BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491116
Length=2046
Score E
Sequences producing significant alignments: (Bits) Value
AT4G35310.1 | Symbols: CPK5, ATCPK5 | calmodulin-domain protein... 1589 0.0
AT2G17290.1 | Symbols: CPK6, ATCDPK3, ATCPK6 | Calcium-dependen... 896 0.0
AT4G38230.2 | Symbols: CPK26 | calcium-dependent protein kinase... 536 3e-151
AT3G20410.1 | Symbols: CPK9 | calmodulin-domain protein kinase ... 171 3e-41
> AT4G35310.1 | Symbols: CPK5, ATCPK5 | calmodulin-domain protein
kinase 5 | chr4:16801987-16804995 FORWARD LENGTH=2263
Length=2263
Score = 1589 bits (860), Expect = 0.0
Identities = 1000/1062 (94%), Gaps = 32/1062 (3%)
Strand=Plus/Plus
Query 1 CATTCTTTCAGTCTTCTCTCTCGGCCTTCTGAGTTCAACAGCTGTGTTATCTCTATGAAC 60
||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||
Sbjct 93 CATTCTTTCAGTCTTCTCTTTCGCCCTTCTGAGTTCAACAACTGTGTTATCTCTATGAAC 152
Query 61 AGTTCCTTGGATGAAGAACACAAACTGAAAGTTGCTGTCTTTA-AATCCAGGATTTGGTA 119
|||||||| ||||||||||||||| |||||||||||||||||| || ||||||||||||
Sbjct 153 AGTTCCTTTGATGAAGAACACAAAGTGAAAGTTGCTGTCTTTATAA-CCAGGATTTGGT- 210
Query 120 AATTCCCATTGTTTCATGGGCAATTCTTGCCGTGGATCTTTCAAGGACAAAATCTG-CGA 178
||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||
Sbjct 211 AATTCCCATTGTTTCATGGGCAATTCTTGCCGTGGATCTTTCAAGGACAAACTC-GACGA 269
Query 179 GGGCAATAACAATAACCCTGAAGATTACTCTAAAACCTCT-----C-A--T-TC--C-GA 226
||| |||||||||| |||||||||||||||||||||||| | | | || | |
Sbjct 270 AGGCGATAACAATAAGCCTGAAGATTACTCTAAAACCTCTACCACCAACTTGTCTTCTAA 329
Query 227 -T-C-A-C--TCCCCCAACGCTGCAGACATCATTGCTCAAGAATTCTCCAAAG------- 273
| | | | || || |||||||||||||||||||||||||||||||||||||
Sbjct 330 TTCCGACCATTCACCGAACGCTGCAGACATCATTGCTCAAGAATTCTCCAAAGACAACAA 389
Query 274 -A-CAACAACAACAGCAAAAATCCAGCTCTTGTTATTCCTTTAGGAGAACCAATCATGAG 331
| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 390 CAGCAACAACAACAGCAAAGATCCAGCTCTTGTTATTCCTTTAAGAGAACCAATCATGAG 449
Query 332 GCGTAACCCAGACAATCAAGCTTACTATGTTCTTGGTCATAAGACACCAAACATTCGTGA 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 450 GCGTAACCCAGACAATCAAGCTTACTATGTTCTTGGTCATAAGACACCAAACATTCGTGA 509
Query 392 TTTCTATACCCTTAGCCGTAAGCTAGGACAAGGTCAATTTGGAACGACTTATCTATGTAC 451
| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 510 TATCTATACCCTTAGCCGCAAGCTAGGTCAAGGTCAATTTGGAACGACTTATCTATGTAC 569
