BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491122
Length=3255
Score E
Sequences producing significant alignments: (Bits) Value
AT4G35270.1 | Symbols: | Plant regulator RWP-RK family protein... 3594 0.0
AT2G17150.1 | Symbols: | Plant regulator RWP-RK family protein... 826 0.0
> AT4G35270.1 | Symbols: | Plant regulator RWP-RK family protein
| chr4:16777338-16780824 REVERSE LENGTH=3211
Length=3211
Score = 3594 bits (1946), Expect = 0.0
Identities = 2112/2190 (96%), Gaps = 19/2190 (1%)
Strand=Plus/Plus
Query 1070 TCTGCAGATTATATGACCTGCCTCTGGCTTTAACGTGGGCACCGTGTGCTCGGCAAGGCA 1129
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TCTGCAGAGTATATGACCTGCCTCTGGCTTTAACGTGGGCACCGTGTGCTCGGCAAGGCA 1096
Query 1130 AAGTTGGATCCCGCCATTCTGATGAGAACTTCGCTGAGTGTGTTTCAACTGTTGATGATG 1189
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1097 AAGTTGGATCCCGCCATTCTGATGAGAACTTCTCTGAGTGTGTTTCAACTGTTGATGATG 1156
Query 1190 CTTGCATTGTCCCTGATCATCAGAGTCGTCATTTCCTAGAGGCATGTTCTGAACACCATC 1249
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1157 CTTGCATTGTCCCTGACCATCAGAGTCGTCATTTTCTAGAGGCATGTTCTGAACACCATC 1216
Query 1250 TGCTTCAAGGGGAAGGCATTGTGGGAAAAGCATTCAAAGCAACCAAACTGTTTTTCGTGC 1309
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 1217 TGCTTCAAGGGGAAGGCATTGTAGGAAAAGCATTCAACGCAACCAAACTGTTTTTCGTGC 1276
Query 1310 CCGAAGTAACCACTTTTAGCAAGACCAACTACCCTCTTGCACACCATGCTAAGATCTCAG 1369
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1277 CCGAAGTAACCACTTTTAGCAAGACCAACTACCCTCTTGCACACCATGCTAAGATCTCTG 1336
Query 1370 GTCTACATGCTGCTCTAGCAGTCCCGTTGAAAAACAAATTCAATAGTTCGGTTGAGTTTG 1429
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1337 GTCTACATGCTGCTTTAGCAGTCCCATTGAAAAACAAATTCAATAGTTCGGTTGAGTTTG 1396
Query 1430 TGTTCGAGTTTTTCTTTCCAAAAGCTTGCCTTGACACCGAAGCGCAACAAGAAATGCTCA 1489
|||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 1397 TGTTGGAGTTTTTCTTTCCAAAAGCTTGCCTTGACACCGAAGCACAACAAGATATGCTCA 1456
Query 1490 AGTCACTGTCTGCGACCCTTCAGCAGGATTTCAGGAGCTTAAATCTTTTCATTGATAAAG 1549
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1457 AGTCTCTGTCTGCGACCCTTCAGCAGGATTTCAGGAGCTTAAATCTTTTCATTGATAAAG 1516
Query 1550 AGCTTGAGCTAGAAGTTGTATTTCCCGTTAGAGAGGAAGTAGTTTTTGCAGAGAACCCAC 1609
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1517 AGCTTGAGCTAGAAGTTGTATTTCCCGTTAGAGAGGAAGTTGTTTTTGCAGAGAACCCAC 1576
Query 1610 TTCTTAACGCAGGAACCGGAGAGAATATGAAACCTTTGCCTTTGGAAGATATGTCTCAGG 1669
|| | |||||||||||||||||| |||||||||| |||||||||||||| || |||||||
Sbjct 1577 TTATCAACGCAGGAACCGGAGAGGATATGAAACCATTGCCTTTGGAAGAAATTTCTCAGG 1636
