BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491097
Length=1627
Score E
Sequences producing significant alignments: (Bits) Value
AT4G35500.2 | Symbols: | Protein kinase superfamily protein | ... 2313 0.0
AT2G17530.1 | Symbols: | Protein kinase superfamily protein | ... 1293 0.0
> AT4G35500.2 | Symbols: | Protein kinase superfamily protein
| chr4:16857353-16859603 FORWARD LENGTH=1638
Length=1638
Score = 2313 bits (1252), Expect = 0.0
Identities = 1489/1598 (93%), Gaps = 37/1598 (2%)
Strand=Plus/Plus
Query 48 TCTTTCTCTCTCTTTGGGTCCTTGCCAAGATCCAATTTTTACGATCAAAATCGACCCGGT 107
||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 33 TCTTTGTCTTTGTTTGGGTCCTTGCCAAGATCCAATTTTTACGATCAAAATCGACCC--- 89
Query 108 GGTGGTATTCAGACACGTC-TTTAGATAGAGATATGTCGTGTTCATCTTCTTCCGGATCA 166
||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct 90 GGTGGAATTCAGACACGTCTTTTAGATAGAGATATGTCTTGTTCATCTTCTTCCGGATCA 149
Query 167 GAAGGAGAAGAAGAAGGTTTCGATGCTTACCGTAAAGGTGGTTATCACGCCGTCAGGATC 226
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 150 GAAGGAGAAGAAGAGGGTTTCGATGCTTACCGTAAAGGTGGTTATCACGCCGTCAGGATC 209
Query 227 GGCGATCCTTTTTCCGGTGGTCGTTACATCGCTCAGAGAAAGCTTGGTTGGGGTCAATTC 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 210 GGCGATCCTTTTTCCGGTGGTCGTTACATCGCTCAGAGAAAGCTTGGTTGGGGTCAATTC 269
Query 287 TCCACCGTTTGGCTTGCCTACGATACTCGCACCTCTAATTATGTTGCTTTG-AAGATTCA 345
|||||||||||||||||||||||||| | ||||||||| | | |||||||| | | ||
Sbjct 270 TCCACCGTTTGGCTTGCCTACGATACGCTCACCTCTAA-TGTTTTGCTTTGTATG-TTTT 327
Query 346 GAAG-AGC---GCACAACAGTTTGCTCAAGCTGCACTTCACGAAATCGAGTTCCTTTCAG 401
| | | |||||||| ||||||||||||||||||||||||||||| || |||||||
Sbjct 328 TATGTCTCTTTGCACAACAATTTGCTCAAGCTGCACTTCACGAAATCGAATTTCTTTCAG 387
Query 402 CTGCTGCTGATGGAGATCTCGCCAATACGAAATGTGTTGTTCGTCTTATTGACCATTTCA 461
||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 388 CTGCTGCTGATGGGGATCTCGACAAGACGAAATGTGTTGTTCGTCTTATTGACCATTTCA 447
Query 462 AGCATACTGGTCCAAATGGGCAGCATTTATGTATGGTGCTTGAGTTTCTTGGTGATAGCT 521
|||||| |||||||||||||||||||||||| ||||||||||||||||| || |||||||
Sbjct 448 AGCATAGTGGTCCAAATGGGCAGCATTTATGCATGGTGCTTGAGTTTCTCGGCGATAGCT 507
Query 522 TGCTCCGTTTAATCAGATACAACCATTACAAAGGTCTGAAAATAAATAAAGTCCGGGAGA 581
||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||
Sbjct 508 TGCTCCGTTTAATCAGATACAACCAGTACAAAGGTCTGAAACTGAATAAAGTCCGGGAGA 567
Query 582 TTTGCAGATGTATATTGACTGGTTTAGATTATTTGCACCGTGAGCTCGGTATGATTCACT 641
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 568 TTTGCAGATGTATACTGACTGGTTTAGATTATTTGCACCGTGAGCTCGGTATGATTCACT 627
Query 642 CCGACTTAAAACCTGAAAACATTCTTCTTTGTTCCACCATTGACCCTGCCAAAGATCCCG 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 628 CCGACTTAAAACCTGAAAACATTCTTCTTTGTTCCACCATTGACCCTGCCAAAGATCCCG 687
