGTTTGAAACGGT 1077
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1026 ACTGTTTGCGCAAAACAACGTGATTAGGCTTCTTGTGAGTCATTTAGCGTTTGAAACGGT 1085
Query 1078 TCAAGAACATAGCAAATACGCGGTTGTTGCGGGTAGAGCTACGTCGATGCACCACGCCGT 1137
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 1086 TCAAGAACATAGCAAATACGCGGTTGTTGCGGGTAGAGCAACGTCGATGCATCACGCCGT 1145
Query 1138 CGTGATGGCTAGCAAAATCAGTACTAGTAAAGAGAATTTACCGACGTTGAACGAGGAGGA 1197
||| ||||| || |||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct 1146 CGTAATGGCGAGTAAAATCAGTAGTAGTAAAGAGAATTTACCGGCGTTGAACGAGGAGGA 1205
Query 1198 GGACGA---TAATCAGATGGGAATCTCGAATCCGATGCCGAATCAGATGCATAGCATCGT 1254
|||||| |||||| || ||| |||||| ||||||| ||||||||||||||||||||||
Sbjct 1206 GGACGACGATAATCATATCGGAGTCTCGAGTCCGATGACGAATCAGATGCATAGCATCGT 1265
Query 1255 TGCAACAACAATGGCGATGAAAGCGGTTGGATCGGGATCGAAATCGAATCTGTCTAGCCG 1314
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 1266 TGCAACAACAATGGCGATGAAAGCGGTTGGATCAGGATCGAAATCGAATCTTTCTAGCCG 1325
Query 1315 ATTTGTTACCGGTGACGACGAGAAACCGCCGGAAAAGCTGCCGGAGAAGAGTTATAGTAT 1374
|||||||||||| |||||||| ||||| ||||||||| | ||||||||||||||||||||
Sbjct 1326 ATTTGTTACCGGCGACGACGATAAACCCCCGGAAAAGATACCGGAGAAGAGTTATAGTAT 1385
Query 1375 GAGTTCACAGCTCAAGGCTTACGGTAGTA-CGGCACATCAATCGAGAAACGCGTCGGTGA 1433
|||||||||| |||||||||||||||||| || ||||||||||| |||||||||||||||
Sbjct 1386 GAGTTCACAGATCAAGGCTTACGGTAGTATCG-CACATCAATCGCGAAACGCGTCGGTGA 1444
Query 1434 CGAGAGGGAGAGAGCTTGAAGATCCGGTGACGAAGACTTACATGAAAGCGATGGCGGCGA 1493
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1445 CGAGAGGGAGAGAGCTTGAAGATCCGGTGACGAAGACTTATATGAAAGCGATGGCGGCGA 1504
Query 1494 GAGCGTTGTGGAAACTCGCTGTAGGAAACTCATCGATCTGCCGAGTCATCACCGAGTCAC 1553
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1505 GAGCGTTATGGAAACTCGCTGTAGGAAACTCATCGATCTGCCGAGTCATCACCGAGTCAC 1564
Query 1554 GAGCTTTGCTCTGTTTTGCGGTTTTACTAGACAAAGGAGACGATGAAACCAAGTATAACA 1613
||||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||
Sbjct 1565 GAGCTTTACTCTGTTTTGCGGTTTTACTAGACAAAGGAGACGAAGAGACTAAGTATAACA 1624
Query 1614 CAGCGATGGCTATAATGGAGATAACCGCCGTGGCTGAAGAAAACGCAGATCTGAGACGAT 1673
|||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct 1625 CAGCTATGGCTATCATGGAGATAACCGCCGTGGCTGAGGAAAACGCAGATCTGAGAAGAT 1684
Query 1674 CCGCGTTCAGACGCACTTCACCGGCGTGCAAAGCGGTGGTTGACCAATTATTCCGAATCG 1733
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1685 CCGCGTTCAGACGCACTTCACCGGCGTGCAAAGCGGTGGTTGACCAGTTATTCCGAATCG 1744
Query 1734 TTGAAAACGCCGACGCCGGATCCGATTTACTCATCCCCTGTGTCAGATCCATCGGAAACC 1793
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1745 TTGAAAACGCCGACGCCGGATCCGATTTACTCATCCCCTGTGTAAGATCCATCGGAAACC 1804
Query 1794 TAGCTAGAACATTCAAATCCGCGGAAACGCATATGATCGTGCCTCTGGTTAAACTCCTCG 1853
|||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 1805 TAGCGAGAACGTTCAAATCAGCGGAAACGCATATGATCGTGCCTCTGGTAAAACTCCTCG 1864
Query 1854 ACGACGGAGAACCAGATTTAGCGGCGGAGGTAGCGATCGCGTTAGCGAAATTCGCGACAG 1913
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1865 ACGACGGAGAACCAGATTTAGCGGCGGAGGTAGCGATCGCGTTAGCGAAATTCGCGACGG 1924