Query 1670 AAGATTCTTCATGGATCTCACACATGATAAAGGCAAATGAGAAAGGTAAAGGCGTGTCAC 1729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1637 AAGATTCTTCATGGATCTCACACATGATAAAGGCAAATGAGAAAGGTAAAGGCGTGTCAC 1696
Query 1730 TTTCTTGGGAGTATCAAAAAGAAGAGCCAAAAGAAGAGTTTATGCTTACATCTGGATGGG 1789
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1697 TTTCTTGGGAGTACCAAAAAGAAGAGCCAAAAGAAGAGTTTATGCTTACATCTGGATGGG 1756
Query 1790 ATAACAATCAGATTGGTTCTGGTCACAATAACTTTCTTTCAGAAGCTGAGCAGTTTCAGA 1849
|||||||||||||||| || || ||||||||||||||||||||||||||||||||||| |
Sbjct 1757 ATAACAATCAGATTGGATCAGGCCACAATAACTTTCTTTCAGAAGCTGAGCAGTTTCAAA 1816
Query 1850 AGGTGTCAAATTCAGGACTCAGAATCGACATGGTTCCAAGTTTTGAATCAGCTTCCTTTG 1909
||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1817 AGGTGACAAATTCAGGACTCAGAATCGACATGGATCCAAGTTTTGAATCAGCTTCCTTTG 1876
Query 1910 GTGTTGTGGGGCAGACATTACTAGGCAGTAGAAGACCAGGTGAGAAGAGAAGAACAAAAA 1969
||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1877 GTG-T-T-GGGCAGACATTACTAGGCAGTAGAAGACCAGGTGAGAAGAGAAGAACAAAAA 1933
Query 1970 CAGAAAAGACAATTGGTTTAGAAGTTCTTCGACAATACTTTGCAGGAAGCCTCAAAGATG 2029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1934 CAGAAAAGACAATTGGTTTAGAAGTTCTTCGACAATACTTTGCAGGAAGCCTCAAAGATG 1993
Query 2030 CAGCTAAGAGCATTGGTGTTTGTCCAACTACCTTGAAAAGAATATGCAGACAACACGGGA 2089
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1994 CAGCCAAGAGCATTGGTGTTTGTCCAACTACCTTGAAAAGAATATGCAGACAACACGGGA 2053
Query 2090 TAACACGGTGGCCTTCTCGGAAGATCAAGAAAGTGGGGCATTCATTAAAGAAACTCCAAC 2149
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2054 TAACACGATGGCCTTCCCGGAAGATCAAGAAAGTGGGGCATTCATTAAAGAAACTCCAAC 2113
Query 2150 TTGTTATAGACTCTGTTCAAGGTGTTCAAGGCTCTATTCAACTTGATTCATTCTATACAA 2209
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2114 TTGTTATAGACTCTGTTCAAGGTGTTCAAGGTTCTATTCAACTTGATTCATTCTATACAA 2173
Query 2210 GTTTCCCAGAATTAAGCTCCCCACATATGTCTGGTACTGGCACTTCCTTCAAGAATCTAA 2269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2174 GTTTCCCAGAATTAAGCTCCCCACATATGTCTGGTACTGGCACTTCCTTCAAGAATCCAA 2233
Query 2270 ATGCTCAAACCGAGAACGGTGGTTCGGCACAGGGAACTGCTGCAGCTCCAAAGTCACCAC 2329
|||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 2234 ATGCTCAAACGGAGAACGGTGTTTCAGCACAGGGAACTGCTGCAGCTCCAAAGTCACCAC 2293
Query 2330 CATCATCTTCTTGTAGCCACAGCTCTGGTTCAAGCACCTGTTGTTCAACTGGAGCTAATC 2389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2294 CATCATCTTCTTGTAGCCACAGCTCTGGTTCAAGCACCTGTTGTTCAACTGGAGCTAATC 2353
Query 2390 AAAGCACCAACACCGGAAATACCTCAAATACTGTAACCACTTTGATGGCTGAAAATGCTA 2449
|||| ||||| || || | |||||||||||||||||||||| ||||||||||||||||||
