BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491162
Length=1914
Score E
Sequences producing significant alignments: (Bits) Value
AT4G34950.1 | Symbols: | Major facilitator superfamily protein... 2839 0.0
AT2G16660.1 | Symbols: | Major facilitator superfamily protein... 616 3e-175
> AT4G34950.1 | Symbols: | Major facilitator superfamily protein
| chr4:16642316-16644818 REVERSE LENGTH=1991
Length=1991
Score = 2839 bits (1537), Expect = 0.0
Identities = 1744/1846 (94%), Gaps = 5/1846 (0%)
Strand=Plus/Plus
Query 1 AAAAATAtcttctttcttcttcttcttcattcttctcaatatctcc-aatggggtttggt 59
||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||
Sbjct 12 AAAAATATCTTCTTTCTCCTTCTTCTTCATTCTTCTCAATATCTCCTAATGGGTTTTGGT 71
Query 60 agatcttcttcttcatcttcttcCTCAGCTCTAAAATGGCTAGGTTTCGTTACTGCCGTT 119
| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 72 ACATCTTCTTCTTCATCTTCTTCCTCAGCTCTGAAATGGCTAGGTTTCGTTACTGCCGTT 131
Query 120 TGGGTCCAATCCATCTCCGGCAACAATTACACCTTCTCAAATTACTCCGGCGCACTCAAA 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 132 TGGGTCCAATCCATCTCCGGCAACAATTACACCTTCTCAAATTACTCCGGCGCACTCAAA 191
Query 180 TCCCTAATGAACCTCACTCAGCTAGAACTCAACAGTCTTTCCGTCGCTAAAGACATCGGA 239
||| ||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||
Sbjct 192 TCCTTAATGAACCTCACTCAGTTAGAACTCAACAGTCTCTCCGTCGCTAAAGACGTCGGA 251
Query 240 AAAGCATTCGGAATCCTTGCCGGGCTTGCTTCCGATCGTCTTTCAACTCCGGTGATCCTT 299
||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||
Sbjct 252 AAAGCATTCGGAATCCTCGCCGGACTTGCTTCCGACCGTCTTTCAACTCCGGTGATCCTC 311
Query 300 CTCATCGGTTGTTTCGAAGGTCTTCTCGGTTATGGTGTACAATGGCTTGTCGTAAGCCGC 359
|||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 312 CTCATCGGTTCTTTCGAAGGTCTTCTTGGTTATGGTGTACAATGGCTTGTCGTTAGCCGC 371
Query 360 ACGATTCAACCTATACCTTATTGGCAGATGTGTGTGTTTCTCTGTATGGGAGGTAACAGT 419
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 372 ACGATTCAACCTATACCTTATTGGCAGATGTGTGTGTTTCTCTGTATGGGAGGAAACAGT 431
Query 420 ACTACGTGGATGAACACGGCGGTTCTGGTGACGTGTATACGAAACTTCCGGCGAAATCGT 479
|| |||||||||||||||||||||||||| || |||||| ||||||||||||||||||||
Sbjct 432 ACGACGTGGATGAACACGGCGGTTCTGGTTACTTGTATAAGAAACTTCCGGCGAAATCGT 491
Query 480 GGTCCTGTTTCAGGGATTCTTAAAGGATACGTTGGTTTAAGTACTGCGATTTTCACGGAT 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 492 GGTCCTGTTTCAGGGATTCTTAAAGGATACGTTGGTTTAAGTACTGCGATTTTCACGGAT 551
Query 540 CTCTGCACTGCTCTGTTTTCCTCTGACCCAGCTTCGTTTCTTATTCTTCTCTCCGTCGTG 599
|| || | |||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct 552 CTATGTAATGCTCTGTTTTCCTCTGACCCAGCTTCGTTTCTTGTCCTCCTCTCCGTCGTG 611
Query 600 CCTTTCGCTGTTTGTCTCACGGCGGTTTTCTTCCTCCGTGAAATCCCTCCGTCTACTACC 659
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 612 CCTTTTGCCGTTTGTCTCACGGCGGTTTTCTTCCTCCGTGAAATCCCTCCGTCTACTACC 671
Query 660 TCCGACGAGGATAACGAAGAGTCTAAATACTTCGCCGTGTTTAACATCGTTGCGGTTGTT 719
| || ||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 672 TTCGCCGAGGATAACGAAGAGTCTAAATACTTTGCTGTGTTTAACATCGTTGCGGTTGTT 731
Query 720 GTTGCTGTGTACCTTCAGTCTTACGACATCATCGGAATCAAAACCGGAGCTTTCTCTATC 779
