BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491144
Length=1919
Score E
Sequences producing significant alignments: (Bits) Value
AT4G35090.1 | Symbols: CAT2 | catalase 2 | chr4:16700596-167033... 2841 0.0
AT1G20620.1 | Symbols: CAT3, SEN2, ATCAT3 | catalase 3 | chr1:7... 894 0.0
> AT4G35090.1 | Symbols: CAT2 | catalase 2 | chr4:16700596-16703325
REVERSE LENGTH=1930
Length=1930
Score = 2841 bits (1538), Expect = 0.0
Identities = 1785/1899 (94%), Gaps = 38/1899 (2%)
Strand=Plus/Plus
Query 35 CATCTCCTCGTTTTTGATAAACTCTCTCTGAATCTCTCCAAACTCTCTTCTCATC-AACT 93
|||||||||| |||||||||| ||||||||||||||||| ||||||||||||| |||
Sbjct 53 CATCTCCTCG-TTTTGATAAA-AATCTCTGAATCTCTCCAAGCTCTCTTCTCATCAAACC 110
Query 94 ATGGATCCTTACAAGTATCGTCCAGCTAGTTCTTACAACTCTCCCTTCTTCACCACCAAC 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 111 ATGGATCCTTACAAGTATCGTCCAGCTAGTTCTTACAACTCTCCCTTCTTCACCACCAAC 170
Query 154 TCTGGTGCTCCTGTATGGAACAACAACTCCTCCATGACCGTTGGACCCAGAGGTCCTATC 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 171 TCTGGTGCTCCTGTATGGAACAACAACTCCTCCATGACCGTTGGACCCAGAGGTCCTATC 230
Query 214 CTTCTTGAGGACTATCATCTGGTTGAGAAGCTTGCCAATTTCGACAGGGAACGGATTCCA 273
||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 231 CTTCTTGAGGATTACCATCTCGTTGAGAAGCTTGCCAATTTCGACAGGGAACGGATTCCA 290
Query 274 GAGCGTGTCGTTCATGCCAGGGGAGCTAGTGCTAAAGGtttttttGAGGTCACTCATGAT 333
|||||||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||||
Sbjct 291 GAGCGTGTGGTTCATGCCAGAGGAGCCAGTGCTAAAGGTTTCTTTGAGGTCACTCATGAT 350
Query 334 ATATCTAACCTCACTTGTGCTGATTTTCTCCGAGCTCCTGGTGTTCAGACTCCTGTCATT 393
|| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 351 ATCTCTAACCTCACTTGTGCTGACTTTCTCCGAGCTCCCGGTGTTCAGACTCCTGTCATT 410
Query 394 GTGCGGTTCTCCACCGTTATCCATGAGCGTGGAAGTCCCGAGACCTTGAGAGACCCTCGT 453
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 411 GTCCGGTTCTCCACCGTTATCCATGAGCGTGGAAGTCCCGAGACCTTGAGAGACCCTCGT 470
Query 454 GGTTTTGCAGTCAAGTTCTACACCAGAGAGGGAAACTTTGATCTTGTTGGAAACAACTTT 513
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 471 GGTTTTGCAGTCAAGTTCTACACCAGAGAGGGGAACTTTGATCTTGTTGGAAACAACTTT 530
Query 514 CCGGtttttttCATCCGCGATGGGATGAAGTTCCCTGACATGGTTCACGCCCTTAAGCCG 573
|| ||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 531 CCTGTTTTCTTCATCCGCGATGGGATGAAGTTCCCTGACATGGTCCACGCTCTTAAGCCG 590
Query 574 AACCCGAAATCTCACATCCAGGAGAACTGGAGAATCCTTGACTTCTTCTCCCACCACCCT 633
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 591 AACCCAAAATCTCACATCCAAGAGAACTGGAGAATCCTTGACTTCTTCTCCCACCACCCT 650
