BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491143
Length=1045
Score E
Sequences producing significant alignments: (Bits) Value
AT4G35100.1 | Symbols: PIP3, PIP3A, PIP2;7, SIMIP | plasma memb... 1679 0.0
AT2G16850.1 | Symbols: PIP3B, PIP2;8 | plasma membrane intrinsi... 784 0.0
AT3G53420.1 | Symbols: PIP2A, PIP2, PIP2;1 | plasma membrane in... 418 5e-116
AT3G54820.1 | Symbols: PIP2D, PIP2;5 | plasma membrane intrinsi... 326 3e-88
AT2G45960.3 | Symbols: PIP1B, TMP-A, ATHH2, PIP1;2 | plasma mem... 320 2e-86
> AT4G35100.1 | Symbols: PIP3, PIP3A, PIP2;7, SIMIP | plasma membrane
intrinsic protein 3 | chr4:16708598-16710248 FORWARD
LENGTH=1207
Length=1207
Score = 1679 bits (909), Expect = 0.0
Identities = 1017/1065 (95%), Gaps = 24/1065 (2%)
Strand=Plus/Plus
Query 1 AGAAGAGAGACACTGACGTCGTCACACAGCACCACAAACTCCATACCTAGCTTTAGAGAG 60
|||||||| |||||| ||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 3 AGAAGAGATACACTGTCGTCGTCACACAGCACCACAAACTCCATAGCTAGC--TAGAGAG 60
Query 61 -AAGAAAGAGCAAAGATGTCGAAAGAAGTGAGCGAAGAAGGAAAAACCCACCATGGGAAA 119
|| ||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 61 TAA-AAAGAACAAAGATGTCGAAAGAAGTGAGCGAAGAAGGCAAAACCCACCATGGAAAA 119
Query 120 GACTACGTGGATCCTCCACCAGCTCCGT-TTTTCGACATGGGTGAGCTCAAATCCTGGTC 178
|||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||
Sbjct 120 GACTACGTGGATCCTCCACCAGCTCC-TCTTCTCGACATGGGTGAGCTCAAATCCTGGTC 178
Query 179 TTTCTACAGAGCTCTCATCGCTGAGTTCATCGCTACACTCCTCTTCCTCTACGTCACTGT 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 179 TTTCTACAGAGCTCTCATCGCTGAGTTCATCGCTACACTCCTCTTCCTCTACGTCACCGT 238
Query 239 CGCTACTGTCATCGGCCACAAGAAGCAAACCGGTGCTTGTGACGGCGTTGGTTTACTCGG 298
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct 239 CGCTACTGTCATCGGCCACAAGAAGCAAACCGGTCCTTGTGACGGCGTTGGTTTACTTGG 298
Query 299 CATCGCTTGGGCTTTCGGTGGTATGATCTTCGTCCTCGTTTACTGCACCGCCGGTATCTC 358
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 299 TATCGCTTGGGCTTTCGGTGGTATGATCTTCGTCCTCGTCTACTGCACCGCCGGTATCTC 358
Query 359 TGGTGGTCACATTAACCCAGCTGTGACTTTCGGTCTATTCTTAGCCCGTAAGGTCTCTTT 418
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 359 TGGTGGTCACATTAACCCAGCTGTGACTTTCGGTCTGTTCTTGGCCCGTAAGGTCTCTTT 418
Query 419 GGTGAGAGCTCTTGGTTACATGATAGCTCAGTGTCTTGGAGCCATTTGTGGTGTGGGTTT 478