Query 452 AGAGATTGCCTCTGGCGTTGACTACGCTTGTAAGTCAATATCCAAGAGGAAGTTGATCTC 511
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 570 AGAGATTGCCTCAGGCGTTGACTACGCTTGTAAGTCAATATCCAAGAGGAAGTTGATCTC 629
Query 512 TAAAGAAGATGTTGAGGATGTTAGAAGGGAGATTCAGATAATGCATCATTTGGCTGGCCA 571
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 630 TAAAGAAGATGTTGAGGATGTTAGAAGGGAGATTCAGATAATGCATCATTTAGCTGGTCA 689
Query 572 CGGAAACATCGTGACGATTAAAGGAGCTTATGAGGACTCTTTGTATGTTCACATTGTTAT 631
||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 690 CGGTAGTATCGTGACGATTAAAGGAGCTTATGAGGACTCTTTGTATGTTCACATTGTTAT 749
Query 632 GGAGCTTTGTGCTGGAGGTGAATTGTTTGATAGGATTATTCAGAGAGGACATTATAGTGA 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 750 GGAGCTTTGTGCTGGAGGTGAATTGTTTGATAGGATTATTCAGAGAGGACATTATAGTGA 809
Query 692 GAGGAAAGCTGCTGAGCTGACTAAGATCATTGTCGGGGTTGTTGAAGCGTGTCATTCGCT 751
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 810 GAGGAAAGCTGCTGAGCTGACTAAGATCATTGTCGGTGTTGTTGAAGCGTGTCATTCGCT 869
Query 752 TGGTGTTATGCATAGAGACTTGAAGCCTGAGAATTTCTTGTTGGTTAATAAGGATGATGA 811
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 870 TGGTGTGATGCATAGAGACTTGAAGCCTGAGAATTTCTTATTGGTTAATAAGGATGATGA 929
Query 812 TTTCTCTCTCAAGGCTATTGATTTTGGCCTATCTGTCTTTTTCAAACCAGGTCAAATATT 871
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 930 TTTCTCTCTCAAGGCTATTGATTTTGGGCTATCTGTCTTTTTCAAACCAGGTCAAATATT 989
Query 872 CACTGATGTTGTTGGAAGTCCATATTATGTTGCTCCTGAGGTTTTGCTCAAACGTTATGG 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 990 CACTGATGTTGTTGGAAGTCCATATTATGTTGCTCCTGAGGTTTTGCTCAAACGTTATGG 1049
Query 932 GCCTGAAGCTGATGTGTGGACTGCTGGTGTTATACTGTATATATTGCTAAGTGGAGTCCC 991
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct 1050 GCCTGAAGCTGATGTGTGGACTGCTGGTGTTATATTGTATATATTGCTAAGCGGAGTCCC 1109
Query 992 GCCTTTCTGGGCAGAAACACAGCAAGGGATATTTGATGCTGT 1033
|||||||||||||||||||||||||||||||||||||||||
Sbjct 1110 ACCTTTCTGGGCAGAAACACAGCAAGGGATATTTGATGCTGT 1151
Score = 1375 bits (744), Expect = 0.0
Identities = 905/978 (93%), Gaps = 29/978 (3%)
Strand=Plus/Plus
Query 1090 GTCATCCATGGATCTGTGAGAATGGTGTTGCACCAGATAGAGCACTTGATCCAGCTGTTC 1149
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1277 GTCATCCATGGATCTGTGAGAATGGTGTTGCACCAGATAGAGCACTAGATCCAGCTGTTC 1336