Sbjct 2354 AAAGTACCAATACTGGGACTACCTCAAATACTGTAACCACTCTGATGGCTGAAAATGCTA 2413
Query 2450 GCGCGATCTTGAAGAGAGCTCGTAGCGAGGTGAGACTGCATACCATGAATCAGGATGAAA 2509
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 2414 GCGCGATCTTGAAGAGAGCTCGTAGCGAAGTGAGACTTCATACCATGAATCAGGATGAAA 2473
Query 2510 CAAAGTCCCTGTCTAGAACCCTGAGCCACAAAACATTCAGTGAACATCCTCTTTTCGAAA 2569
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2474 CAAAGTCCCTCTCTAGAACCCTGAGCCACAAAACATTCAGTGAGCATCCTCTTTTCGAAA 2533
Query 2570 ATCCACCTCGGTTACCGGAGAGTAGTAGCAGGAAGTTGAAAGCTGGAGGGGCCTCAAAAG 2629
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2534 ATCCACCTCGGTTACCGGAGAATAGTAGCAGGAAGTTGAAAGCTGGAGGGGCCTCAAAAG 2593
Query 2630 TGAAAGCCACATTTGGTGAGGCCAAAGTACGGTTTACTTTGCTCCCTACATGGGGCTTCA 2689
||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||
Sbjct 2594 TGAAAGCCACATTTGGTGAAGCCAAAGTACGGTTTACTTTGCTTCCTACTTGGGGCTTCA 2653
Query 2690 GAGAGTTGCAGCATGAGATTGCTAGGCGTTTTAACATAGATAATATTGCACCCTTTGATC 2749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2654 GAGAGTTGCAGCATGAGATTGCTAGGCGTTTTAACATAGATAATATTGCACCCTTTGATC 2713
Query 2750 TTAAGTACCTGGATGATGACAAGGAATGGGTTCTTCTGACATGTGAAGCGGATCTCGAGG 2809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2714 TTAAGTACCTGGATGATGACAAGGAATGGGTTCTTCTGACATGTGAAGCGGATCTCGAGG 2773
Query 2810 AATGTATCGACATTTATAGATCATCACAGAGCCGCACGATCAAGATAAGCGTTCATGAAG 2869
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2774 AATGTATCGACATTTATAGATCATCACAGAGCCGCACGATCAAGATAAGTGTTCATGAAG 2833
Query 2870 CTTCTCAAGTCAAGCTAGGAGGTTCTTTTGGTAGCATCGGTCTTGGTCCTTCGTTATAAG 2929
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2834 CTTCTCAAGTCAAGCTGGGAGGTTCTTTTGGTAGCATCGGTCTTGGTCCCTCGTTATAAG 2893
Query 2930 CAATCAGGTAAGTAACAAGGTTGT-ACCTGCAAGAAGA-AAAAGAAAAGAGCAGGAGATT 2987
| |||||||| ||| |||||| ||||||||||| | |||||||||||||||||||||
Sbjct 2894 CTATCAGGTA--TAA---GGTTGTTACCTGCAAGAAAAGAAAAGAAAAGAGCAGGAGATT 2948
Query 2988 CGACTAATTTACTAGTGTGTTAGAAAAATATTACTTACCATTTGATAGCAATAGGGCATC 3047
||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||
Sbjct 2949 CGACTAATTTACTAGTGTGTTAGAAAAATATTACTCACCATTTTATAGCAAT-GGGCATC 3007
Query 3048 TCGTTTGTACACATATTTTCAGTGCCCCCATTTTGCAAGCAGCAAGTAGTGGACTGGTTT 3107
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 3008 --GTTTGTAAACATATTTTCAGTGCCCCCATTTTGCAAGCAGCA-GTAGTGGACTGGTTT 3064
Query 3108 CCTGCATCGGCTTAGCAGATTTTTTGTATAATAAGGCGATGCGTATACCAGA-AA-CATG 3165
||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||
Sbjct 3065 CCTGCATCGGCTTAGCAGATTTTTTGTATAATAAGGCGATGCGTA--CCAGAGAAACATG 3122