Query 1914 AGGATAACTTTTTAGGAAAAGATCACTCGAGGACGATCATCGAAGCTGGAGGATCAAAGC 1973
|||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 1925 AGGATAACTTTTTAGGGAAAGAACACTCGAGGACAATCATCGAAGCTGGAGGATCAAAGC 1984
Query 1974 TTCTAGTTCAACTAGCGTATTTCGGAGAGAAAGGAGCTCAGATTCCGGCGATGGTTTTGT 2033
|||| ||||| ||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 1985 TTCTGGTTCAGTTAGCGTATTTCGGAGAGAACGGAGCACAGATTCCGGCGATGGTTTTGC 2044
Query 2034 TGAGCTACGTGGCGATGAATGTTCCAGACAGTGAACAGTTAGCGAAAGACGAAGTGTTAA 2093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2045 TGAGCTACGTGGCGATGAATGTTCCAGACAGTGAACAGTTAGCGAAAGACGAAGTGTTAA 2104
Query 2094 CGGTATTGGAATGGTCATCGAAGCAAGCTTATGTAATTGAAGATGAAGATATGGAAGCTT 2153
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 2105 CGGTATTGGAATGGTCATCGAAGCAAGCTAATGTACTTGAAGATGAAGATATGGAAGCTT 2164
Query 2154 TGTTGTATGAAGCTAAGAGCAGACTCGAGCTTTACCAATCCAGAGGATCCAGAGGCTTTC 2213
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 2165 TGTTGTATGAAGCTAAGAGCAGACTCGAGCTTTACCAATCAAGAGGATCTAGAGGCTTTC 2224
Query 2214 ACTTGTAATT 2223
||||||||||
Sbjct 2225 ACTTGTAATT 2234
> AT4G36032.1 | Symbols: | Potential natural antisense gene, locus
overlaps with AT4G36030 | chr4:17045092-17047297 FORWARD
LENGTH=2206
Length=2206
Score = 3539 bits (1916), Expect = 0.0
Identities = 2114/2210 (96%), Gaps = 11/2210 (0%)
Strand=Plus/Minus
Query 11 TAAATGTACTAATAAGTAATTTACTCCGACAACGAAAGCCGGCGACGACCGGCGTGTTCT 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2206 TAAATGTACTAATAAGTAATTTACTCCGACAACGAAAGCCGGCGACGACCGGCGTGTTCT 2147
Query 71 GTAAGAAATACATTAGAAATGAAAGAAACCGTGTTTCAAAGACCAAACCAAACCAAA-CC 129
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct 2146 GTAAGAAATACATTAGAAATGACAGAAACCGTGTTTCAAAGACCAAACCAAACCAAACCC 2087
Query 130 CAACAAAATGTTTCTTCATTTTCTTTAAAATTAAGATCAACCCGTTTCTGATTTTCTTGA 189
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2086 CAACAAAATGTTTCTTCATTTTCTTTAAAATTAAGATCAACCCGTTTTTGATTTTCTTGA 2027
Query 190 TC-TAAACCAGTTTTGTTAGGCTATGGGTGATCTAGCCAAGCAGATATTGTCTCGACCGA 248
|| | ||||||||| |||| | |||||||||||||||||||||||||||||||| ||||
Sbjct 2026 TCGT-AACCAGTTTCGTTA-TCCATGGGTGATCTAGCCAAGCAGATATTGTCTCGCCCGA 1969
Query 249 TTCAACTCGCAGACCAAGTTGTGAAAGCCGGAGATGAAGCCACAATCAACAAACAAGAAT 308
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1968 TTCAACTTGCAGACCAAGTGGTGAAAGCCGGAGATGAAGCCACAATCAACAAACAAGAAT 1909
Query 309 GTGCCGATATCAAGTCCAAGACGGAAAAGCTCGCTGCTCTTCTCCGTCAAGCGGCGCGCT 368
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct 1908 GTGCCGATATCAAGTCCAAAACGGAAAAGCTCGCTGCTCTTCTCCGTCAAGCGGCCCG-T 1850
Query 369 -CAAGCTCCGACCTCTACGAACGTCCCACGCGCCGTATCATCGACGACACTGAAAACGTT 427
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1849 GCAAGCTCCGACCTCTACGAACGTCCCACGCGCCGTATCCTCGACGACACTGAAAACGTT 1790
Query 428 CTTGAAAAAGCATTGACGATGGTCCAAAGATGCCGTGACGATGGCTACATAATGCGTCTT 487
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1789 CTTGAAAAAGCATTGACGATGGTCCAAAGATGCCGTGACGATGGCTACATAATGCGACTT 1730