Query 1150 TGTCTCGTCTCAAGCAGTTCTCTGCAATGAATAAACTAAAGAAGATGGCTTTGAAGGTTA 1209
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1337 TTTCTCGTCTCAAGCAATTCTCTGCAATGAATAAACTAAAGAAGATGGCTTTGAAGGTTA 1396
Query 1210 TAGCTGAGAGCCTCTCGGAAGAAGAGATTGCTGGCTTAAGAGAAATGTTTCAGGCAATGG 1269
|||||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||||
Sbjct 1397 TAGCTGAGAGTCTCTCGGAAGAAGAGATAGCTGGTTTAAGAGAAATGTTTCAAGCAATGG 1456
Query 1270 ATACTGATAACAGCGGTGCAATAACATTTGATGAACTCAAAGCTGGGCTGAGAAAATATG 1329
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1457 ATACTGATAACAGCGGGGCAATCACATTTGATGAACTCAAAGCTGGGCTGAGAAAATATG 1516
Query 1330 GATCTACCTTAAAAGACACAGAGATTCATGATCTAATGGAAGCGGCTGATGTGGACAACA 1389
|||||||||| |||||||||||||| |||||||| ||||| ||||||||||| |||||||
Sbjct 1517 GATCTACCTTGAAAGACACAGAGATCCATGATCTTATGGATGCGGCTGATGTAGACAACA 1576
Query 1390 GTGGGACAATAGATTACAGTGAATTCATTGCAGCGACGATTCATCTCAACAAACTGGAGC 1449
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||
Sbjct 1577 GTGGGACAATAGATTACAGTGAGTTCATTGCAGCGACGATCCATCTCAACAAACTAGAGC 1636
Query 1450 GGGAAGAGCATCTTGTCGCAGCGTTTCAATACTTTGACAAAGACGGAAGCGGTTTCATAA 1509
|||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 1637 GGGAAGAGCATCTTGTTGCAGCGTTTCAATATTTTGACAAAGATGGAAGCGGTTTCATAA 1696
Query 1510 CAATCGATGAGCTGCAACAAGCGTGTGTTGAACATGGCATGGCTGATGTTTTCCTTGAAG 1569
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1697 CAATTGATGAGCTACAACAAGCGTGTGTTGAACATGGCATGGCTGATGTTTTCCTTGAAG 1756
Query 1570 ATATCATCAAAGAAGTTGATCAAAACAATGATGGAAAGATTGATTATGGTGAGTTTGTGG 1629
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1757 ACATCATCAAAGAAGTTGATCAAAACAATGATGGAAAGATTGATTATGGTGAGTTTGTGG 1816
Query 1630 AGATGATGCAAAAGGGAAATGCTGGTGTTGGAAGAAGAACGATGAGAAATAGTCTAAACA 1689
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1817 AGATGATGCAAAAGGGAAATGCTGGTGTTGGAAGAAGGACGATGAGAAATAGTCTAAACA 1876
Query 1690 TTAGCATGAGAGACGCGTAGAGGTTGTTTTCCCCGGTGTTTAATTTGCTT-GTGCGATTG 1748
|||||||||||||||||||||||||||||||||||||||||||| || || ||||||| |
Sbjct 1877 TTAGCATGAGAGACGCGTAGAGGTTGTTTTCCCCGGTGTTTAATATG-TTAGTGCGATCG 1935
Query 1749 TGACTGCAAAAATGTTCTTTATTCATGGAATC--CA-CC--A---C--A-----TAGAAG 1793
||||||| ||||||||||| |||||||||||| || || | | | ||||||
Sbjct 1936 TGACTGCGAAAATGTTCTT-ATTCATGGAATCAACAACCTCAATGCTCACCACCTAGAAG 1994