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 419 GGTGCGAGCTCTTGGTTACATGATAGCTCAGTGTCTTGGAGCCATTTGTGGTGTGGGTTT 478
Query 479 CGTGAAAGCTTTCATGAAAACTCCTTACAACACTCTTGGTGGAGGAGCTAACACCGTAGC 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 479 CGTGAAAGCTTTCATGAAAACTCCTTACAACACTCTTGGTGGAGGAGCTAACACCGTAGC 538
Query 539 TGACGGCTACAGCAAAGGAACTGCTCTCGGAGCTGAGATTATCGGAACTTTCGTCCTTGT 598
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 539 TGACGGTTACAGCAAAGGAACTGCTCTCGGAGCTGAGATTATTGGAACTTTCGTCCTTGT 598
Query 599 TTACACCGTTTTCTCTGCAACTGACCCTAAGAGAAGCGCTCGTGACTCTCACATCCCCGT 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 599 TTACACCGTTTTCTCTGCAACTGACCCTAAGAGAAGCGCTCGTGACTCTCACATCCCCGT 658
Query 659 TTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGTGCATTTGGCTACTATCCCCAT 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 659 TTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGTGCATTTGGCTACTATCCCCAT 718
Query 719 TACCGGAACTGGTATCAACCCAGCAAGAAGCTTTGGTGCTGCTGTTATCTACAACAACGA 778
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 719 TACTGGAACTGGTATCAACCCAGCTAGAAGCTTTGGTGCTGCTGTTATCTACAACAACGA 778
Query 779 GAAGGCGTGGGATGACCAATGGATCTTTTGGGTTGGTCCGTTCTTGGGAGCACTAGCTGC 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 779 GAAGGCGTGGGATGACCAATGGATCTTTTGGGTTGGTCCGTTCTTGGGAGCACTAGCTGC 838
Query 839 AGCCGCTTACCATCAATACATATTGAGAGCTTCAGCAATTAAGGCCTTGGGCTCTTTCCG 898
||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 839 AGCAGCTTACCACCAATACATATTGAGAGCTTCAGCAATTAAGGCCTTGGGCTCGTTCCG 898
Query 899 AAGCAACGCAACCAATTAATGAA---T--------G-T---G--AAGAAACAACTTTAAG 941
||||||||||||||||||||||| | | | | ||||||||||||||||
Sbjct 899 AAGCAACGCAACCAATTAATGAAGGCTTTTTTTAAGATAATGTCAAGAAACAACTTTAAG 958
Query 942 ATTTATATGCTTTA-TTATTATTTGTTGTTCTTTTGTGTGTAATGAGAGAGATGGTGGAT 1000
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 ATTTATATGCTTTAATTATTATTTGTTGTTCTTTTGTGTGTAATGAGAGAGATGGTGGAT 1018
Query 1001 TGATGTTAATTATGAAATGGCTCAGTGACTTCTGTTTCTTTCTTT 1045
||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct 1019 TGATGTTAATTATGAAATGGCTCAGTGACTTCTATTTCCTTCTTT 1063
> AT2G16850.1 | Symbols: PIP3B, PIP2;8 | plasma membrane intrinsic
protein 2;8 | chr2:7301581-7303437 FORWARD LENGTH=1160