Query 488 TTCAACATAATCCCCGCCGCAGCATTCCGTAAAATGATTTCTCAACTAGAAAACTCCGTC 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1729 TTCAACATAATCCCCGCCGCAGCATTCCGTAAAATGATTTCTCAACTAGAAAACTCCGTC 1670
Query 548 GGCGATGTCTCTTGGCTCCTCCGTGTCTCAACTCCCGCCGGTAACGACGACGACGAAGGA 607
||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 1669 GGCGACGTCTCTTGGCTCCTCCGTGTCTCAACTCCAGCCGGTAACGATGACGACGAAGGG 1610
Query 608 TTTGGTTACTTAGGTCTCCCTCCAATCGCAGCCAACGAACCAATCTTATGCTTAATTTGG 667
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 1609 TTTGGTTACTTAGGTCTCCCGCCAATCGCAGCCAACGAACCAATCTTGTGCTTAATTTGG 1550
Query 668 GAACAAATCGCGGTTTTGATGACCGGTTCGCCGGAAGATAAATCCGACGCCGCCGCGTCC 727
||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1549 GAACAAATCGCGGTTCTGATGACCGGTTCGCCGGAAGATAAATCAGACGCCGCCGCGTCG 1490
Query 728 TTGGCTTCGTTAGCAAGAGATAACGACAGATACGTGAAATTGATAGTTGAAGAAGGTGGA 787
|||||||| ||||||||||||||||| |||||||||||| |||||||||||||||| |||
Sbjct 1489 TTGGCTTCTTTAGCAAGAGATAACGATAGATACGTGAAACTGATAGTTGAAGAAGGCGGA 1430
Query 788 GTCAACCCTTTGTTAAAACTTCTGAAAGAAGGTAAAATCGACGGTCAAGAAAACGCGGCG 847
|||||||||||||| |||||| | |||||||||||||||||||||||||||||||| |||
Sbjct 1429 GTCAACCCTTTGTTGAAACTTGTAAAAGAAGGTAAAATCGACGGTCAAGAAAACGCAGCG 1370
Query 848 AGAACAATCGGGTTATTGGGTCGTGACCCGGAAAGTGTTGAACATATGATTCAGCTTGGT 907
||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1369 AGAACAATCGGGTTACTGGGTCGTGACCCGGAAAGTGTTGAGCATATGATTCAGCTTGGT 1310
Query 908 GTTTGTTCAGTTCTTTCAAGTATTCTTAAAGAAGGCTCGATGAAGGTTCAAGCCGTTGTG 967
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1309 GTTTGTTCAGTGCTTTCAAGTATTCTTAAAGAAGGTTCGATGAAGGTTCAAGCCGTTGTG 1250
Query 968 GCTTGGGCTGTTTCAGAGCTTGTTTCTGGTAATCACGCCAAATGTCAAGAACTGTTCGCG 1027
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1249 GCTTGGGCTGTTTCAGAGCTTGTTTCTGGTAATCACGCCAAATGTCAAGAACTGTTTGCG 1190
Query 1028 CAAAACAACGTGATTAGGCTTCTTGTGAGTCATTTAGCGTTTGAAACGGTTCAAGAACAT 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1189 CAAAACAACGTGATTAGGCTTCTTGTGAGTCATTTAGCGTTTGAAACGGTTCAAGAACAT 1130
Query 1088 AGCAAATACGCGGTTGTTGCGGGTAGAGCTACGTCGATGCACCACGCCGTCGTGATGGCT 1147
||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||
Sbjct 1129 AGCAAATACGCGGTTGTTGCGGGTAGAGCAACGTCGATGCATCACGCCGTCGTAATGGCG 1070
Query 1148 AGCAAAATCAGTACTAGTAAAGAGAATTTACCGACGTTGAACGAGGAGGAGGACGA---T 1204
|| |||||||||| ||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 1069 AGTAAAATCAGTAGTAGTAAAGAGAATTTACCGGCGTTGAACGAGGAGGAGGACGACGAT 1010
Query 1205 AATCAGATGGGAATCTCGAATCCGATGCCGAATCAGATGCATAGCATCGTTGCAACAACA 1264
||||| || ||| |||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct 1009 AATCATATCGGAGTCTCGAGTCCGATGACGAATCAGATGCATAGCATCGTTGCAACAACA 950
Query 1265 ATGGCGATGAAAGCGGTTGGATCGGGATCGAAATCGAATCTGTCTAGCCGATTTGTTACC 1324
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 949 ATGGCGATGAAAGCGGTTGGATCAGGATCGAAATCGAATCTTTCTAGCCGATTTGTTACC 890
Query 1325 GGTGACGACGAGAAACCGCCGGAAAAGCTGCCGGAGAAGAGTTATAGTATGAGTTCACAG 1384
|| |||||||| ||||| ||||||||| | ||||||||||||||||||||||||||||||