Query 1794 GAGAAGAAAGAAGACCAAACCAGATTCATAGCTGTGGATGGTTCGAGCTAATGTTTAACG 1853
| || |||||||||||||||| |||||||| |||||||||||||||| | |||||||||
Sbjct 1995 GCGATGAAAGAAGACCAAACCGGATTCATACCTGTGGATGGTTCGAGTTT-TGTTTAACG 2053
Query 1854 ACTGTGTGATTAATCGTCGAGTAGGTTTGGAGGTTTTTTCTTTTACCTCTGTGTTGTTTG 1913
|||||||||||||||||| ||||| |||||||||||||||||| |||||| |||||||||
Sbjct 2054 ACTGTGTGATTAATCGTCAAGTAGTTTTGGAGGTTTTTTCTTT-ACCTCTTTGTTGTTTG 2112
Query 1914 TTTGTTATGGCCATTGTTGAAGTTAGTGAGCTTTGTTCATTATCTGCCATTGTTAAAACT 1973
|| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct 2113 TTCATTATGGCCATTGTTGAAGTTAGTGAGCTTTGTTCATCATCTGCCATTGTTAAA-CT 2171
Query 1974 TTGTTCACTCTTGTATTTGaaaaaaaCAAAGTGTGTCTTTGTATGCTATGT-----CTAA 2028
||||||||| | |||||||||||||||||| |||||||||||| | ||| ||||
Sbjct 2172 TTGTTCACT-T-GTATTTGAAAAAAACAAAAA-TGTCTTTGTATGTTGTGTGATTTCTAA 2228
Query 2029 GCATTTTTATTTTGAAAA 2046
||||||||| ||||||||
Sbjct 2229 GCATTTTTACTTTGAAAA 2246
> AT2G17290.1 | Symbols: CPK6, ATCDPK3, ATCPK6 | Calcium-dependent
protein kinase family protein | chr2:7516415-7519633 FORWARD
LENGTH=2332
Length=2332
Score = 896 bits (485), Expect = 0.0
Identities = 664/750 (89%), Gaps = 14/750 (2%)
Strand=Plus/Plus
Query 291 AATCCAGCTCTTGTTATTCCT-TTAGGAGAACCAATCATGAGGCGTAACCCAGACAATCA 349
|||||||||||||| |||||| ||| |||||| || ||| |||||||| ||||||||
Sbjct 451 AATCCAGCTCTTGTGATTCCTGTTA-AAGAACCCATTATGCGGCGTAACGTTGACAATCA 509
Query 350 AGCTTACTATGTTCTTGGTCATAAGACACCAAACATTCGTGATTTCTATAC-CCTT-AGC 407
| ||||||||||||||||||| ||||| || ||||||||||| ||| ||| | || ||
Sbjct 510 ATCTTACTATGTTCTTGGTCACAAGACTCCTAACATTCGTGA--TCTTTACACGTTGAGT 567
Query 408 CGTAAGCTAGGACAAGGTCAATTTGGAACGACTTATCTATGTACAGAGATTGCCTCTGGC 467
|||||| |||||||||| ||||| || || || ||| | ||||| || |||||| | ||
Sbjct 568 CGTAAGTTAGGACAAGGACAATTCGGGACAACGTATTTGTGTACTGATATTGCCACAGGT 627
Query 468 GTTGACTACGCTTGTAAGTCAATATCCAAGAGGAAGTTGATCTCTAAAGAAGATGTTGAG 527
|||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct 628 GTTGACTATGCTTGTAAGTCTATATCCAAGAGGAAATTGATATCTAAAGAAGATGTTGAG 687
Query 528 GATGTTAGAAGGGAGATTCAGATAATGCATCATTTGGCTGGCCACGGA-AACATCGTGAC 586
|||||||| |||||||||||||| ||||||||||| ||||| ||| | || || || ||
Sbjct 688 GATGTTAGGAGGGAGATTCAGATTATGCATCATTTAGCTGGTCAC-AAGAATATTGTTAC 746
Query 587 GATTAAAGGAGCTTATGAGGACT-CTTTGTATGTTCACATTGTTATGGAGCTTTGTGCTG 645