Length=1160
Score = 784 bits (424), Expect = 0.0
Identities = 720/861 (84%), Gaps = 28/861 (3%)
Strand=Plus/Plus
Query 71 AAAGATGTCGAAAGAAGTGAGCGAAGAAGGAAAAACCCACCATGGGAAAGACTACGTGGA 130
||| ||||| ||||||||||| |||||||| || | ||||| ||||||||||||||
Sbjct 63 AAAAATGTCAAAAGAAGTGAGTGAAGAAGG---AA--GA-CATGGCAAAGACTACGTGGA 116
Query 131 TCCTCCACCAGCTCCGTTTTTCGACATGGGTGAGCTCAAATC-CTGGTCTTTCTACAGAG 189
||| || |||||||| || | ||||||| |||||| || | ||||||||| |||||||
Sbjct 117 TCCACCTCCAGCTCCACTTCTAGACATGGCTGAGCT-TAAGCTCTGGTCTTTTTACAGAG 175
Query 190 CTCTCATCGCTGAGTTCATCGCTACACTCCTCTTCCTCTACGTCACTGTCGCTACTGTCA 249
|| ||||||| ||||||||||| || |||||||||||||| || || || ||||| ||||
Sbjct 176 CTATCATCGCAGAGTTCATCGCCACTCTCCTCTTCCTCTATGTAACCGTAGCTACAGTCA 235
Query 250 TCGGCCACAAGAAGCAAACCGGTGCTTGTGACGGCGTTGGTTTACTCGGCATCGCTTGGG 309
| ||||||||||| ||||||||| |||||| ||| ||||||||||||||||| || ||||
Sbjct 236 TTGGCCACAAGAACCAAACCGGTCCTTGTGGCGGTGTTGGTTTACTCGGCATTGCGTGGG 295
Query 310 -CTTTCGGTGGTATGATCTTCGTCCTCGTTTACTGCACCGCCGGTATCTCTGGTGGTCAC 368
|||| ||||| |||||||| |||||||| || ||||||||||||||||| || ||||||
Sbjct 296 CCTTT-GGTGGCATGATCTTTGTCCTCGTCTATTGCACCGCCGGTATCTCCGGAGGTCAC 354
Query 369 ATTAACCCAGCTGTGAC-TTTCGGTCTATTCTTAGCCCGT-AAG-GTCTCTTTGGTGAGA 425
||||||||||||||||| ||| ||||| ||||| || ||| ||| ||| | | | |||
Sbjct 355 ATTAACCCAGCTGTGACATTT-GGTCTGTTCTTGGCTCGTAAAGTGTCGC-TCCCT-AGA 411
Query 426 GCTCTTGGTTACATGATAGCTCAGTGTCTTGGAGCCATTTGTGGTGTGGGTTTCGTGAAA 485
|| ||| ||||||| | |||||||||||||||||||||||||| || || |||| ||
Sbjct 412 GCAGTTGCTTACATGGTGGCTCAGTGTCTTGGAGCCATTTGTGGAGTTGGACTCGTTAAG 471
Query 486 G-CTTTCATGAAAACTCCTTACAACAC-TCTTGGTGGAGGAGCTAACACCGTAGCTGACG 543
| |||| |||| ||||| || || || ||| || || |||||||||||||||||||| |
Sbjct 472 GCCTTT-ATGATGACTCCATATAA-ACGTCTCGGAGGCGGAGCTAACACCGTAGCTGATG 529
Query 544 GCTACAGCAAAGGAACTGCTCTCGGAGCTGAGATTATCGGAAC-TTTCGTCCTT-GTTTA 601
| || |||| ||||||||||| || ||||||||||| || || ||| || ||| |||||
Sbjct 530 GTTATAGCACCGGAACTGCTCTTGGTGCTGAGATTATTGGCACATTT-GT-CTTGGTTTA 587
Query 602 CACCGTTTTCTCTGCAACTGACCCTAAGAGAAGCGCTCGTGACTCTCACATCCCCGTTTT 661
||| || ||||| || |||||||| || ||||| || |||||||||||| |||| |||||
Sbjct 588 CACTGTCTTCTCCGCCACTGACCCCAAAAGAAGTGCCCGTGACTCTCACGTCCCGGTTTT 647
