BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491063
Length=3138
Score E
Sequences producing significant alignments: (Bits) Value
AT4G35790.1 | Symbols: ATPLDDELTA, PLDDELTA | phospholipase D d... 4819 0.0
> AT4G35790.1 | Symbols: ATPLDDELTA, PLDDELTA | phospholipase D
delta | chr4:16955518-16960170 REVERSE LENGTH=3158
Length=3158
Score = 4819 bits (2609), Expect = 0.0
Identities = 2987/3165 (94%), Gaps = 44/3165 (1%)
Strand=Plus/Plus
Query 2 CTCTCAGATCTACACGGAATAATGTCGTCAGTGAGCAAACAACTCCC-TCCACGTCGTCC 60
|||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 4 CTCTGAGATCTACACGGAATAATGTCGTCAGTGAGCAAACAACTCCCAT-CACGTCGTCC 62
Query 61 CTCCACGTGTCC-CGTCTTCTTCTTCCTTCCTTGTCTTTCTCTCTCAAATCATTTTACCT 119
|||||| ||||| | |||||| ||||||| ||||||||||||||||||||||||| ||||
Sbjct 63 CTCCACCTGTCCTC-TCTTCTCCTTCCTTGCTTGTCTTTCTCTCTCAAATCATTTCACCT 121
Query 120 -AAAATAATAAATATCTTTCATTTTCT------aaaaaaaaaaaaaaCTTTTCAAATTCA 172
||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct 122 AAAAATAATAAATATCTTTCGTTTTCTAAAGAAAAAAAAAAAAAAAACTTTTCAAATTCA 181
Query 173 TCTTTGGTTTCTGCAGCAGCAACAACAACCGAGCCCTgttcgttagggttttcggttttt 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 182 TCTTTGGTTTCTGCAGCAGCAACAACAACCGAGCCCTGTTCGTTAGGGTTTTCGGTTTTT 241
Query 233 gttagc--tt-ttcttcttcttcttcgttttcttcCACCTGATTTGTTGTAACCATGGCG 289
|||||| || ||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 242 GTTAGCTTTTCTTCTTCTTCTTCTTCGTTTCCTTCCACCTGAATTGTTGTAACCATGGCG 301
Query 290 GATAAAGCATCGGAGGACGTGGTGCTTTTACACGGTGACCTCGATTTGAAAATTGTTAAG 349
|| |||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 302 GAGAAAGTATCGGAGGACGTTATGCTTCTACACGGTGACCTCGATTTGAAAATTGTTAAG 361
Query 350 GCTAGGAGGTTACCTAACATGGATATGTTCTCAGAACATTTGCGCCGTGTTTTCACCGCT 409
|||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 362 GCTAGGAGGTTACCTAACATGGATATGTTCTCAGAACATTTGCGCCGTCTCTTCACCGCC 421
Query 410 TGTAACGCCTGTGCTAGA--C-CC---ACCGATGATGTCGATCCCAGAGATAGCGGCGAA 463
|||||||||||||||||| | || ||||||||||||||||||||||||| ||||||
Sbjct 422 TGTAACGCCTGTGCTAGACCCACCGATACCGATGATGTCGATCCCAGAGATAAAGGCGAA 481
Query 464 GTCGGTGATAGAAACATCCGTAGCCACCGTAAGGTTATCACCAGCGATCCGTACGTCACC 523
||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 482 TTCGGTGATAAAAACATCCGTAGCCACCGTAAGGTTATCACCAGCGATCCTTACGTCACC 541
Query 524 GTCGTCGTTCCTCAAGCCACTCTAGCTCGAACACGTGTTTTGAAAAACTCACAAGATCCT 583
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 542 GTCGTCGTTCCTCAAGCGACTCTAGCTCGAACACGTGTTTTGAAAAACTCACAAGAGCCT 601
Query 584 CTTTGGGACGAGCATTTCAACATCTCCGTAGCGCATCCGTTGGCTTATCTCGAGTTCCAG 643
|||||||||||| | |||||||| || ||||||||||||| ||||||||||||||||||
Sbjct 602 CTTTGGGACGAGAAATTCAACATTTCTATAGCGCATCCGTTTGCTTATCTCGAGTTCCAG 661
Query 644 GTCAAAGACGACGATGTTTTCGGTGCTCAAATCATTGGCACGGCTAAGATCCCGGTTCGT 703
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 662 GTCAAAGACGACGATGTTTTCGGTGCTCAAATCATTGGCACGGCTAAGATCCCGGTTCGA 721