Query 634 GAAAGTTTGAACATGTTCACTTTCCTCTTCGATGATATCGGTATCCCACAAGATTACAGG 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 651 GAAAGTTTGAACATGTTCACTTTCCTCTTCGATGATATCGGTATCCCACAAGATTACAGG 710
Query 694 CACATGGACGGTTCAGGTGTCAACACATACATGTTGATCAACAAAGCTGGCAAAGCTCAC 753
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 711 CACATGGATGGTTCAGGTGTCAATACATACATGTTGATCAACAAAGCTGGCAAAGCTCAC 770
Query 754 TACGTGAAGTTCCACTGGAAACCAACTTGTGGAGTCAAGTCTCTTTTGGAAGAAGATGCG 813
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 771 TACGTGAAGTTCCATTGGAAACCAACTTGTGGAGTCAAGTCTCTTTTGGAAGAAGATGCA 830
Query 814 ATTCGTGTTGGAGGAACCAACCACAGTCACGCGACTCAGGACTTGTATGACTCAATTGCT 873
||||||||||||||||||||||||||||| |||||||| |||||||||||||| || |||
Sbjct 831 ATTCGTGTTGGAGGAACCAACCACAGTCATGCGACTCAAGACTTGTATGACTCTATAGCT 890
Query 874 GCTGGAAACTACCCTGAATGGAAGCTCTTTATCCAAATCATTGATCCAGCTGATGAAGAC 933
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 891 GCTGGAAACTACCCTGAATGGAAGCTCTTTATCCAAATCATTGATCCTGCTGATGAAGAC 950
Query 934 AAGTTCGACTTTGACCCGCTCGATGTGACCAAGACCTGGCCTGAAGATATCTTACCTCTC 993
|||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 951 AAGTTCGACTTTGACCCGCTCGATGTGACCAAGACCTGGCCTGAGGATATCTTGCCTCTT 1010
Query 994 CAACCTGTTGGTCGTATGGTGTTGAACAAGAACATTGACAACTTCTTTGCAGAGAATGAG 1053
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1011 CAACCTGTTGGACGTATGGTGTTGAACAAGAACATTGACAACTTCTTTGCAGAGAATGAG 1070
Query 1054 CAACTTGCCTTCTGCCCTGCAATCATTGTTCCC-GGGATACACTACTCAGACGACAAGCT 1112
|||||||| ||||| |||||||| ||||| ||| |||||||| |||||||| || |||||
Sbjct 1071 CAACTTGCTTTCTGTCCTGCAATTATTGT-CCCAGGGATACATTACTCAGATGATAAGCT 1129
Query 1113 GCTTCAAACCCGTGTCTTCTCCTATGCCGACACTCAGAGACACCGTCTTGGACCAAACTA 1172
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1130 GCTTCAAACCCGTGTCTTCTCCTATGCCGATACTCAGAGACACCGTCTTGGACCAAACTA 1189
Query 1173 CCTTCAGCTACCAGTCAATGCCCCAAAATGTGCTCACCACAACAACCACCATGAGGGATT 1232
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1190 CCTTCAGCTGCCAGTCAATGCTCCAAAATGTGCTCACCACAACAACCACCATGAGGGATT 1249
Query 1233 CATGAATTTCATGCACAGGGACGAGGAGGTCAATTACTTCCCATCAAGGTATGACCAGGT 1292
|||||||||||||||||||||||||||||| || |||||||| || ||||||||||||||
Sbjct 1250 CATGAATTTCATGCACAGGGACGAGGAGGTTAACTACTTCCCGTCGAGGTATGACCAGGT 1309
Query 1293 TCGTCATGCTGAGAAGTATCCAACTCCGCCTGCTGTCTGCTCTGGAAAACGTGAGAGGTG 1352
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1310 TCGTCATGCTGAGAAGTATCCAACTCCGCCTGCTGTCTGTTCTGGAAAACGTGAGAGGTG 1369
Query 1353 CATTATTGAGAAAGAGAACAACTTCAAGGAGCCTGGAGAGAGATACCGTTCATTTACACC 1412
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 1370 CATTATTGAGAAAGAGAACAACTTCAAGGAGCCTGGAGAGAGATACCGTACCTTTACACC 1429