Query 662 GGCTCCACTT-CCAATTGGATTTGCTGTGTTCATGGTGCATTTGGCTACTATCCCCATTA 720
|||||| || || || || |||||||||||||||||||||||||||||||||||||| |
Sbjct 648 GGCTCC-GTTACCTATAGGGTTTGCTGTGTTCATGGTGCATTTGGCTACTATCCCCATAA 706
Query 721 CCGGAACTGGTATCAACCCAGCAAGAAGCTTTGGTGCTGCTGTTATCTACAACAACGAGA 780
| |||||||| || || ||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 707 CTGGAACTGGGATTAATCCAGCCAGAAGCTTTGGTGCTGCTGTTATCTACAACAATGAGA 766
Query 781 AGGCGTGGGATGACCAATGGATCTTTTGGGTTGGTCCGTTCTTGGGAGCACTAGCTGCAG 840
| || ||||| ||||| ||||||||||||||||| || ||| |||||||| |||| ||||
Sbjct 767 AAGCTTGGGACGACCATTGGATCTTTTGGGTTGGACCATTCGTGGGAGCATTAGCAGCAG 826
Query 841 CCGCTTACCATCAATACATATTGAGAGCTTCAGCAATTAAGGCCTTGGGCT-CTTTCCGA 899
| || ||||||||||| || ||||||||| ||||||| || || |||| || | |||||
Sbjct 827 CAGCATACCATCAATATATCTTGAGAGCTGCAGCAATCAAAGCTTTGG-CTTCATTCCGC 885
Query 900 AGCAACGCAACCAATTAATGA 920
|||||| ||||||||| ||||
Sbjct 886 AGCAACCCAACCAATTGATGA 906
> AT3G53420.1 | Symbols: PIP2A, PIP2, PIP2;1 | plasma membrane
intrinsic protein 2A | chr3:19803655-19805713 REVERSE LENGTH=1374
Length=1374
Score = 418 bits (226), Expect = 5e-116
Identities = 610/786 (78%), Gaps = 64/786 (8%)
Strand=Plus/Plus
Query 129 GATCCTCCACCAGCTCCGTTT-TTCGACATGG-G-TGAGCTCAAA-TCCTGGTCTTTCTA 184
||||| ||||||||||||||| || | |||| | ||||| ||| |||||||||||
Sbjct 317 GATCCGCCACCAGCTCCGTTTATT-G--ATGGAGCGGAGCT-AAAGAAGTGGTCTTTCTA 372
Query 185 CAGAGCTCTCATCGCTGAGTTCATCGCTACACTCCTCTTCCTCTACGTCACTGTCGCT-A 243
|||||| | ||||| |||||| | || || ||||||||| | ||| |||| || | |
Sbjct 373 CAGAGCAGTTATCGCAGAGTTCGTAGCCACTCTCCTCTTCTTATACATCACCGT-TTTGA 431
Query 244 CTGTCATCGGCCACAAGA---AG--C-A-A---A--CCGGT-GC-----TTGTGACGGCG 285
| |||||||| |||||| || | | | | ||||| || ||| | ||| |
Sbjct 432 CAGTCATCGGTTACAAGATTCAGTCCGATACTGATGCCGGTGGCGTAGATTGCGGCGGAG 491
Query 286 TTGGTTTACTCGGCATCGCTTGGG-CTTTCGGTGGTATGATCTTCGTCCTCGTTTACTGC 344
|||| | ||||| |||||||||| |||| ||||||||||||||| ||||||| ||||||
Sbjct 492 TTGGAATCCTCGGTATCGCTTGGGCCTTT-GGTGGTATGATCTTCATCCTCGTCTACTGC 550
Query 345 ACCGCCGGTATCTCTGGTGGTCACATTAACCCAGCTGTGAC-TTTCGGTCTATTCTTAGC 403
||||||||||||||||||||||||||||||||||| ||||| ||| || |||||||| ||
Sbjct 551 ACCGCCGGTATCTCTGGTGGTCACATTAACCCAGCGGTGACATTTGGG-CTATTCTTGGC 609