|||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||
Sbjct 747 TATTAAAGGAGCTTATGAGGA-TCCTTTGTATGTTCACATTGTGATGGAGCTTTGTGCTG 805
Query 646 GAGGTGAATTGTTTGATAGGATTATTCAGAGAGGACATTATAGTGAGAGGAAAGCTGCTG 705
| ||||| |||||||||||||||||||| ||||| ||||| || ||||||||||||||||
Sbjct 806 GTGGTGAGTTGTTTGATAGGATTATTCATAGAGGTCATTACAGCGAGAGGAAAGCTGCTG 865
Query 706 AGCTGACTAAGATCATTGTCGGGGTTGTTGAAGCGTGTCATTCGCTTGGTGTTATGCATA 765
|| |||| |||||||||||||| |||||||| ||||||||||| ||||||||||||||||
Sbjct 866 AGTTGACCAAGATCATTGTCGGTGTTGTTGAGGCGTGTCATTCTCTTGGTGTTATGCATA 925
Query 766 GAGACTTGAAGCCTGAGAATTTCTTGTTGGTTAATAAGGATGATGATTTCTCTCTCAAGG 825
|||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 926 GAGATTTAAAGCCTGAGAATTTCTTGTTGGTTAATAAGGATGATGATTTCTCTCTTAAGG 985
Query 826 CTATTGATTTTGGCCTATCTGTCTTT-TTCAAACCAGGTCAAATATTCACTGATGTTGTT 884
| ||||||||||| || ||||| ||| ||||||||||| |||||||||| |||||||||
Sbjct 986 CCATTGATTTTGGTCTCTCTGT-TTTCTTCAAACCAGGCCAAATATTCAAGGATGTTGTT 1044
Query 885 GGAAGTCCATATTATGTTGCTCCTGAGGTT-TTGCTCAAACGTTATGGGCCTGAAGCTGA 943
||||||||||| |||||||||||||||||| || || |||| |||||| || ||||||||
Sbjct 1045 GGAAGTCCATACTATGTTGCTCCTGAGGTTCTT-CTAAAACATTATGGTCCAGAAGCTGA 1103
Query 944 TGTGTGGACTGCTGGTGTTATACTGTATATATTGCTAAGTGGAGTCCCGCCTTTCTGGGC 1003
|||||||||||||||||||||||| ||||| || |||||||| |||||||||||||||||
Sbjct 1104 TGTGTGGACTGCTGGTGTTATACTCTATATCTTACTAAGTGGTGTCCCGCCTTTCTGGGC 1163
Query 1004 AGAAACACAGCAAGGGATATTTGATGCTGT 1033
||||||||||||||| ||||||||||||||
Sbjct 1164 AGAAACACAGCAAGGAATATTTGATGCTGT 1193
Score = 719 bits (389), Expect = 0.0
Identities = 545/622 (88%), Gaps = 4/622 (1%)
Strand=Plus/Plus
Query 1090 GTCATCCATGGATCTGTGAGAATGGTGTTGCACCAGATAGAGCACTTGATCCAGCTGTTC 1149
||||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||
Sbjct 1319 GTCATCCATGGATCTGTGAGAATGGAGTTGCACCGGATAGAGCACTTGACCCGGCTGTTT 1378
Query 1150 TGTCTCGTCTCAAGCAGTTCTCTGCAATGAATAAACTAAAGAAGATGGCTTTGAAGGTTA 1209
|||||||||| || ||||| ||||||||||||||| |||||||||||||||| ||||| |
Sbjct 1379 TGTCTCGTCTAAAACAGTTTTCTGCAATGAATAAATTAAAGAAGATGGCTTTAAAGGTGA 1438
Query 1210 TAGCTGAGAGCCTCTCGGAAGAAGAGATTGCTGGCTTAAGAGAAATGTTTCAGGCAATGG 1269
|||||||||||||||| |||||||||||||| || ||||||| ||||||| |||||||||
Sbjct 1439 TAGCTGAGAGCCTCTCAGAAGAAGAGATTGCGGGTTTAAGAGCAATGTTTGAGGCAATGG 1498