Query 1413 AGAGAGGCAAGAACGCTTCATCCAGAGATGGATTGAAGCCTTATCCGACCCTCGCATCAC 1472
||||||||||||||| |||||||||||||||||||| ||| |||||||||| ||||||||
Sbjct 1430 AGAGAGGCAAGAACGATTCATCCAGAGATGGATTGATGCCCTATCCGACCCACGCATCAC 1489
Query 1473 GCATGAAATCCGCAGCATCTGGATCTCTTACTGGTCTCAGGCTGACAAGTCTCTGGGACA 1532
||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||
Sbjct 1490 GCATGAAATCCGCAGTATCTGGATCTCTTACTGGTCTCAGGCTGATAAGTCTTTGGGACA 1549
Query 1533 GAAGCTGGCAAGCCGTCTCAACGTGAGACCAAGCATCTAAAATGAGTGTTGCTAGTGAAA 1592
|||||||||||||||||| ||||||||||||||||||||||| ||||| | ||
Sbjct 1550 GAAGCTGGCAAGCCGTCTGAACGTGAGACCAAGCATCTAAAACGAGTG-----A---AA- 1600
Query 1593 GAAATTCTTGATTGGCCTTTGTGTGGTTCT-AATTAGCAGAGAAGAAAGAAGATGGGAAG 1651
||| |||||||||||||||| ||||||| | ||||||||||||| || ||| ||||||||
Sbjct 1601 GAA-TTCTTGATTGGCCTTTCTGTGGTTGTTAATTAGCAGAGAA-AA-GAAAATGGGAAG 1657
Query 1652 AGATCAAAGTTGCGATAATACAATCTTCATCATGTGGATCTTATGTGCTATGTTGTAATA 1711
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 1658 AGATCAAAGTTGCGATAATACAATCTTCATCATGTGGATCTTCTGTGCTATGTTATAATA 1717
Query 1712 GTATCTGTTTAAAGACCaaaaaaaCCTTGTGTGTTGTTGTCACTCTCCTGTTTATCAGAA 1771
||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||
Sbjct 1718 GTATCTGTTTAAAGACCAAAAGAACCTTGTGTGTTGTTGTGTCTCTC--GTTTATCAGAA 1775
Query 1772 TAATACATTATATACATGTTGAAGATTTATAATC-G-G-TGTTATTTGATGAAAGATCCT 1828
|||||||||||| ||| | |||||||||||||| | | ||||| |||||||||| ||||
Sbjct 1776 TAATACATTATA--CAT-T-GAAGATTTATAATCCGTGGTGTTACTTGATGAAAGCTCCT 1831
Query 1829 TCTTCCTTGAAAAAATGTGACAGACATGTCT-A-ATGTT-CTCATATATTAACGAA-G-A 1883
|||||||||||| | ||||||| | | ||| | || || |||||||||||||||| | |
Sbjct 1832 TCTTCCTTGAAAGATTGTGACATA--T-TCTTATATATTTCTCATATATTAACGAATGTA 1888
Query 1884 --CC-GTAAGAGCTGTCGACAAAGATGTGTTTTTTAGTC 1919
|| |||||||||||||||||||| ||| |||||||||
Sbjct 1889 ATCCCGTAAGAGCTGTCGACAAAGACGTGATTTTTAGTC 1927
> AT1G20620.1 | Symbols: CAT3, SEN2, ATCAT3 | catalase 3 | chr1:7143067-7146540
FORWARD LENGTH=1901
Length=1901
Score = 894 bits (484), Expect = 0.0
Identities = 1192/1526 (78%), Gaps = 79/1526 (5%)
Strand=Plus/Plus
Query 85 TCATCAACTATGGATCCTTACAAGTATCGTCCAGCTAGTTCTTACAACTCTCCC-TTCTT 143
||||| || ||||||||||||||||||||||| | || | |||||| | ||| ||||
Sbjct 68 TCATC-ACCATGGATCCTTACAAGTATCGTCCTTCAAGCGCGTACAACGC-CCCATTCTA 125
Query 144 CACCACCAACTCTGGTGCTCCTGTATGGAACAACAACTCCTCCATGACCGTTGGACCCAG 203
|||||| ||| ||||||||| || | ||||||| ||| ||| | ||| | ||| ||
Sbjct 126 CACCACAAACGGTGGTGCTCCAGTCTCCAACAACATCTCTTCCCTCACCATCGGAGAAAG 185