Query 404 CCGTAAGGTCTCTTTGG-TGAGAGCTCT-TGGTTACATGATAGCTCAGTGTCTTGGA-GC 460
||||| || || || | || || || | || |||| || ||||||||| |||| ||
Sbjct 610 ACGTAAAGTGTCGTTACCT-AGGGCCCTATTGT-ACATAATCGCTCAGTGT-TTGGGTGC 666
Query 461 CATTTGTGGTGTGGGTTTCGTGAAAGCTTTCATGAAAACTCCTTACAACACTC-TT--GG 517
|||||||| || ||||| || ||||| ||| ||| ||| |||| |||| | || ||
Sbjct 667 GATTTGTGGAGTTGGTTTTGTCAAAGCCTTCC--AAAGCTC-TTACTACACCCGTTACGG 723
Query 518 TGGAGGAGCTAACAC-CGTAGCTGACGGCTACAGCAAAGGAACTGCTCTCGGAGCTGAGA 576
|| ||||| ||| | | |||| || |||||||||| ||| || | ||| | || ||||
Sbjct 724 AGGTGGAGCCAACTCTC-TAGCCGATGGCTACAGCACAGGGACCGGTCTAGCCGCAGAGA 782
Query 577 TTATCGGAACTTTCGTCCTTGTTTACACCGTTTTCTCTGCAACTGACCCTAAGA-GAAGC 635
| || || |||||||| ||||| |||||||| |||||||| |||||||| || | | ||
Sbjct 783 TCATTGGTACTTTCGTTCTTGTCTACACCGTCTTCTCTGCCACTGACCCCAA-ACGTAGT 841
Query 636 GCTC-GTGACTCTCACATCCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCAT 694
|| | | ||||| ||| | || || ||||| ||||||||||| |||||||| ||||||||
Sbjct 842 GC-CAGAGACTCCCACGTTCCGGTGTTGGCGCCACTTCCAATCGGATTTGCCGTGTTCAT 900
Query 695 GGTGCATTTGGCTACTATCCCCATTACCGGAACTGGTATCAACCCAGCAAGAAGCTTT-G 753
||| ||||||||||| || |||||||||||||| || || ||||| ||||| || ||| |
Sbjct 901 GGTACATTTGGCTACCATTCCCATTACCGGAACCGGAATTAACCCGGCAAGGAG-TTTCG 959
Query 754 GTGCTGCTGTTATCTACAACAACGAG-AAGGCGTGGGATGACCAATGGATCTTTTGGGTT 812
| ||||| || ||||||||||| ||| ||| | ||||||||||| ||||| |||||||||
Sbjct 960 GAGCTGCCGTAATCTACAACAA-GAGCAAGCCATGGGATGACCACTGGATATTTTGGGTT 1018
Query 813 GGTCCGTTC-TTGG-GA-GC-ACTAGCTGCAGCCGCTTACCATCAATACATAT-TGAGAG 867
|| || ||| |||| | || | |||||||| | | |||| |||| | | | ||||||
Sbjct 1019 GGACCATTCATTGGAGCTGCGA-TAGCTGCATTC--T-ACCACCAATTCGT-TCTGAGAG 1073
Query 868 CTTCAG 873
||||||
Sbjct 1074 CTTCAG 1079
> AT3G54820.1 | Symbols: PIP2D, PIP2;5 | plasma membrane intrinsic
protein 2;5 | chr3:20302021-20304010 FORWARD LENGTH=1229
Length=1229
Score = 326 bits (176), Expect = 3e-88
Identities = 519/679 (76%), Gaps = 46/679 (7%)
Strand=Plus/Plus
Query 174 TGGTCTTTCTACAGAGCTCTCATCGCTGAGTTCATCGCTACACTCCTCTTCCTCTACGTC 233
||||||||||||||||||||||||||||||||||| || || ||||| |||||||| |||
Sbjct 196 TGGTCTTTCTACAGAGCTCTCATCGCTGAGTTCATAGCCACTCTCCTTTTCCTCTATGTC 255
Query 234 ACTGTCGCT-ACTGTCATCGGCCACAAGAAGCAA-ACCGGT---GC--T---T---G--- 277