Query 3166 CTTATATGTATGTATTTTTATTGTCTGTACATCATTTTGTCATCTGGATTCTACTAAGCT 3225
|||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||
Sbjct 3123 CTTATATGTATGTATTATTATTGTCTGTACATCATTT-GTCTTCTGGATTCTACTAAGCT 3181
Query 3226 CTGCAAGTATGTTAAATTGATATATCTTCT 3255
||||||||||||||||||||||||||||||
Sbjct 3182 CTGCAAGTATGTTAAATTGATATATCTTCT 3211
Score = 1557 bits (843), Expect = 0.0
Identities = 927/969 (96%), Gaps = 0/969 (0%)
Strand=Plus/Plus
Query 1 ATGGAAGGTGGTCGTGGTGGTGGAGATGGCAATTTCTTACCCAACTCTAACTTTGGTGCA 60
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct 1 ATGGAAGGTGGTCGTGGTGGTGGAGATGGCAATTTCTTACCAAACTCTAACTTTGGTGTA 60
Query 61 TTCTCTGAGTCGGCTATGGATATGGATTTCATGGATGAACTCTTCTTTGATGGATGTTGG 120
|||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 61 TTCTCTGACTCCGCTATGGATATGGATTTCATGGATGAACTCTTGTTTGATGGATGTTGG 120
Query 121 CTTGAGACAACAGATGGTAAGAGCTTCAAGCAGACCATGGGACAACCAGTTTCTGATTCT 180
||||||||||| |||||||||||||| ||||||||||||||||||| ||| || ||||||
Sbjct 121 CTTGAGACAACTGATGGTAAGAGCTTGAAGCAGACCATGGGACAACAAGTATCCGATTCT 180
Query 181 ACTATCATGAATGATAACAACAACAACTCGTACCTTTACGGTTATCAATATACTGAGAAC 240
|||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 181 ACTACCATGAATGACAACAACAACAACTCGTACCTTTACGGTTATCAATATGCTGAGAAC 240
Query 241 CTTTCACAAGATCATATATCAAATGAAGAAACAGGGAGAAAGTTTCCTCCAATAACACCG 300
||||||||||||||||| || || |||||||||||||||||||||||||||||| |||||
Sbjct 241 CTTTCACAAGATCATATCTCCAACGAAGAAACAGGGAGAAAGTTTCCTCCAATACCACCG 300
Query 301 AGCTTTCTCAAGATCGAGGATCTCTCCAATCAACTACCTTTTGACGAGGCTGCAGTTATG 360
|||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||
Sbjct 301 GGCTTTCTCAAGATCGAGGATCTCTCCAATCAAGTACCTTTTGACCAGTCTGCAGTTATG 360
Query 361 AGTTCTGCACAAGCAGAGAAGTTTCTCCTTGAAGAATCTGAGGGAGGAAGAAGATATTGG 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 AGTTCTGCACAAGCAGAGAAGTTTCTCCTTGAAGAATCTGAGGGAGGAAGAAGATATTGG 420
Query 421 ATTGCTCCAAGAACAAGCCAAGGTCCTTCTTCATCAGTGAAAGATAGATTAGTACAAGCT 480
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 421 ATTGCTCCAAGAACAAGCCAAGGTCCTTCTTCATCAGTGAAAGAGAGATTAGTACAAGCT 480
Query 481 ATAAAGGGTCTTAACGAGGCGGTGCAAGATAAAGACTTCCTCATACAGATATGGGTACCA 540
||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct 481 ATAGAGGGTCTTAACGAGGAGGTGCAAGATAAAGACTTCCTCATACAGATATGGCTACCA 540
Query 541 ATTCAACAGGAAGGCAAGAACTTTCTCACAACTTTAGAGCAGCCACACTTCTTTAACCCG 600
|||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 541 ATTCAACAAGAAGGCAAGAACTTTCTCACAACTTCGGAGCAGCCACACTTCTTCAACCCG 600
Query 601 AAATACTCGAGTCTTAAAAGATACAGAGATGTTTCAGTGGCATATAATTTCCTGGCTGAT 660