Query 204 AGGTCCTATCCTTCTTGAGGACTATCATCTGGTTGAGAAGCTTGCCAATTTCGA-CAGGG 262
|||||| | ||||||||||| |||||| || | |||||| |||| |||||| | ||| |
Sbjct 186 AGGTCCGGTTCTTCTTGAGGATTATCATTTGATCGAGAAGGTTGCTAATTTC-ACCAGAG 244
Query 263 A-ACGGATTCCAGAGCGTGTCGTTCATGCCAG-GGGAGCTAGTGCTAAAGGtttttttGA 320
| | |||| || ||| | || |||||||| || || | | |||||||| ||||| |||||
Sbjct 245 AGA-GGATCCCTGAGAGAGTGGTTCATGCTAGAGGAATC-AGTGCTAAGGGTTTCTTTGA 302
Query 321 GGTCACTCATGATATATCTAACCTCACTTGTGCTGATTTTCTCCGAGCTCCTGGTGTTCA 380
||||| ||||| || || |||||||||||||||||||||||| |||| |||||||||||
Sbjct 303 AGTCACCCATGACATTTCAAACCTCACTTGTGCTGATTTTCTCAGAGCCCCTGGTGTTCA 362
Query 381 GACTCCTGTCATTGTGCGGTTCTCCACCGTTATCCATGAGCGTGGAAGTCCCGAGACCTT 440
||||| || ||||| || |||||||||||| |||| || |||| ||||| || ||| |
Sbjct 363 AACTCCGGTTATTGTCCGTTTCTCCACCGTTGTCCACGAACGTGCCAGTCCTGAAACCAT 422
Query 441 GAGAGACCCTCGTGGTTTTGCAGTCAAGTTCTACACCAGAGAGGGAAACTTTGATCTTGT 500
||| || |||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 423 GAGGGATATTCGTGGTTTTGCTGTCAAGTTTTACACCAGAGAGGGAAACTTTGATCTTGT 482
Query 501 TGGAAACAACTTTCCGGtttttttCATCCGCGATGGGATGAAGTTCCCTGACATGGTTCA 560
||| |||||| |||||| || |||||||| |||||||| ||||||| || | || ||
Sbjct 483 TGGGAACAACACTCCGGTGTTCTTCATCCGTGATGGGATTCAGTTCCCGGATGTTGTCCA 542
Query 561 CGCCCTT-AAGCCGAACCCGAAATCTCACATCCAGGAGAACTGGAGAATCCTTGACTTCT 619
||| || || || ||||||||| | ||||||| ||| ||||||| || || |||| |
Sbjct 543 CGCG-TTGAAACCTAACCCGAAAACAAACATCCAAGAGTACTGGAGGATTCTGGACTACA 601
Query 620 TCTCCCACCACCCTGAAAGTTTGA--ACATGTTCACTTTCCTCTTCGATGATATCGGTAT 677
| |||||| ||||| |||||| ||||| | || | || |||||| | |||||
Sbjct 602 TGTCCCACTTGCCTGAGAGTTTGCTCACATGGTG-CTGGA-TGTTTGATGATGTTGGTAT 659
Query 678 CCCACAAGATTACAGGCACATGGACGGTT-CAGGTGTCAACACATACA-TGTTGATCAAC 735
||||||||||||||||||||||| |||| | |||||| |||| |||| | || || |
Sbjct 660 TCCACAAGATTACAGGCACATGGAGGGTTTC-GGTGTCCACACCTACACTCTT-ATTGCC 717
Query 736 AAAGCTGGCAAAGCTCACTACGTGAAGTTCCACTGGAAACCAACTTGTGG-AGTCAAGTC 794
||| |||| |||| || || ||||||||||||||||||||||||||||| | |||||
Sbjct 718 AAATCTGGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCAACTTGTGGGA-TCAAGAA 776
Query 795 TCTTT-TGGAAGAAGATGCGATTCGT-GTTGGAGGAACCAACCACAGTCACGCGACTCAG 852
||| || | ||||| || | || ||||||||| |||| ||||| ||||| ||| ||
Sbjct 777 TCTGACTG-ATGAAGAGGCCAAG-GTTGTTGGAGGAGCCAATCACAGCCACGCCACTAAG 834
Query 853 GA-CTTGTATGACT-CAATTGC-TGCTGGAAACTACCCTGAATGGAAGCTCTTT-ATCCA 908
|| || | || | | ||||| | |||| |||||||| || ||||| || ||| |||||
Sbjct 835 GATCTCC-ACGA-TGCCATTGCAT-CTGGCAACTACCCCGAGTGGAAACT-TTTCATCCA 890