Query 1270 ATACTGATAACAGCGGTGCAATAACATTTGATGAACTCAAAGCTGGGCT-GAGAAAATAT 1328
|||||||||||||||||||||| || |||||||||||||||||||| || ||||| ||||
Sbjct 1499 ATACTGATAACAGCGGTGCAATCACTTTTGATGAACTCAAAGCTGG-CTTGAGAAGATAT 1557
Query 1329 GGATCTACCTTAAAAGACACAGAGATTC-ATGATCTAATGGAAGCGGCTGATGTGGACAA 1387
||||| ||||| |||||||| ||||| | | ||||| |||||||||||||||||||||||
Sbjct 1558 GGATCAACCTTGAAAGACACCGAGATCCGA-GATCTTATGGAAGCGGCTGATGTGGACAA 1616
Query 1388 CAGTGGGACAATAGATTACAGTGAATTCATTGCAGCGACGATTCATCTCAACAAACTGGA 1447
||| || |||||||||||||| || || |||||||||||||| ||||| || ||||| ||
Sbjct 1617 CAGCGGTACAATAGATTACAGCGAGTTTATTGCAGCGACGATCCATCTGAATAAACTAGA 1676
Query 1448 GCGGGAAGAGCATCTTGTCGCAGCGTTTCAATACTTTGACAAAGACGGAAGCGGTTTCAT 1507
| | ||||||||||||||| | || ||||| |||||||||||||| ||||| |||| |||
Sbjct 1677 GAGAGAAGAGCATCTTGTCTCTGCATTTCAGTACTTTGACAAAGATGGAAGTGGTTACAT 1736
Query 1508 AACAATCGATGAGCTGCAACAAGCGTGTGTTGAACATGGCATGGCTGATGTTTTCCTTGA 1567
|| || ||||||||||||||| | || |||||||||| ||| | |||||||| |||||
Sbjct 1737 CACCATTGATGAGCTGCAACAATCTTGCATTGAACATGGGATGACCGATGTTTTTCTTGA 1796
Query 1568 AGATATCATCAAAGAAGTTGATCAAAACAATGATGGAAAGATTGATTATGGTGAGTTTGT 1627
||| || ||||||||||| |||||| |||| |||||| ||||||||| | || |||||
Sbjct 1797 AGACATAATCAAAGAAGTAGATCAAGACAACGATGGACGGATTGATTACGAAGAATTTGT 1856
Query 1628 GGAGATGATGCAAAAGGGAAATGCTGGTGTTGGAAGAAGAACGATGAGAAATAGTCTAAA 1687
| ||||||||||||||||||||||||||| || |||||||| |||| ||||||||||||
Sbjct 1857 TGCGATGATGCAAAAGGGAAATGCTGGTGTAGGGAGAAGAACAATGAAAAATAGTCTAAA 1916
Query 1688 CATTAGCATGAGAGACGCGTAG 1709
||| ||||||||||| | ||||
Sbjct 1917 CATCAGCATGAGAGATGTGTAG 1938
> AT4G38230.2 | Symbols: CPK26 | calcium-dependent protein kinase
26 | chr4:17928817-17931371 REVERSE LENGTH=1815
Length=1815
Score = 536 bits (290), Expect = 3e-151
Identities = 567/698 (81%), Gaps = 30/698 (4%)
Strand=Plus/Plus
Query 348 CAAGCTTACTATGTTCTTGGTCATAAGACACCAAACATTCGTGATTTCTATAC-CCTT-A 405
||||| | ||||||||||||||| ||||| |||| ||| || || ||| ||| | ||
Sbjct 291 CAAGCCTGCTATGTTCTTGGTCAAAAGACCCCAAGCATCCGAGA--TCTCTACTCGTTGG 348
Query 406 GCCGTAAGCTAGGACAAGGTCAATTTGGAACGACTTATCTATGT--ACAGAGAT-TGCCT 462
| | || ||||| ||||| || ||||| |||||||| | |||| | |||||| | |
Sbjct 349 GACACAAACTAGGTCAAGGACAGTTTGGGACGACTTA-C-ATGTGCAAAGAGATCT-CAA 405
Query 463 C-TGGCGTTGACTACGCTTGTAAGTCAATATCCAAGA-GGAAGTTGATCTCTAAA-GAAG 519