Sbjct 889 GGCGACGACGATAAACCCCCGGAAAAGATACCGGAGAAGAGTTATAGTATGAGTTCACAG 830
Query 1385 CTCAAGGCTTACGGTAGTA-CGGCACATCAATCGAGAAACGCGTCGGTGACGAGAGGGAG 1443
|||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||
Sbjct 829 ATCAAGGCTTACGGTAGTATCG-CACATCAATCGCGAAACGCGTCGGTGACGAGAGGGAG 771
Query 1444 AGAGCTTGAAGATCCGGTGACGAAGACTTACATGAAAGCGATGGCGGCGAGAGCGTTGTG 1503
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 770 AGAGCTTGAAGATCCGGTGACGAAGACTTATATGAAAGCGATGGCGGCGAGAGCGTTATG 711
Query 1504 GAAACTCGCTGTAGGAAACTCATCGATCTGCCGAGTCATCACCGAGTCACGAGCTTTGCT 1563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 710 GAAACTCGCTGTAGGAAACTCATCGATCTGCCGAGTCATCACCGAGTCACGAGCTTTACT 651
Query 1564 CTGTTTTGCGGTTTTACTAGACAAAGGAGACGATGAAACCAAGTATAACACAGCGATGGC 1623
||||||||||||||||||||||||||||||||| || || |||||||||||||| |||||
Sbjct 650 CTGTTTTGCGGTTTTACTAGACAAAGGAGACGAAGAGACTAAGTATAACACAGCTATGGC 591
Query 1624 TATAATGGAGATAACCGCCGTGGCTGAAGAAAACGCAGATCTGAGACGATCCGCGTTCAG 1683
||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct 590 TATCATGGAGATAACCGCCGTGGCTGAGGAAAACGCAGATCTGAGAAGATCCGCGTTCAG 531
Query 1684 ACGCACTTCACCGGCGTGCAAAGCGGTGGTTGACCAATTATTCCGAATCGTTGAAAACGC 1743
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 530 ACGCACTTCACCGGCGTGCAAAGCGGTGGTTGACCAGTTATTCCGAATCGTTGAAAACGC 471
Query 1744 CGACGCCGGATCCGATTTACTCATCCCCTGTGTCAGATCCATCGGAAACCTAGCTAGAAC 1803
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 470 CGACGCCGGATCCGATTTACTCATCCCCTGTGTAAGATCCATCGGAAACCTAGCGAGAAC 411
Query 1804 ATTCAAATCCGCGGAAACGCATATGATCGTGCCTCTGGTTAAACTCCTCGACGACGGAGA 1863
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 410 GTTCAAATCAGCGGAAACGCATATGATCGTGCCTCTGGTAAAACTCCTCGACGACGGAGA 351
Query 1864 ACCAGATTTAGCGGCGGAGGTAGCGATCGCGTTAGCGAAATTCGCGACAGAGGATAACTT 1923
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 350 ACCAGATTTAGCGGCGGAGGTAGCGATCGCGTTAGCGAAATTCGCGACGGAGGATAACTT 291
Query 1924 TTTAGGAAAAGATCACTCGAGGACGATCATCGAAGCTGGAGGATCAAAGCTTCTAGTTCA 1983
|||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 290 TTTAGGGAAAGAACACTCGAGGACAATCATCGAAGCTGGAGGATCAAAGCTTCTGGTTCA 231
Query 1984 ACTAGCGTATTTCGGAGAGAAAGGAGCTCAGATTCCGGCGATGGTTTTGTTGAGCTACGT 2043
||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct 230 GTTAGCGTATTTCGGAGAGAACGGAGCACAGATTCCGGCGATGGTTTTGCTGAGCTACGT 171
Query 2044 GGCGATGAATGTTCCAGACAGTGAACAGTTAGCGAAAGACGAAGTGTTAACGGTATTGGA 2103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 170 GGCGATGAATGTTCCAGACAGTGAACAGTTAGCGAAAGACGAAGTGTTAACGGTATTGGA 111
Query 2104 ATGGTCATCGAAGCAAGCTTATGTAATTGAAGATGAAGATATGGAAGCTTTGTTGTATGA 2163
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 110 ATGGTCATCGAAGCAAGCTAATGTACTTGAAGATGAAGATATGGAAGCTTTGTTGTATGA 51
Query 2164 AGCTAAGAGCAGACTCGAGCTTTACCAATCCAGAGGATCCAGAGGCTTTC 2213
|||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 50 AGCTAAGAGCAGACTCGAGCTTTACCAATCAAGAGGATCTAGAGGCTTTC 1
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 116716267125
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5