Query 702 TTAGATCTGGACTAACCCCACTATTAGAAAAGCCAGAGGGAAACGCAAACGGTGGTGGAT 761
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| | ||
Sbjct 688 TTAGATCTGGACTCACCCCACTATTAGAAAAACCAGAGGGAAACGCAAACGGTGGCGCAT 747
Query 762 CCACTATGAATCTGATTGAGAAGAAGCTAAAGAGAAGAGCAAAAAGAGCGGTTGCTAAAA 821
| || |||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 748 CAACAATGAATCTGATTGAGAAGAAACTAAAGAGAAGAGCGAAAAGAGCGGTTGCTAAAA 807
Query 822 TATCAGAAAGAAGAGTCTCAATGGTGGGTGCTACAGGTGAAGAAGCATCATCGAAGACAG 881
||||||||||||||||||||||||| | ||||||||||||||||||||||| || |
Sbjct 808 TATCAGAAAGAAGAGTCTCAATGGT---T---ACAGGTGAAGAAGCATCATCGAAAACGG 861
Query 882 AAAGAAGTCTTGATGGGATTGATATGAGATGCAAAGTGGTTGACTTTGGTAACGCTTGTT 941
||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 862 AAAAAAGTCTAGATGGGATTGATATGAGATGCAAAGTGGTTGACTTTGGTAACGCTTGTT 921
Query 942 GGGCTGATAAACAGTTTGCGGAAGAGATACAAACGAGACAGTATAGAGCTCCTGAAGTAA 1001
||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||
Sbjct 922 GGGCTGATAAACAGTTTGCTGAAGAGATACAAACAAGACAGTATCGAGCTCCTGAAGTAA 981
Query 1002 TACTTAAGTCAGGATACTCTTTCTCTGTTGATGTGTGGTCTTTTGGTTGTACGGCTTTCG 1061
|||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 982 TACTAAAGTCAGGATACTCTTTCTCTGTTGATATGTGGTCTTTTGGTTGTACGGCTTTCG 1041
Query 1062 AGCTTGTCACAGGAGATATGCTATTTGCTCCTAAAGATGGAAATGGTTATGGAGAAGACG 1121
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1042 AGCTTGTCACAGGAGATATGCTATTTGCACCTAAAGATGGAAATGGTTATGGGGAAGACG 1101
Query 1122 AGGATCACCTTGCTCTTATGATGGAACTCCTAGGAAAGATGCCTCGAAAGATTGCGATTG 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1102 AGGATCACCTTGCTCTTATGATGGAACTCCTAGGAAAGATGCCTCGAAAGATTGCCATTG 1161
Query 1182 GAGGGGCGAAATCCAAAGACTACTTTGACAGACACGGGGATTTAAAGAGAATCCGGCGGT 1241
||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 1162 GAGGGGCGAAATCGAAAGACTACTTTGACAGACACGGGGACTTAAAGAGAATCCGACGGT 1221
Query 1242 TGAAGTATTGGCCACTTGATCGCTTGCTGATTGATAAATATAAGCTTCCGGAAGCAGAAG 1301
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1222 TGAAATATTGGCCACTTGATCGCTTGCTGATTGATAAATATAAGCTTCCGGAAGCAGAAG 1281
Query 1302 CAAAGGATTTTGCCGAGTTTCTGACTCCGATTCTTGAGTTTGCGCCAGAGAAACGACCAA 1361
||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1282 CAAAGGAGTTTGCTGAGTTTCTGACTCCGATTCTTGAGTTTGCGCCGGAGAAACGACCAA 1341
Query 1362 CTGCTCAACAGTGCTTGGAACATCCATGGATGAATGTAACAACACAGGACAATGCAGATA 1421
||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||| |
Sbjct 1342 CTGCTCAACAGTGCTTGGATCATCCATGGATGAATGTAACAACACAGAACGATGCAGAAA 1401
Query 1422 ATGTAGATGCCCAAATGAACAACTTGCAGATCAAAGGGTGAGAGAAACTCAAActtcttc 1481
||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1402 ATGTAGATGACCAAATGAACAACTTGCATATCAAAGGGTGAGAGAAACTCAAACTTCTTG 1461
Query 1482 ttt-----gt--tt-cattcctttgttcattttcttttaatataactttcttcttctttt 1533