Query 704 GACATCGCATCGGGAGAACGCATTTCTGGTTGGTTTCCTGTACTCGGTACTTCGGGAAAA 763
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 722 GACATCGCATCGGGAGAACGCATTTCTGGTTGGTTTCCTGTACTCGGTGCTTCGGGAAAA 781
Query 764 CCGCCTAAGGCAGAAACTGCTCTTTTCATCGATATGAAATTTACTCCGTTTGACCAGATC 823
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 782 CCGCCTAAGGCAGAAACTGCTATTTTCATCGATATGAAATTTACTCCGTTTGACCAGATC 841
Query 824 CATAGTTACCGATGTGGAATCGCCGGAGATCCGGACCGTAAAGGTGTTAAACGGACTTAT 883
||||| ||||||||||||||||||||||||||||| |||| ||||||| ||||||||||
Sbjct 842 CATAGCTACCGATGTGGAATCGCCGGAGATCCGGAGCGTAGGGGTGTTAGACGGACTTAT 901
Query 884 TTCCCTGTGAGGAAAGGAAGTCAGGTGAGGCTTTACCAGGACGCTCATGTTATGGACGGA 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 902 TTCCCTGTGAGGAAAGGAAGTCAGGTGAGGCTTTACCAGGACGCTCATGTTATGGACGGA 961
Query 944 ATGTTGCCGGAGATTGGGTTAGATAACGGGAAAGTTTATCAGCATGGAAAGTGTTGGGAA 1003
| |||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 962 ACGTTGCCGGCGATTGGGTTAGATAACGGGAAAGTTTATGAGCATGGGAAGTGTTGGGAA 1021
Query 1004 GATATATGTTATGCTGTATCTGAGGCTCATCATATGATTTACGTTGTTGGTTGGTCTGTC 1063
||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||
Sbjct 1022 GATATATGTTATGCTATATCTGAGGCTCACCATATGATTTACATTGTTGGTTGGTCTATC 1081
Query 1064 TTCCATAAGATTAAGCTTGTTAGGGAACCTACAAGGAAATTACCAAGAGGT-GGTGATTT 1122
||||||||||||||||||||||||||| |||| || || ||||||| | | ||| |
Sbjct 1082 TTCCATAAGATTAAGCTTGTTAGGGAA---ACAA--AAGTT-CCAAGAGATAAG-GATAT 1134
Query 1123 GACGCTTGGGGAATTGCTCAAATACAAATCAGAGGAAGGTGTTCGAGTTTTGCTTCTTGT 1182
|||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 1135 GACGCTTGGGGAATTGCTCAAATACAAATCCCAGGAAGGTGTTCGAGTTTTGCTACTTGT 1194
Query 1183 ATGGGATGATAAGACTTCTCATGATAAATTTGGGATAAGCACGCCTGGAGTTATGGGGAC 1242
||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct 1195 ATGGGATGATAAGACTTCTCATGATAAGTTTGGGATAAAAACGCCTGGAGTTATGGGGAC 1254
Query 1243 ACATGATGAAGAGACTAGGAAGTTCTTCAAGCATTCTTCTGTGATTTGCGTATTGTCACC 1302
||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1255 ACATGATGAGGAGACTAGGAAGTTCTTCAAGCATTCTTCTGTGATATGCGTTTTGTCACC 1314
Query 1303 CCGGTATGCCAGCAGTAAGCTTGGGTTGTTCAAACAACAGGCAAGTCCTATCTTTTCTAT 1362
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 1315 CCGGTATGCCAGCAGTAAGCTTGGGTTGTTCAAACAACAGGCAAGTCCTAGCTCTTCTAT 1374
Query 1363 ATATATGGTCATGACAGTTGTTGGCACTCTCTTTACACACCATCAAAAGTGTGTTCTTGT 1422
||||| |||||||||||||||| |||||||| || |||||||||||||||||||||||
Sbjct 1375 ATATA---TCATGACAGTTGTTGGAACTCTCTTCACGCACCATCAAAAGTGTGTTCTTGT 1431
Query 1423 AGACACTCAGGCTGTTGGGAATAATCGCAAGGTCACAGCTTTTATTGGAGGTATAGATCT 1482
|||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||
Sbjct 1432 AGACACTCAGGCTGTTGGTAATAATCGCAAGGTCACCGCTTTTATTGGAGGTCTAGATCT 1491
Query 1483 TTGTGATGGCCGCTATGACACACCTGAGCATAGGATACTCAAGGACCTTGACACTGTATT 1542
|||||||||||| ||||||||||||||||||||||||||| | || ||||||||||||||
