BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491080 Length=1153 Score E Sequences producing significant alignments: (Bits) Value AT4G35660.1 | Symbols: | Arabidopsis protein of unknown functi... 1718 0.0 > AT4G35660.1 | Symbols: | Arabidopsis protein of unknown function (DUF241) | chr4:16912509-16913704 FORWARD LENGTH=1196 Length=1196 Score = 1718 bits (930), Expect = 0.0 Identities = 1091/1166 (94%), Gaps = 22/1166 (2%) Strand=Plus/Plus Query 1 AAAGCTTGACGTTGCTCCATTTATAACCACAAAGAGATTATTAAATAAATTAAGCAAAAG 60 |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 11 AAAGCTTGACGTTGCTCCATTTATAACCACAAAGAGATTATTAAAT---TT-AGCAAAAA 66 Query 61 GGGATAATTGTGCAAATATCCTCTTTATAAGttttttttttAACACATGCCCAATTTGCT 120 |||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||| Sbjct 67 GGGATAATTGTGCAGATATCCTCTTTATAAG--GTTTTTTAAACACATGCCCAATTTGCT 124 Query 121 CTTACATTAAAACC--TTT--TTAAAGGGTTATTTTGGATTTCTCTGTTAAGTTTTCTTC 176 |||||||||||||| ||| ||||||||||||||||||||| ||||||||||| || || Sbjct 125 CTTACATTAAAACCTTTTTAATTAAAGGGTTATTTTGGATTTATCTGTTAAGTTCTCCTC 184 Query 177 TATTATATACC-TTGGAGTCTCTGAACCTTTATAACCCACCAAAAACCATTTCCAAGTTT 235 ||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct 185 TATTATATACCTTTGAAGTCTCTGAACCTTTATAACCCACCAAAACCCATTTCCAAGTTT 244 Query 236 AAGTC-TTTTGATTTCTCTGTTTGCTTCAGAGCTTGGAAAAATGGCAG-A--ATCATCAT 291 ||| | |||||| |||||||||||||||||||||||| ||||||| | | |||||||| Sbjct 245 AAGGCTTTTTGACTTCTCTGTTTGCTTCAGAGCTTGG--AAATGGCTGAATCATCATCAT 302 Query 292 CCTCTGCGGTGACTACGCATGTACCTGCTAGGTCTATTAGTTTGCCTACAAGACTAATCC 351 |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 303 CCTCTGTAGCGACTACGCATGTACCTGCTAGGTCTATTAGTTTGCCTACAAGACTAATCC 362 Query 352 ATCCTAAAGCACAGAGAGTTGAAGAAGAACTGAAAAAGATTCAAGCTTTAAACTCTTCTT 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 363 ATCCTAAAGCACAGAGAGTTGAAGAAGAACTGAAAAAGATTCAAGCTTTAAACTCTTCTT 422 Query 412 CATCAGCTTCTTCTAGGATCAAACTTGGACTTGCCAAGCTCGTTGAGCTCTATGACTTTG 471 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 423 CATCAGCTTCTTCTCGGATCCAACTTGGACTTGCCAAGCTCGTTGAGCTCTATGACTTTG 482 Query 472 TCAATGAACAAGTCATATGTTCTCCTCAAGGCCAACAAGCTCTTCGCCTTTGTCGCAACG 531 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 483 TCAATGAACAAGTCATAAGTTCTCCTCAAGGCCAACAAGCTCTTCGCCTTTGTCGCAACA 542 Query 532 GGAAACTTGTGGAAGACTCTCTTGATGAATCCATCTTGTTACTAGATGTCTCTGACTTCA 591 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct 543 GGAAACTTGTGGAAGACGCTCTTGATGAATCCATCGTGTTACTAGATGTCTCTGACTTCA 602 Query 592 CAAGAGACTTGATAGGAACACTCATGGAGCAAATTCAAGAACTTCAATCTGCTTTACGTA 651 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct 603 CAAGAGACTTGATAGGAACACTCATGGAGCATATTCAAGAACTTCAATCCGCTTTACGTA 662 Query 652 GACGCAGAGGAAATCTCTCTTCCGTTCAGTCCGAGATCCGAACTTACATTAGCTTTCAGA 711 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct 663 GACGCAGAGGAAATCTCTCTTCCGTTCAGTCCGAGATCCGAAGTTACATTAGCTTTCACA 722 Query 712 AGAAGTTCAAGAACGCAGCAGATAGACAACTTAAATCCCTTGCAAGGACACAAAGAAAGA 771 |||| | ||||| || ||||| |||||| |||||||||||||||||| ||||| ||||| Sbjct 723 AGAAATCCAAGACCGAAGCAGCGAGACAAGTTAAATCCCTTGCAAGGAGACAAACAAAGA 782 Query 772 AAAAAGATCCGGTTATCAAACAATCTCG-TGATCTTGATCAACATTCTTCAATGGTCTCC 830 |||||| | ||||||||||||||| || || ||||||| |||||||||| ||||||||| Sbjct 783 AAAAAGCTTGGGTTATCAAACAATC-CGGTGGTCTTGATGAACATTCTTCTATGGTCTCC 841 Query 831 AACATTCTAAGGCAATCAAACGCGTCGACGATCTCTATTTTGCAGTCACTCTTGCAGTTT 890 || |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 842 AATATTCTAAGGCAATCAAACGCATCGACGATCTCTATTTTACAGTCACTCTTGCAGTTT 901 Query 891 CTTTCTTCTTCCGGTGAGAAC--C-AGAAGAAGAATGGTGAAATTGGATGTGTAGATAAC 947 |||||| |||||||||||||| | ||||||| ||||||||||||||||||||||||||| Sbjct 902 CTTTCTACTTCCGGTGAGAACAACGAGAAGAAAAATGGTGAAATTGGATGTGTAGATAAC 961 Query 948 TCGATGATCCGTTCTTTCTTTGGAAGAATCATCGGTAGGAAGATCGTGAAGGACATTGAT 1007 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct 962 TCGATGATCCGTTCTTTCTTTGGAAGAATCATCGGTAGGAAGATGGTGAAGGAGATTGAT 1021 Query 1008 GCGCAAACAATCCTCGGGAAATTAGCTATGGTTAATGCGAGCCTTGAAGCAATTAAGGAT 1067 ||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||| Sbjct 1022 GCGCAAACAATCCTCGGGAGATTAGCTATGGTTAATGTGAGCCTTGAGGCAATTAAGGAT 1081 Query 1068 GAGTTAAGTTACTTATCTAGACGACTTATTCAACATAGAGCGTCTCTCTTGAACATTGTT 1127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1082 GAGTTAAGTTACTTATCTAGACGACTTATTCAACATAGAGCGTCTCTCTTGAACATTGTT 1141 Query 1128 ACTCTATAACAATAAGAGTTTTGTAT 1153 |||||||||||| || | |||||||| Sbjct 1142 ACTCTATAACAAAAATAATTTTGTAT 1167 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 56576014215 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5