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 601 AAATACTCGAGTCTTAAAAGATATAGAGATGTTTCAGTGGCTTATAATTTCCTGGCTGAT 660
Query 661 GAGGATTCTAAAGAGTCTGTGGGTCTCCCCGGTCGTGTTTTTCTTGGGAAACTACCTGAG 720
|||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct 661 GAGGATTCTAAAGAGTCTGTTGGTCTCCCCGGTCGTGTTTTTCTTAAGAAACTACCTGAG 720
Query 721 TGGACACCTGATGTGCGGTTCTTTAGAAGCGAAGAGTATCCGCGAATCAAAGAAGCAGAG 780
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 721 TGGACACCTGATGTGCGGTTCTTTAGAAGCGAAGAGTATCCGCGGATCAAAGAAGCAGAG 780
Query 781 AAATGTGATGTCCGTGGATCATTAGCCCTTCCTGTGTTTGAAAGAGGTAGTGGGATTTGT 840
|||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 781 CAATGTGATGTTCGTGGATCATTAGCCCTTCCTGTGTTTGAAAGAGGTAGTGGAACTTGT 840
Query 841 TTGGGTGTTGTTGAGATTGTTACAACAACTCAGAAGATGAATTACAGGCCAGAGCTTGAT 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 TTGGGTGTTGTTGAGATTGTTACAACAACTCAGAAGATGAATTACAGGCCAGAGCTTGAT 900
Query 901 AATATCTGTAAAGCTCTCGAGTCTGTTAATCTAAGGAGTTCAAGAAACTTGACTCCTCCA 960
|||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||
Sbjct 901 AATATCTGTAAAGCTCTCGAGTCTGTTAATCTAAGGAGTTCAAGAAGCTTGAATCCCCCA 960
Query 961 AGCAGAGAG 969
|||||||||
Sbjct 961 AGCAGAGAG 969
> AT2G17150.1 | Symbols: | Plant regulator RWP-RK family protein
| chr2:7466841-7471258 REVERSE LENGTH=3183
Length=3183
Score = 826 bits (447), Expect = 0.0
Identities = 971/1214 (80%), Gaps = 76/1214 (6%)
Strand=Plus/Plus
Query 1070 TCTGCAGATTATATGACCTGCCTCTGGCTTTAACGTGGGCACCGTGTGCTCGGCAAGGCA 1129
||||||||| |||||| | ||||| ||||| | ||||| ||||||||||||||||| |
Sbjct 1195 TCTGCAGATCATATGATTTTCCTCTAGCTTTGTCATGGGCGCCGTGTGCTCGGCAAGGGA 1254
Query 1130 AAGTTGGATCCCGCCATTCTGATGAGAACTTCGCTGAGTGTGTTTCAACTGTTGATGATG 1189
||||||| ||||| |||||||||||||||||| |||||||||||||||| | ||| ||
Sbjct 1255 AAGTTGGTTCCCGACATTCTGATGAGAACTTCTCTGAGTGTGTTTCAACAATCGATTCTG 1314
Query 1190 CTTGCAT-TGTCCCTGATC-ATCAGAGTCGTCA-TTTCCT-AGAGGCATGTTCTGAACAC 1245
|||| | |||||| || | | ||||| | | ||| | |||||||| |||||||||
Sbjct 1315 CTTG-TTCTGTCCCCGA-CGAACAGAG-CAAAAGTTT-TTGGGAGGCATGCTCTGAACAC 1370
Query 1246 CATCTGCTTCAAGGGGAAGGCATTG-TGGGAAAAGCATTCAAAGCAACCAAACTGTTTTT 1304
|||||||| || ||||||||||||| |||| |||||||| |||| |||||||| |||||
Sbjct 1371 CATCTGCTCCAGGGGGAAGGCATTGTTGGG-AAAGCATTTGAAGCCACCAAACTCTTTTT 1429
Query 1305 CGTGCCCGAAGTAACCACTTTTAGCAAGACCAACTACCCTCTTGCACACCATGCTAAGAT 1364
||||||||||| |||| ||||||||||| |||||||| ||||||||||| || |||||
Sbjct 1430 TGTGCCCGAAGTGGCCACATTTAGCAAGACTAACTACCCCCTTGCACACCACGCCAAGAT 1489
Query 1365 CTCAGGTCTACATGCTGCTCTAGCAGTCCCGTTGAAA-AACAAATTCAATAGTTCGGTTG 1423
