BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491107
Length=1120
Score E
Sequences producing significant alignments: (Bits) Value
AT4G35420.1 | Symbols: DRL1 | dihydroflavonol 4-reductase-like1... 1705 0.0
> AT4G35420.1 | Symbols: DRL1 | dihydroflavonol 4-reductase-like1
| chr4:16833933-16835619 REVERSE LENGTH=1147
Length=1147
Score = 1705 bits (923), Expect = 0.0
Identities = 1027/1079 (95%), Gaps = 0/1079 (0%)
Strand=Plus/Plus
Query 1 ACCAGAAAATGGATCAAGGAAAGGCAAAAGTCTGTGTTACCGGGGCTTCAGGCTTCTTGG 60
||| |||||||||||||| ||||| ||||||||||||||| || ||||||||||||||||
Sbjct 1 ACCGGAAAATGGATCAAGCAAAGGGAAAAGTCTGTGTTACTGGTGCTTCAGGCTTCTTGG 60
Query 61 CTTCTTGGCTTGTGAAGAGGCTTCTGCTTGAGGGATATGAAGTTATTGGAACAGTCAGAG 120
||||||||||||| ||||||||||| ||||| |||||||||||||| |||||||||||||
Sbjct 61 CTTCTTGGCTTGTAAAGAGGCTTCTACTTGAAGGATATGAAGTTATCGGAACAGTCAGAG 120
Query 121 ATCCAGGAAATGAGAAGAAACTCGCACACCTATGGAAGTTGGAAGGGGCAAAGGAGAGAC 180
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 121 ATCCAGGAAATGAGAAGAAACTTGCGCACCTATGGAAGTTGGAAGGGGCAAAGGAGAGAC 180
Query 181 TGCGGCTGGTGAAGGCTGATTTAATGGAAGAAGGAAGTTTTGATAACGCCATTATGGGAT 240
| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 181 TACGGTTGGTGAAGGCTGATTTAATGGAAGAAGGAAGTTTTGATAACGCCATAATGGGAT 240
Query 241 GCCAAGGAGTTTTCCATACTGCTTCTCCTGTGCTCAAACCTACCTCTAATCCCGAGGAGG 300
|||||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||||
Sbjct 241 GCCAAGGAGTGTTCCATACTGCTTCTCCGGTGCTTAAACCTACCTCTAATCCAGAGGAGG 300
Query 301 AGATTTTGAGACCAGCTATAGAGGGAACCCTGAATGTACTGCGATCATGCGGGAAGAATC 360
||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct 301 AGATTCTGAGACCAGCTATAGAAGGAACCCTGAATGTACTGCGATCATGCAGGAAGAATC 360
Query 361 CGTCCCTGAAGCGCGTGGTTCTCACCTCATCATCTTCAACAGTCAGGATCAGAGATGATT 420
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 361 CTTCCCTGAAGCGCGTGGTTCTCACCTCATCCTCTTCAACAGTCAGGATCAGAGATGATT 420
Query 421 TTGATCCCAAAATCCCTCTTGACGAATCAATTTGGACCTCTGTGGAACTCTGCAAGCGTT 480
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 421 TTGATCCCAAAATCCCTCTTGACGAATCAATTTGGACGTCTGTGGAACTCTGCAAGCGCT 480
Query 481 TCCAGGTCTGGTATGCCTTATCAAAGACATTAGCGGAGCAAGCTGCATGGAAATTCTGTG 540
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct 481 TCCAGGTCTGGTATGCCTTATCAAAGACATTAGCGGAACAAGCTGCATGGAAATTCTCTG 540
Query 541 AAGAAGAGGGTATTGACCTCGTCACTGTTCTACCATCCTTCCTTGTTGGACCCAGTCTGC 600
||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 541 AAGAAAATGGTATTGACCTCGTCACTGTTCTACCATCCTTCCTCGTTGGACCCAGTCTGC 600
Query 601 CTCCTGATCTATGTTCTACAGCTTCGGATGTCCTCGGATTACTGAAAGGAGAAACAGAGA 660
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 601 CTCCTGATTTATGTTCTACAGCTTCCGATGTCCTCGGATTACTGAAAGGAGAAACAGAGA 660
Query 661 AGTTCCAATGGCATGGACAAATGGGGTATGTTCATATCGATGATGTTGCACGAACCCACA 720
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 661 AGTTCCAATGGCATGGACAAATGGGGTATGTTCATATCGATGACGTTGCACGAACCCACA 720
Query 721 TACTTGTTTTTGAACATGAAGCAGCGCAAGGCAGATACATTTGCAGCTCTAACGTTATCA 780
|| | ||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 721 TAGTCGTTTTCGAACACGAAGCAGCTCAAGGCAGATACATTTGTAGCTCTAACGTTATCA 780
Query 781 GTCTAGAGGAACTAGTTTCATTCCTATCTGCTCGTTACCCATCACTCCCTATCCCCAAGA 840
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 781 GTCTAGAGGAACTCGTTTCATTCCTATCTGCTCGTTACCCATCACTCCCTATCCCCAAGA 840
Query 841 GGTTTGAGAAACTAAATAGGTTGCATTACGACTTTGACACCTCGAAGATACAGAGTCTCG 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 GGTTTGAGAAACTAAATAGGTTGCATTACGACTTTGACACCTCGAAGATACAGAGTCTCG 900
Query 901 GGCTCAAGTTCAAGTCCCTTGAAGAGATGTTCGATGACTGCATTGCCTCATTAGTCGAGC 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 GGCTCAAGTTCAAGTCCCTTGAAGAGATGTTCGATGACTGCATTGCCTCATTAGTCGAGC 960
Query 961 AAGGCTATTTATCTACTGGTCTTCCATAACTCTTAGACTAGAGAATAGGTGCAAATAAGA 1020
|||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||
Sbjct 961 AAGGCTATTTATCTACTGTTCTTCCATAACTCTTGGACTAGAGAATATGTGCAAATAAGA 1020
Query 1021 TTGCTCTGAAATAGTAGACATTTGGATTCACATTTAAAGAATAGAATCGGATAACATGA 1079
||| ||||||||||||| ||| |||||||||| | ||||||| | || ||| |||||||
Sbjct 1021 TTGGTCTGAAATAGTAGTCATGTGGATTCACAATGAAAGAATGGGATTGGAAAACATGA 1079
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 54919396230
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5