Query 909 AATCATTGATCCAGCTGATGAAGACAAGTTCGACTTTGACCCGCTCGATGTGACCAAGAC 968
| ||| ||||| || ||||| || ||||| ||||||||||| || |||||||||||||
Sbjct 891 GACCATGGATCCTGCAGATGAGGATAAGTTTGACTTTGACCCACTTGATGTGACCAAGAT 950
Query 969 CTGGCCTGAAGATATCTTACCTCTCCAACCTGTTGGTCG-TATGGTGT-TGAACAAGAAC 1026
||||||||| ||||| || ||||| ||||| |||||||| | |||| | |||||| || |
Sbjct 951 CTGGCCTGAGGATATTTTGCCTCTGCAACCGGTTGGTCGCT-TGGT-TCTGAACAGGACC 1008
Query 1027 ATTGACAACTTCTTTGCAGA-GAA--TGAGCAACTTGCCTTCTGCCCTGCAATCAT-TG- 1081
|||||||| ||||| || | ||| |||||| ||||| ||| ||| | || | ||
Sbjct 1009 ATTGACAATTTCTT--CA-ATGAAACTGAGCAGCTTGCGTTCAACCCGGG--TCTTGTGG 1063
Query 1082 TTCCCGGGATAC-ACTACTCAGACGACAAGCTGCTTCAAACCCGTG-TCTTCTCCT-ATG 1138
|||| || || | |||||||||||||||||||||| || | | |||| | || |||
Sbjct 1064 TTCCTGGAAT-CTACTACTCAGACGACAAGCTGCTCCAGTGTAG-GATCTT-TGCTTATG 1120
Query 1139 CCGACACTCAGAGACACCGTCTTGGACCAAACTACCTT-CAGCTACCAGTCAATGC-CCC 1196
|||||||||||||| || |||||||| || || || ||||| ||||||||||| |||
Sbjct 1121 GTGACACTCAGAGACATCGCCTTGGACCGAATTAT-TTGCAGCTTCCAGTCAATGCTCCC 1179
Query 1197 AAAATGTGCTCACCACAACAACCACCATGAGGGATTCATGAATTTCATGCACAGGGACGA 1256
||| ||||||||||||||||| |||||||| || || ||||| ||||||||||| || ||
Sbjct 1180 AAA-TGTGCTCACCACAACAATCACCATGAAGGTTTTATGAACTTCATGCACAGAGATGA 1238
Query 1257 GGAGGTCAATTACTTCCCATCAAGGTATGA-CCAGGTTCGTCATGC--TGAGAA-GTATC 1312
|||| ||||||||| ||| |||| || ||| || | | || | ||| |||||| || ||
Sbjct 1239 GGAGATCAATTACTACCCCTCAAAGTTTGATCCTG-TCCG-C-TGCGCTGAGAAAGT-TC 1294
Query 1313 CAACTCCGCCTG-CTGTCTGCTCTGGAAAACGTG-AGAGGTGCATTATTGAGAAAGAGAA 1370
| || || | || || | |||||| || | || ||| | || ||||||||||
Sbjct 1295 CCACCCCTACAAACTC-CTACACTGGAATTCGAACAAAG-TGCGTCATCAAGAAAGAGAA 1352
Query 1371 CAACTTCAAGGAGCCTGGAGAGAGATACCGTTCATTTACACCAGAGAGGCAAGA-ACGCT 1429
||||||||| || ||||||| || ||| | |||| ||||||| |||||||| | | |
Sbjct 1353 CAACTTCAAACAGGCTGGAGACAGGTACAGATCATGGGCACCAGACAGGCAAGACAGGTT 1412
Query 1430 TCATCCAGAGATGGATTGA-AGCCTTATCCGACCCTCG-CATCACGCATGAAATCCGCAG 1487
| | |||||||| | || | || ||| || || || | |||| || || |||||| |
Sbjct 1413 TGTTA-AGAGATGGGTGGAGATTCT-ATCGGAGCCACGTC-TCACCCACGAGATCCGCGG 1469
Query 1488 CATCTGGATCTCTTACTGGTCTCAGGCTGA-CAAGTCTCT-GGGACAGAAGCTGGCAAGC 1545
|||||||||||||||||||||||||||||| | | || || ||||||||| || ||||||
Sbjct 1470 CATCTGGATCTCTTACTGGTCTCAGGCTGATCGA-TC-CTTGGGACAGAAACTTGCAAGC 1527
Query 1546 CGTCTCAACGTGAGACCAAGCATCTA 1571
||||| |||||||| |||||||||||
Sbjct 1528 CGTCTGAACGTGAGGCCAAGCATCTA 1553
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 95029631685
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5