| |||| ||| ||||| || ||||| ||| ||| | | |||||||| || ||| ||||
Sbjct 406 CAGGGCG-TGAATACGCATGCAAGTCTATA-ACAAAACGAAAGTTGATATC-AAAGGAAG 462
Query 520 ATGTTGAGGATGTTA-GAAGGGAGATTCAGATAATGCATCATTTGGCTGGCCACGGA-AA 577
|||| || || | || | ||||| ||||| || ||||| ||| |||||||| || | ||
Sbjct 463 ATGTGGAAGACG-TACGCAGGGAAATTCAAATCATGCACCATCTGGCTGGCTAC-AAGAA 520
Query 578 CATCGTGACGATTAAAGGAGCTTATGAGGACT-CTTTGTATGTTCACATTGTTATGGAGC 636
||| || || |||||||| ||||| ||||| | | |||||||||||||| || |||||||
Sbjct 521 CATTGTCACCATTAAAGGTGCTTACGAGGA-TCCATTGTATGTTCACATCGTGATGGAGC 579
Query 637 TTTG-TGCTGGAGGTGAATTGTTTGATAGGATTATTCAGAGAGGACATTATAGTGAGAGG 695
|||| | | || || ||||||||||| || ||||| |||||||||||||| || |||||
Sbjct 580 TTTGCT-CAGGTGGGGAATTGTTTGACAGAATTATCCAGAGAGGACATTACAGCGAGAGA 638
Query 696 AAAGCTGCTGAGCTGACT-AAGATCATTGTCGGGGTTGTTGAAGCGTGTCATTCGCTTGG 754
||||| |||||||||| | |||||||| || || |||||||| || || |||||||||||
Sbjct 639 AAAGCAGCTGAGCTGA-TAAAGATCATCGTTGGTGTTGTTGAGGCTTGCCATTCGCTTGG 697
Query 755 TGTTATGCATAGAGACT-TGAAGCCTGAGAATTTCTTGTTGGTTAATAAGGATGATGATT 813
||| ||||||||||| | | ||||| || ||||||||||||||||| ||||| || || |
Sbjct 698 TGTCATGCATAGAGA-TCTAAAGCCCGAAAATTTCTTGTTGGTTAACAAGGACGACGACT 756
Query 814 TCTCTCTCAAGGCTATTGATTTTGGCCTATCTGTCTTTTTCAAACCAGGTCAAATATTC- 872
|||||||||| || ||||||||||| || || || || |||||||||||||||||||||
Sbjct 757 TCTCTCTCAAAGCCATTGATTTTGGGCTTTCCGTGTTCTTCAAACCAGGTCAAATATTCG 816
Query 873 ACTGATGTTGTTGGAAGTCCATATTATGTTGCTCCTGAGGTTTTGCTCAAACGTTATGGG 932
| ||||| ||||||||||| ||||||||||||||||||||| ||||||| | || ||
Sbjct 817 A-GGATGTGGTTGGAAGTCCGTATTATGTTGCTCCTGAGGTTCTGCTCAAGCACTACGGA 875
Query 933 CCTGAAGCTGATGTGTGGACTGCTGGTGTTATACTGTATATATTGCTAAGTGGAGTCCCG 992
|| || |||||||||||||| || || || |||||||| |||||| | || ||||||||
Sbjct 876 CCCGAGGCTGATGTGTGGACCGCAGGGGTCATACTGTACATATTGGTGAGCGGAGTCCCT 935
Query 993 CCTTTCTGGGCAGAAACACAGCAAGGGATATTTGATGC 1030
|| |||||||||||||||||||||||||||||||||||
Sbjct 936 CCGTTCTGGGCAGAAACACAGCAAGGGATATTTGATGC 973
> AT3G20410.1 | Symbols: CPK9 | calmodulin-domain protein kinase
9 | chr3:7116201-7119121 FORWARD LENGTH=2110
Length=2110
Score = 171 bits (92), Expect = 3e-41
Identities = 474/650 (73%), Gaps = 60/650 (9%)
Strand=Plus/Plus
Query 412 AGCTAGGACAAGGTCAATTTGGAACGACTTATCTATGTACAGAG-ATTGCCTCTGGCGTT 470