Sbjct 1492 TTGTGATGGCCGTTATGACACACCTGAGCATAGGATACTCCACGATCTTGACACTGTATT 1551
Query 1543 TAAGGATGATTTTCACAACCCTACATTTCCTGCTGGTACTAAGGCTCCAAGACAACCTTG 1602
|||||||||||| ||||| ||||||||||| |||||||| ||||| ||||||||||||||
Sbjct 1552 TAAGGATGATTTCCACAATCCTACATTTCCAGCTGGTACCAAGGCCCCAAGACAACCTTG 1611
Query 1603 GCATGATTTGCACTGTAGGATAGATGGGCCTGCGGCATATGATGTTCTCATAAACTTTGA 1662
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1612 GCACGATTTGCACTGTAGGATAGATGGGCCTGCGGCATATGATGTTCTCATAAACTTTGA 1671
Query 1663 GCAGCGATGGAGAAAGGCAACACGATGGAAAGAGTTTAGCTTACGTTTAAAGGGGAAAAC 1722
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1672 GCAGCGATGGAGAAAGGCAACACGATGGAAGGAGTTTAGCTTACGTTTAAAGGGGAAAAC 1731
Query 1723 TCACTGGCAAGATGATGCTTTGATCCGGATAGGGCGCATATCATGGATTCTAAGTCCAGT 1782
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 1732 TCACTGGCAAGATGATGCTTTGATCCGGATAGGGCGTATATCATGGATTCTGAGTCCAGT 1791
Query 1783 GTTTAAATTTCTGAAGGATGGTACTACAATTATTCCAGAGGACGATCCATGTGTTTGGGT 1842
||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||
Sbjct 1792 GTTTAAATTTCTGAAGGATGGTACTTCGATAATTCCAGAGGACGATCCATGTGTTTGGGT 1851
Query 1843 TTCTAAAGAAGATGATCCTGAGAACTGGCATGTTCAGATATTCCGGTCTATCGACTCAGG 1902
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 1852 TTCTAAAGAAGATGATCCAGAGAACTGGCATGTTCAGATATTCCGTTCTATCGACTCAGG 1911
Query 1903 ATCCGTGAAAGGATTTCCAAAGTATGAAGATGAGGCTGAGGCCCAGCATCTGGAATGTGC 1962
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1912 ATCCGTGAAAGGATTTCCAAAATATGAAGATGAGGCTGAGGCCCAGCATCTGGAATGTGC 1971
Query 1963 CAAGCGTCTAGTTGTAGATAAAAGCATCCAGACTGCATACATCCAGACAATCAGATCTGC 2022
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1972 CAAGCGTCTTGTTGTAGATAAAAGCATCCAGACTGCATACATCCAGACAATCAGATCTGC 2031
Query 2023 TCAGCATTTCATATATATCGAGAATCAGTATTTCCTGGGTTCTTCTTATGCTTGGCCTTC 2082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2032 TCAGCATTTCATATATATCGAGAATCAGTATTTCCTGGGTTCTTCTTATGCTTGGCCTTC 2091
Query 2083 GTATAGAGATGCAGGAGCTGACAATCTTATTCCTATGGAGTTGGCTCTAAAGATTGTTAG 2142
|||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2092 TTATAGAGACGCAGGAGCTGACAATCTTATTCCTATGGAGTTGGCACTAAAGATTGTTAG 2151
Query 2143 TAAAATCAGAGCTAAGGAAAGATTTGCTGTATATGTTGTCATACCATTATGGCCTGAAGG 2202
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 2152 CAAAATCAGAGCTAAGGAAAGATTTGCCGTATATGTTGTCATACCATTGTGGCCTGAAGG 2211
Query 2203 CGACCCAAAGTCTGGCCCTGTGCAAGAAATTCTATATTGGCAGAGCCAAACTATGCAGAT 2262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2212 CGACCCAAAGTCTGGCCCTGTGCAAGAAATTCTATATTGGCAGAGCCAAACTATGCAGAT 2271
Query 2263 GATGTATGATGTTATAGCAAAAGAACTGAAAGCGGTGCAATCAGATGCTCATCCGCTCGA 2322
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2272 GATGTATGATGTTATAGCAAAAGAACTGAAAGCGGTGCAATCAGATGCTCATCCTCTCGA 2331
Query 2323 TTACCTTAACTTTTATTGCCTTGGTAAACGAGAGCAACCTCCAGATGATATGCCAGCCAC 2382
||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||