||| || || ||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct 1462 TTTTTTTTGTGGTTTCATTCCTTTGTTCGTTTTCTTTTAATATAACTTTCTTCTTCTCTT 1521
Query 1534 tatatcttttttttgttttgttttgtataattgt-tctttactttttgGAG--ACCTATG 1590
||||| |||||| ||||||| |||||| | ||||| ||||||| | |||||||
Sbjct 1522 TATATGTTTTTT--GTTTTGT-----ATAATT-TCTCTTTTTTTTTTGGGGGGACCTATG 1573
Query 1591 ATATATTGATT-AACCATCGATTTCATTTGTTGCTTAT 1627
||||||||||| ||||||||| ||||||||||||||||
Sbjct 1574 ATATATTGATTTAACCATCGAGTTCATTTGTTGCTTAT 1611
> AT2G17530.1 | Symbols: | Protein kinase superfamily protein
| chr2:7626359-7629149 FORWARD LENGTH=2007
Length=2007
Score = 1293 bits (700), Expect = 0.0
Identities = 1140/1348 (85%), Gaps = 47/1348 (3%)
Strand=Plus/Plus
Query 130 AGATAGAGATATGTCGTGTTCATCTTCTTCCGGATCAGAAGG-AGAAGAAGAAGGTTTCG 188
||| |||||||||||||||||||| || || ||||||| ||| ||| || || |||||||
Sbjct 150 AGACAGAGATATGTCGTGTTCATCCTCATCTGGATCAG-AGGAAGACGATGAGGGTTTCG 208
Query 189 ATGCTTACCGTAAAGGTGGTTATCACGCCGTCAGGATCGGCGATCC-TTTTTCCGGTGGT 247
||||||||||||||||||| ||||||||||| || ||||| || || ||| |||||||
Sbjct 209 ATGCTTACCGTAAAGGTGGATATCACGCCGTTAGAATCGGAGA-CCAGTTTGCCGGTGGC 267
Query 248 CGTTACATCGCTCAGAGAAAGCTTGGTTGGGGTCAATTCTCCACCGTTTGGCTTGCCTAC 307
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 268 CGTTACATTGCTCAGAGAAAGCTTGGTTGGGGCCAATTCTCCACCGTTTGGCTTGCCTAT 327
Query 308 GATACTCGCACCTCTAATTATGTTGCTTTGAAGATTCAGAAGAGCGCAC-AACAGTTTGC 366
||||||||||| ||||||||||||||||||||||||||||||||||| | ||| |||||
Sbjct 328 GATACTCGCACTTCTAATTATGTTGCTTTGAAGATTCAGAAGAGCGC-CTTACAATTTGC 386
Query 367 TCAAGCTGCACTTCACGAAATCG-AGTTCCTTTC-AGCTGCTGCTGATGGAGAT-CTCGC 423
||||||||||||||| ||||||| | || | ||| ||||||||||||||| ||| || |
Sbjct 387 TCAAGCTGCACTTCATGAAATCGAACTT-C-TTCAAGCTGCTGCTGATGGGGATCCT-GA 443
Query 424 CAATACGAAATGTGTTGTTCGTCTTATTGACCATTTCAAGCATACTGGTCCAAATGGGCA 483
||||| || |||||| ||||||||||||| | |||||||| | ||||| || |||||
Sbjct 444 AAATACCAAGTGTGTTATTCGTCTTATTGATGACTTCAAGCACGCAGGTCCCAACGGGCA 503
Query 484 GCATTTATGTATGGTGCTTGAGTTTCTTGGTGATAGCTTGCTCCGTTTAATCAGATACAA 543
||||||||| |||||||| ||||||||||| ||||||||||| ||||| || | ||| ||
Sbjct 504 GCATTTATGCATGGTGCTCGAGTTTCTTGGCGATAGCTTGCTGCGTTTGATTAAATATAA 563
Query 544 CCATTACAAAGGTCTGAAAATAAATAAAGTCCGGGAGATTTGCAGATGTATATTGACTGG 603
|| ||| ||||| || | ||| |||||| |||||||| |||| ||||||| |||||||
Sbjct 564 CCGTTATAAAGGGATGGAGTTAAGTAAAGTGCGGGAGATATGCAAATGTATACTGACTGG 623
Query 604 TTTAGATTATTTGCACCGTGAGCTCGGTATGATTCACTCCGACTTAAAACCTGAAAACAT 663
| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 624 TCTAGATTATTTGCACCGTGAACTCGGTATGATTCACTCCGACTTAAAACCCGAAAACAT 683
Query 664 TCTTCTTTGTTCCACCATTGACCCTGCCAAAGATCCCGTTAGATCTGGACTAACCCC-AC 722
|||||||||||||||||||||||||||||| ||||| | ||||| |||||||| || |
Sbjct 684 TCTTCTTTGTTCCACCATTGACCCTGCCAAGGATCCTATCAGATCCGGACTAACACCGA- 742