||||||| | ||||||||||| || ||||| || |||||| ||| || | || |
Sbjct 474 AGCTAGGTCGTGGTCAATTTGGGGTAACGTATCTGTGCACAGAGAATT-CCAC-GGGGAA 531
Query 471 G-ACTACGCTTGTAAGTCAATATCCAAGAGGAAGTTGATCTCTAAAGAAGATGTTGAGGA 529
| | |||||||| || || || || |||| |||| || | |||||| ||| || ||
Sbjct 532 GAAGTACGCTTGCAAATCGATCTCGAAGAAGAAGCTGGTGACTAAAGCTGATAAGGATGA 591
Query 530 TGTTAGAAGGGAGATTCAGATAATGCATCATTTG-GCTGGCCACG-GAAACATCGT-GAC 586
| | || || ||||||||||||||||| |||||| | ||| || | || || || ||
Sbjct 592 TATGAGGAGAGAGATTCAGATAATGCAGCATTTGAG-TGGGCA-GCCTAATATTGTGGA- 648
Query 587 GATTAAAGGAGCTTATGAGGACTCTTTGTATG-T-TCACA-TT-GTTATGGAGCTTTGTG 642
| ||||||||||||||||||| | | | | | | | | || || |||||||||||||
Sbjct 649 GTTTAAAGGAGCTTATGAGGA---TGAGAAAGCTGTGA-ATTTGGTGATGGAGCTTTGTG 704
Query 643 CTGGAGGTGAATTGTTTGATAGGATTATT-C-AGAGAGGACATTATAGTGAGAGGAAAGC 700
|||| ||||||||||||||||| || ||| | | || |||||||| | ||||| | |||
Sbjct 705 CTGGTGGTGAATTGTTTGATAGAATCATTGCTA-AG-GGACATTACACTGAGA-G--AGC 759
Query 701 TGCTG-AGCTGACT-AAGATC--ATTGTCG-GGGTTGTTGAAG-CGTGTCA-TTCGCTTG 753
||||| ||| | ||| | ||||| | |||| | ||| ||||| ||| | |
Sbjct 760 TGCTGCTTCTGTTTGTAGA-CAGATTGT-GAATGTTG-TCAAGATTTGTCATTTC-ATGG 815
Query 754 GTGT-TATGCATAGAGACTTGAAGCCTGAGAATTTCTTGTTGGT-TAATAAGGATGATGA 811
|||| | |||||||||||||||||||||||||||||||| | | || || ||||| ||
Sbjct 816 GTGTGT-TGCATAGAGACTTGAAGCCTGAGAATTTCTTGCTC-TCTAGCAAAGATGA-GA 872
Query 812 TTTCTCTC-TCAAGGCTATTGATTTTGGCCTATCTGTCTTT-TTCAAACCAGGTCAAA-T 868
|| | ||||||||| |||||| || | ||||||||| || || ||| ||| |
Sbjct 873 AGGCTTTGATCAAGGCTACTGATTTCGGATTGTCTGTCTTTATTGAAG--AGGGAAAAGT 930
Query 869 AT-TCACTGATGTTGTTGGAAGTCCATATTATGTTGCTCCTGAGGTTTTGC-TCAAACGT 926
|| | | ||| ||||||| ||| |||| ||||||||||| || || || | || | |
Sbjct 931 ATAT-AGAGATATTGTTGGGAGTGCATACTATGTTGCTCCAGAAGTCTTACGTCGCA-GA 988
Query 927 TATGGGCCTGAAGCTGATGTGTGGACTGCTGGTGTTATACTGTATATATTGCTA---AGT 983
|||||| |||| |||| | |||| |||||| | || || |||| ||| ||| ||
Sbjct 989 TATGGGAAAGAAGTTGATATCTGGAGTGCTGGAATCAT-CT-TATACATT-CTACTCAGC 1045
Query 984 GGAGT-CCCGCC-TTTCTGGGCAGAAACACAGCAAGGGATATTTGATGCT 1031
|| || ||| || ||| ||||| || || || |||| ||||||||||||
Sbjct 1046 GGTGTGCCC-CCGTTT-TGGGCTGAGACTGAGAAAGGAATATTTGATGCT 1093
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 101405100900
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5