|| || |||||||||||| ||||||| || || ||| | |||| || | ||| |||||
Sbjct 1490 ATCTGGACTACATGCTGCTTTAGCAGTTCCATT-AAAGAGCAAA-TC--TGGTTTGGTTG 1545
Query 1424 AGTTTGTGTTCGAGTTTTTCTTTCCAAAAGCTTGCCTTGACACCGAAGCGCAACAAGAAA 1483
|||||||||| || ||||||||||| ||||| ||||||||||| ||||||||||| ||||
Sbjct 1546 AGTTTGTGTTGGAATTTTTCTTTCCGAAAGCATGCCTTGACACTGAAGCGCAACAGGAAA 1605
Query 1484 TGCTCAAGTCACTGTCTGCGACCCTTCAGCAGGATTTCAGGAGCTT-AAATCTTTTCATT 1542
||||||||||||| | || ||| || ||||| ||||||||||| || ||||||||||| |
Sbjct 1606 TGCTCAAGTCACTATGTGTGACACTGCAGCAAGATTTCAGGAG-TTCAAATCTTTTCA-T 1663
Query 1543 GATAAAGAGCTTGAGCTAGAAGTTGTATTTCCCGTTAGAGAGGA-AGTAG-T-TTTTGCA 1599
||||| || ||| ||||||| ||||| || || ||||| || | | | | || | ||
Sbjct 1664 --CAAAGACCTAGAGTTAGAAGTCGTATTACCTGTAAGAGA-GACAAT-GCTCTTCT-CA 1718
Query 1600 GAGAACCCACT-TCTTAACGCAGGAACCGGAGAGAATATGAAACCTTTGCCTTTGGA-AG 1657
|| |||| || | | | |||| ||||| |||| | | | || || ||
Sbjct 1719 GAAAACCTGCTATGTGGA-GCAGAAACCGTAGAG----T-----C---G---TT-GACAG 1761
Query 1658 ATATGTCTCA-GGAAGATTCTTCATGGATCTCACACATGATAAAGGCAAATGAGAAAGGT 1716
| || || | | |||| || ||||||||| | ||||||||||||||||| ||||| |||
Sbjct 1762 AAAT-TCAAATGCAAGAATCCTCATGGATCGCCCACATGATAAAGGCAAACGAGAAGGGT 1820
Query 1717 AAAGGCGTGTCACTTTCTTGGGAGTATCAAAAAGAAGAGCCAAAAGAAGAGTTTATGCTT 1776
|||| || ||||||||||||||||| || |||||||| || | ||||| | | |
Sbjct 1821 AAAGATGTATCACTTTCTTGGGAGTACCAGAAAGAAGATCC--TA-AAGAG---CT-C-T 1872
Query 1777 ACATCTGGATGGGATAACAATCAGATTGGTTCTGGT-CACAATAACT-TT-CTTTCAGAA 1833
||||||| |||| |||| |||| || | || || | |||||| | || |||| ||||
Sbjct 1873 -CATCTGGCCGGGAGAACAGTCAGCTT-GATCCAGTCCCCAATAA-TGTTCCTTT-AGAA 1928
Query 1834 GCTGAGCAGTTTCAG-AAGGTGTCAAATTCAGGACTCAGAATCGACAT-GGTTCCAAGTT 1891
|||||||| || ||| || | |||| | ||||||||||| ||||||| || ||||||
Sbjct 1929 GCTGAGCAATTACAGCAA-GCATCAACTCCAGGACTCAGAGTCGACATCGG-TCCAAGCA 1986
Query 1892 TTGAATCAGCTTCCTTTGGTGTTGTGGGGCAGACAT-TACTAGGCAGTAGAAGACCAGGT 1950
||||||||||| | | | || |||| | | || | || ||||||| ||||||||
Sbjct 1987 CAGAATCAGCTTCGACT-G-G-TG-GGGG-A-A-ATATGTTAAGCAGTAGGAGACCAGGG 2039
Query 1951 GAGAAGAGAAGAACAAAAACAGAAAAGACAATTGGTTTAGAAGTTCTTCGACAATACTTT 2010
||||| | |||| |||||||||||||||| ||||| || || ||||||||||||||||||
Sbjct 2040 GAGAAAAAAAGAGCAAAAACAGAAAAGACCATTGGCTTGGAGGTTCTTCGACAATACTTT 2099
Query 2011 GCAGGAAGCCTCAAAGATGCAGCTAAGAGCATTGGTGTTTGTCCAACTACCTTGAAAAGA 2070
|| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2100 GCTGGAAGCCTCAAGGATGCAGCCAAGAGCATTGGTGTTTGTCCAACTACCTTGAAAAGG 2159
Query 2071 ATATGCAGACAACACGGGATAACACGGTGGCCTTCTCGGAAGATCAAGAAAGTGGGGCAT 2130