Query 723 TATTAGAAAAGCCAGAGGGAAACGCAAA-CGGTGGTGGATCCACTATGAATCTGATTGAG 781
|| |||||||||| ||||| ||| |||| |||| ||| || |||||||||||||||
Sbjct 743 TACTAGAAAAGCCCGAGGGGAAC-CAAAACGGTAC---ATCAACAATGAATCTGATTGAG 798
Query 782 AAGAAGCTAAAGAGAAGAGCAAAAAGAGCGGTTGCTAAAATATCAGAAAGAAGAGTCTCA 841
|||||| | ||||| |||||||||| ||||| |||||||||||||| ||||||||| ||
Sbjct 799 AAGAAGTTGAAGAGGAGAGCAAAAAAAGCGGCTGCTAAAATATCAGGAAGAAGAGTTTCG 858
Query 842 ATGGTGGGTGCTACAGGTGAAGAAGCATC-ATCGAAGACAGAA-AGAAGTCTTG-ATGGG 898
|| || ||| || || |||| | || | | |||| | || |||| |||| |||||
Sbjct 859 ATAGTAGGTT-TA-AG-TGAA-A--CACCGAAA-AAGA-ACAAGAGAAA-CTTGGATGGG 909
Query 899 ATTGATATGAGATGCAAAGTGGTTGACTTTGGTAACGCTTGTTGGGCTGATAA-ACAGTT 957
|||||||||||||||||||| || ||||| || |||| |||||||||||||| | | ||
Sbjct 910 ATTGATATGAGATGCAAAGTTGTCGACTTCGGGAACGGGTGTTGGGCTGATAACAAA-TT 968
Query 958 TGCGGAAGAGATACAAACGAGACAGTATAGAGCTCCTGAAGTAATACTTAAGTCAGGATA 1017
||| ||||| |||||||| |||||||| ||||||||||||||||||||| ||||||| ||
Sbjct 969 TGCAGAAGAAATACAAACAAGACAGTACAGAGCTCCTGAAGTAATACTTCAGTCAGGTTA 1028
Query 1018 CTCTTTCTCTGTTGATGTGTGGTCTTTTGGTTGTACGGCTTTCGAGCTTG-TCACAGGAG 1076
||||| |||||||||| |||||||||| | |||||| ||||| ||||||| | ||||| |
Sbjct 1029 CTCTTACTCTGTTGATATGTGGTCTTTCGCTTGTACTGCTTTTGAGCTTGCT-ACAGGCG 1087
Query 1077 ATATGCTATTT-GCTCCTAAAGATGGAAATGGTTATGGAGAAGACGAGGATCACCTTGCT 1135
||||||| ||| ||||| ||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 1088 ATATGCT-TTTCGCTCCAAAAGAGGGAAATGGTTACGGAGAAGACGAGGACCACCTTGCT 1146
Query 1136 CTTATGATGGAACTCCTAGGAAAGATGCCTCGAAAGATTGCGATTGGAGGGGCGAAATCC 1195
||||||||||||||| ||||||| ||||||||||||||||| |||||||| |||| |||
Sbjct 1147 CTTATGATGGAACTCTTAGGAAAAATGCCTCGAAAGATTGCCATTGGAGGTGCGAGATC- 1205
Query 1196 AAAG-ACTACTTTGACAGACACGGGGATTTAAAGAGAATCCGGCGGTTGAAGTATTGGCC 1254
|||| | ||||||||||||||||| || || ||||| |||||| | || || || |||||
Sbjct 1206 AAAGGATTACTTTGACAGACACGGCGACTTGAAGAGGATCCGGAGATTAAAATACTGGCC 1265
Query 1255 ACTTGATCGCTTGCTGATTGATAAATATAAGCTTCCGGAAGCAGAAGCAA-AGGATTTTG 1313
||| || || || |||||||||||||| |||||||| |||||||||||| || |||| |
Sbjct 1266 ACTCGACCGTTTACTGATTGATAAATACAAGCTTCCAGAAGCAGAAGCACGAGAATTT-G 1324
Query 1314 CCGAGTTTCTGACT-CC-GATTCTTGAGTTTGCGCCAGAGAAACGACCAACTGCTCAACA 1371
| || ||||| || || ||| | || ||||| || ||||||||||||||||| |||||
Sbjct 1325 CGGATTTTCT--CTGCCCGATAATGGATTTTGCACCTGAGAAACGACCAACTGCACAACA 1382
Query 1372 GTG-CTTGGAACATCCATGGATGAATGTAACAACACAGGACAATGCAGATAATGTAGATG 1430
|| || | ||||||||||| ||||| ||| |||||| |||||| |||| || |||| |
Sbjct 1383 ATGTCT-GCAACATCCATGGTTGAATCTAAGGACACAGAACAATGAAGATGATATAGAAG 1441
Query 1431 CCCAAATGAACAACTTGCAGATCAAAGG 1458
|| |||| ||| |||||||||||||
Sbjct 1442 GTCAGATGAGTAACATGCAGATCAAAGG 1469
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80371072545
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5