||| | | ||||||||||| |||||| || | |||| | || | | |
Sbjct 256 ACTATTA-TGACTGTCATCGGTTACAAGA-GCCAGACCGATCCAGCCCTGAATCCTGACC 313
Query 278 --TG-AC-GGCGTTGGTTTACTCGGCATCGCTTGGGC-TTTCGGTGGTATGATCTTCGTC 332
|| || |||||||| | || || ||||| ||||| ||| ||||| ||||||||| ||
Sbjct 314 AGTGTACAGGCGTTGGCGTCCTTGGTATCGCATGGGCCTTT-GGTGGCATGATCTTCATC 372
Query 333 CTCGTTTACTGCACCGCCGGTATCTCTGGTGGTCACATTAACCCAGCTGTGACTTTCGGT 392
||||| |||||||||||||| ||||||||||| || ||||| || || |||||||| ||
Sbjct 373 CTCGTCTACTGCACCGCCGGCATCTCTGGTGGGCATATTAATCCGGCAGTGACTTTTGGG 432
Query 393 CTATTCTTAGCCCGTAAGGTCTCTTTGGTGAGAGCTCTTGGT-TACATGATAGCTCAGTG 451
|| || || || || || || | ||||||||||| | | | |||||| | ||||||||
Sbjct 433 CTGTTGTTGGCTCGGAAAGTGACGTTGGTGAGAGCAGT-GATGTACATGGTGGCTCAGTG 491
Query 452 TCTTGGAGCCATTTGTGGTGTGGGTTTCGTGAAAGCTTTC-ATGAAAACTCCTTACAACA 510
|| || |||||||||||||||| ||| || || || ||| | | || ||||| ||
Sbjct 492 CCTCGGTGCCATTTGTGGTGTGGCTTTGGTCAAGGCCTTCCA-GT---CTGCTTACTTCA 547
Query 511 CTCT-T--GGTGGAGGAGCTAACACCGTAGCT--GACGGCTACAGCAAAGGAACTGCTCT 565
| | | ||||| || || || | || || ||||| ||||||| || || | | |
Sbjct 548 CCCGCTACGGTGGTGGCGC-AA-ATGGTCTCTCTGACGGTTACAGCATCGGCACCGGTGT 605
Query 566 CGGAGCTGAGATTATCGGAACTTTCGTCCTT-GTTTACACCGTTTTCTCTGCAACTGA-C 623
| ||| ||||| || || || |||||| || || |||||||| |||||||| ||||| |
Sbjct 606 TGCAGCCGAGATCATTGGTACATTCGTC-TTAGTCTACACCGTCTTCTCTGCCACTGATC 664
Query 624 CCTAAGAGAAGCGCTCGTGACTCTCACATCCCCGTTTTGGCTCCACTT-CCAATTGGATT 682
|| ||||| || || |||||||||||| | || || ||||||||| || |||||||||||
Sbjct 665 CC-AAGAGGAGTGCGCGTGACTCTCACGTTCCTGTATTGGCTCCA-TTGCCAATTGGATT 722
Query 683 TGCTGTGTTCATGGTGCATTTGGCTACTATCCCCATTACCGGAACTGGTATCAACCCAGC 742
||| |||||||| || || || ||||| ||||| || || || |||||||||||||| ||
Sbjct 723 TGCAGTGTTCATCGTTCACTTAGCTACAATCCCAATCACGGGCACTGGTATCAACCCTGC 782
Query 743 AAGAAG-CTTTGGTGCTGCTGTTATCTACAACAACGAGAAGGCGTGGGATGACCAATGGA 801
|||||| || || ||||| | ||||||||||| || || || ||||| | || ||||
Sbjct 783 AAGAAGTCTC-GGAGCTGCAATCATCTACAACAAGGACAAAGCTTGGGACCATCATTGGA 841
Query 802 TCTTTTGGGTTGGTCCGTT 820
| || ||||| ||||||||
Sbjct 842 TATTCTGGGTGGGTCCGTT 860
> AT2G45960.3 | Symbols: PIP1B, TMP-A, ATHH2, PIP1;2 | plasma membrane
intrinsic protein 1B | chr2:18910295-18911982 FORWARD