Sbjct 2332 TTACCTTAACTTTTACTGCCTTGGTAAACGAGAGCAGCTTCCAGATGATATGCCAGCCAC 2391
Query 2383 CAATGGCAATGTGGTATCGGATTCTTATAAGTTCCGGCGTTTCATGATTTACGTGCACGC 2442
|||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||||||||
Sbjct 2392 CAATGGCAGTGTGGTATCAGATTCTTATAATTTCCAGCGTTTCATGATTTACGTGCACGC 2451
Query 2443 AAAGGGGATGGTAGTAGATGATGAGTATGTGCTCATGGGATCTGCTAATATCAACCAAAG 2502
||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2452 AAAAGGGATGATAGTAGATGATGAGTATGTACTCATGGGATCTGCTAATATCAACCAAAG 2511
Query 2503 ATCTATGGCGGGCACCAAAGATACTGAAATCGCCATGGGCTCATACCAACCTAATCATAC 2562
||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2512 ATCTATGGCAGGCACCAAAGATACTGAAATCGCCATGGGCGCATACCAACCTAATCATAC 2571
Query 2563 ATGGGCTCACAAGGGAAAACACCCACGTGGCCAGGTGTATGGATACAGAATGTCACTATG 2622
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2572 ATGGGCTCACAAGGGAAGACACCCACGTGGCCAGGTGTATGGATACAGAATGTCACTATG 2631
Query 2623 GGCAGAGCATTTAGGCAAAACGGGAGATGAATTTGTGGAGCCAGCAGATCTGGAATGTGT 2682
||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||| |
Sbjct 2632 GGCAGAGCATTTAGGCAAAACTGGAGATGAGTTTGTGGAGCCATCAGATCTGGAATGTCT 2691
Query 2683 GAAGAACGTGAACAAAATCTCTGAAGGAAACTGGAAAAAATTCATAGACTCGAAATTCTC 2742
|||||| ||||||| ||||||||||| ||||||||||| |||||||||| ||||||||||
Sbjct 2692 GAAGAAGGTGAACACAATCTCTGAAGAAAACTGGAAAAGATTCATAGACCCGAAATTCTC 2751
Query 2743 GGAGCTACAAGGTCACTTAATAAAGTATCCTCTACAAGTGGATGTTGATGGTAAAGTAAG 2802
|||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 2752 AGAGCTACAAGGTCACTTAATAAAGTATCCTCTACAAGTAGACGTTGATGGTAAAGTAAG 2811
Query 2803 CCCTCTTCCTGATTACGAGAGTTTCCCAGATGTTGGTGGTAAGATCATTGGAGCTCATTC 2862
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2812 CCCTCTTCCTGATTACGAGACCTTCCCAGATGTTGGTGGTAAGATCATTGGAGCTCATTC 2871
Query 2863 CATGGCTCTTCCTGACACTTTAACCACGTAATGTTCATCATGTTTAATGTAAATTTCAGC 2922
|||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||
Sbjct 2872 CATGGCTCTTCCTGACACTTTAACCACGTAATGTG-A--ATGTTCAATGTAAATTTCAGC 2928
Query 2923 ATTT-TTT-GGG-TTTCTTTTGATCCTGAATAATAT-AGCTGAAAGTGTTGTTTGAGTTG 2978
|||| ||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2929 ATTTGTTTTGGGGTTTCTTTTGATCCTGAATAATATTAGCTGAAAGTGTTGTTTGAGTTG 2988
Query 2979 T---ACATTTAACTGTGTTGTTTCTTTTA-ATACATTCTTTTGTGATTGTCGTCAAATAT 3034
| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2989 TTGTACATTTAACTGTGTTGTTTCTTTTTTATACATTCTTTTGTGATTGTCGTCAAATAT 3048
Query 3035 ATGTTGAGGTGAAAAATGTAGAGATCGTGAGTGAGTGAAGAGGCAAAGTAATATGAGAAT 3094
||||| |||| ||||||||||||||||||||||||||||||||||| |||| |||| ||
Sbjct 3049 TTGTTGGGGTGCAAAATGTAGAGATCGTGAGTGAGTGAAGAGGCAAAATAATTTGAGGAT 3108
Query 3095 ATTCTGTTTTTCTCGttttt-ttCTTTCAAATTCGAATGATGATG 3138
||||| ||||||||| |||| || ||||||| ||| || ||||||
Sbjct 3109 ATTCTATTTTTCTCGGTTTTCTT-TTTCAAAATCGGATAATGATG 3152
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 156069359673
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5