|||||||| ||||| || |||| || ||||| || || || |||||||| || ||||||
Sbjct 2160 ATATGCAGGCAACATGGAATAATGCGATGGCCCTCCCGAAAAATCAAGAAGGTTGGGCAT 2219
Query 2131 TCATTAAAGAAACTCCAACTTGTTATAGACTCTGTTCAAGGTGTTCAAGGCTCTATTCAA 2190
|| || |||||||||||||| ||||| |||||||| ||||||| || |||||||| |||
Sbjct 2220 TCGTTGAAGAAACTCCAACTAGTTATGGACTCTGTCCAAGGTGCGCAGGGCTCTATCCAA 2279
Query 2191 CTTGATTCATTCTATACAAGTTTCCCAGAATT-AAGCTCCCCACATATGTCTGGTACTGG 2249
|| ||||||||||||||||| |||||||| || || ||||||| |||||||| | | |||
Sbjct 2280 CTCGATTCATTCTATACAAGCTTCCCAGAGTTGAA-CTCCCCAAATATGTCTAGCAATGG 2338
Query 2250 CACTTCCTTCAAGA 2263
| ||||||| ||||
Sbjct 2339 CCCTTCCTTGAAGA 2352
Score = 333 bits (180), Expect = 6e-90
Identities = 375/466 (80%), Gaps = 26/466 (6%)
Strand=Plus/Plus
Query 2461 AAGAGAGCTCGTAGCG-AGGTGAGACTGCATACCATGAATCAGGATGAAAC-AAA-GTCC 2517
|||||||||| ||||| || | |||||||| |||||||||| ||||| ||| || |
Sbjct 2517 AAGAGAGCTCATAGCGAAGCACA-ACTGCATAATGTGAATCAGGAGGAAACAAAATGT-C 2574
Query 2518 CTGTCTAGAACCCTGAGCCACAAAACATTC-AGTGAACATCCTCTT-TTCGAAAATCCAC 2575
|| | ||||||| |||||| ||||||||| || || | || | || || || ||| ||
Sbjct 2575 TTG-CAAGAACCCAGAGCCATAAAACATTCAAG-GAGCCTCTTGTTCTT-GATAATTCAT 2631
Query 2576 CTCGGTT-ACCGGAGAGTAGTAGCAGGAAGTTGAA-AGCTGGAGGGGCC-TCAAAAGTGA 2632
||| || || || ||||| | || | |||| || |||| |||| ||| || |||||||
Sbjct 2632 CTCCATTAACAGG-TAGTAGCAACACG-AGTTTAAGAGCTAGAGGTGCCATC-AAAGTGA 2688
Query 2633 AAGCCACATTTGGTGAGGCCA-AAGTACGGTTTACTTTGCTCCCTACATGGGGCTTCAG- 2690
|||| |||||||||||||||| || |||||||||| || ||||| | ||||||||| |
Sbjct 2689 AAGCGACATTTGGTGAGGCCAGAA-TACGGTTTACCTTACTCCCGAGTTGGGGCTTC-GC 2746
Query 2691 AGAGTTGCAGCATGAGATTGCTAGGCGTTTTAACATAGATAATATTGCAC-CCTTTGATC 2749
|||| || |||| ||||||||||||||||| ||||||||| | ||| | | ||||| |
Sbjct 2747 AGAGCTGAAGCAAGAGATTGCTAGGCGTTTCAACATAGATGACATTTC-CTGGTTTGACC 2805
Query 2750 TTAAGTACCTGGATGATGACAAGGAATGGGTTCTTCTGACATGTGAAGCGGATCTCGAGG 2809
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||
Sbjct 2806 TTAAGTACCTGGATGATGATAAGGAGTGGGTTCTTCTGACATGTGAAGCGGATCTCGTGG 2865
Query 2810 AATGTATCGACATTTATAGATCATCACAGAGCCGCACGATCAAGATAAG-CGTTCATGAA 2868
|||| || ||||| ||||||| | |||||| || ||| || || ||||| | | | |||
Sbjct 2866 AATGCATTGACATATATAGATTAACACAGACCCACACAATTAAAATAAGTC-TGAACGAA 2924
Query 2869 GCTTCTCAAGTCAAGCTAGGAGGTTCTTTTGGTAGCA-TCGGTCTT 2913
|||||||||||||||||| | ||||||||||| | || | ||||||
Sbjct 2925 GCTTCTCAAGTCAAGCTAAGTGGTTCTTTTGGCAACACT-GGTCTT 2969
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 161938892004
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5