LENGTH=1299
Length=1299
Score = 320 bits (173), Expect = 2e-86
Identities = 438/561 (78%), Gaps = 37/561 (7%)
Strand=Plus/Plus
Query 300 ATCGCTTGGGCTTTCGGTGGTATGATCTTCG-TCCTCGTTTACTGCACCGCCGGTATCTC 358
||||||||||||||||||||||||||||||| || |||| ||||||||||| ||||||||
Sbjct 423 ATCGCTTGGGCTTTCGGTGGTATGATCTTCGCTC-TCGTCTACTGCACCGCTGGTATCTC 481
Query 359 TGGTGGTCACATTAACCCAGCTGTGACTTTCGGTCTATTCTTAGCCCGTAAGGTCTCTTT 418
||||| ||||| |||||||| || || |||||| | |||||||| | ||| || ||
Sbjct 482 CGGTGGACACATCAACCCAGCGGTTACGTTCGGTTTGTTCTTAGCTAGGAAG--CT-TTC 538
Query 419 GGTGA---GAGCTCT-TGGTTACAT-GATAGCT-CAGTGTCTT-GGAGCCATTTGTGGTG 471
| | | ||||| | | | |||| | | | | ||||| ||| ||||| || ||||| |
Sbjct 539 GCTCACACGAGCTGTGTACT-ACATAG-T-GATGCAGTG-CTTAGGAGCTATCTGTGGAG 594
Query 472 -TGGGTTTCGTGAAAGCTTTC-ATGA-AAACTCCTTACAACACTCTTGGT-GGAGGAGCT 527
||| | | || || | ||| | | ||| | ||| | || |||| || |||||
Sbjct 595 CTGG-TGTGGTCAAGGGGTTCCA-GCCAAAG-CAATACCAGGCT-TTGGGAGGTGGAGCC 650
Query 528 AACACCGTAGCTGACGGCTACAGCAAAGGAACTGCTCTCGGAGCTGAGATTATCGGAAC- 586
|||||| ||||| | ||||||| |||||||| || ||| |||||||||||||| |||||
Sbjct 651 AACACCATAGCTCATGGCTACACCAAAGGAAGTGGTCTTGGAGCTGAGATTATTGGAACC 710
Query 587 TTTCGTCCTTGTTTACACCGTTTTCTCTGCAACTGAC-CCTAAGAGAAGCGCTCGTGACT 645
||| ||||||||||||||||| |||||||| ||||| || ||||||| |||||||||||
Sbjct 711 TTT-GTCCTTGTTTACACCGTCTTCTCTGCCACTGATGCC-AAGAGAAACGCTCGTGACT 768
Query 646 CTCACATCCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGTGCATTTGG 705
|||| | || || | || || || || || ||||| ||||||||| |||| || || |
Sbjct 769 CTCATGTTCCTATTCTAGCACCGCTCCCTATCGGATTCGCTGTGTTCTTGGTTCACTTAG 828
Query 706 CTACTATCCCCATTACCGGAACTGGTATCAACCCAGCAAGAAG-CTTTGGTGCTGCTGTT 764
| || ||||||||||| |||||||| ||||||||||||||||| ||| || ||||| |
Sbjct 829 CAACCATCCCCATTACTGGAACTGGAATCAACCCAGCAAGAAGTCTT-GGAGCTGCAATC 887
Query 765 ATCTACAACAACGAGAAGGCGTGGGATGACCA----ATGGATCTTTTGGGTTGGTCCGTT 820
|||| |||||| || || || ||||||||||| |||| ||||||||||||| || ||
Sbjct 888 ATCTTCAACAAGGACAACGCTTGGGATGACCACGTGATGGGTCTTTTGGGTTGGACCATT 947
Query 821 C-TTGG-GA-GCACTAGCTGC 838
| |||| | ||||| |||||
Sbjct 948 CATTGGTGCTGCACTTGCTGC 968
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51238829940
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5