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 732 GTTGCTGTGTACCTTCAGTCTTACGACATCATCGGAATCAAAACAGGAGCTTTCTCAATC 791
Query 780 GCGTTCGCTTCCATACTTCTCATTCTCTTAGCTTCTCCTATCGCTGTCCCATTCCATGCC 839
|| |||||||||||||||||||| |||||||| |||||| ||||||| || ||||| ||
Sbjct 792 GCATTCGCTTCCATACTTCTCATACTCTTAGCCTCTCCTGTCGCTGTACCTTTCCACGCT 851
Query 840 TTCATTCGGAGCAAAGATCACGATGAACAGGACGTAGAAGGACGAATCGACGAACCGTTA 899
|| || || ||||||| ||| ||||| || ||||||||||||||||| || ||||| |||
Sbjct 852 TTTATCCGTAGCAAAGTTCATGATGAGCAAGACGTAGAAGGACGAATAGATGAACCTTTA 911
Query 900 CTGAGATCAGGATCCGAGATTGAAGTGGAGGAAACAATCGTAGGTGCTGCAGCGGCGGCG 959
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 912 CTAAGATCAGGATCTGAGATTGAAGTGGAGGAAACAATCGTAGGTGCTGCAGCGGCGGCG 971
Query 960 GATAATGAATTGCCACCGTCGCTTGAGCCGTTAAATAACGAGGAGGTAGAGAATCACGGA 1019
||||| |||||||||||||| ||| ||||||||| ||||||||||| |||||||||||||
Sbjct 972 GATAACGAATTGCCACCGTCTCTTAAGCCGTTAAGTAACGAGGAGGAAGAGAATCACGGA 1031
Query 1020 AATGTGGTGACGACGGAGAAGAAAAGACCGGTTCTTGGAGAAGAACACACCATAATGGAA 1079
| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1032 ACTATAGTGACGACGGAGAAGAAAAGACCGGTTCTTGGAGAAGAACACACCATAATGGAA 1091
Query 1080 GCGATGTTGACCGTTGACTTTTGGGTGTTGTTTGTGTCGTTCTTGTGTGGAGTAGGAACT 1139
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1092 GCTATGTTGACCGTTGACTTTTGGGTGTTGTTCGTGTCGTTCTTGTGTGGAGTAGGAACT 1151
Query 1140 GGTTTAGCAGTTATGAACAATATGGGTCAGATCGGGCTTGCGCTTGGTTACACTGACGTC 1199
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1152 GGTTTAGCAGTTATGAACAATATGGGTCAGATCGGGCTTGCGCTTGGTTACACTGATGTC 1211
Query 1200 TCCATTTTTGTATCAATGACTAGCATTTGGGGATTCTTTGGTCGGATTCTCTCCGGTACT 1259
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1212 TCCATTTTTGTCTCCATGACTAGCATTTGGGGATTCTTTGGTCGGATTCTCTCCGGTACT 1271
Query 1260 ATCTCCGAGCACTTCATCAAAAAAGCTGGAACACCAAGACCATTATGGAATGCAGCAGCT 1319
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1272 ATCTCCGAGCACTTCATCAAGAAAGCTGGAACACCAAGACCATTATGGAATGCAGCAGCT 1331
Query 1320 CAGATCATTATGGCTGTCGGATATCTACTGATGGCTTTAGCCATGCCCGGTTCACTCTAC 1379
|| ||||||||||| || |||||||||||||||||||||||| ||||||||||||||||
Sbjct 1332 CAAATCATTATGGCCGTGGGATATCTACTGATGGCTTTAGCCTTGCCCGGTTCACTCTAT 1391
Query 1380 ATTGGTTCAATGGTGGTTGGGGTATGCTATGGAGT-CAGATTAGCCATAACCGTACCAAC 1438
||||||||||||||||||||||||||||||||||| | | ||||| ||||||||||||||
Sbjct 1392 ATTGGTTCAATGGTGGTTGGGGTATGCTATGGAGTTCGG-TTAGCGATAACCGTACCAAC 1450
Query 1439 AGCATCAGAACTCTTCGGTCTCAAATACTATGGACTCATCTACAACATCCTTGTACTTAA 1498
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1451 AGCATCAGAACTCTTCGGTCTCAAATACTATGGACTCATCTACAACATCCTTATACTTAA 1510
Query 1499 TTTGCCTCTAGGATCGTTCCTCTTCTCGGGTCTACTTGCGGGTTTACTCTACGATGCTGA 1558
| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1511 TATGCCTCTAGGATCGTTCCTCTTCTCGGGTCTACTCGCGGGTTTACTCTACGATGCTGA 1570
Query 1559 AGCCACACCAACTCCTGGTGGAGGCAATACGTGTGTAGGAGCTCATTGTTTCCGTATGGT 1618
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1571 AGCCACACCTACTCCTGGTGGAGGCAATACGTGTGTAGGAGCTCATTGTTTCCGTATCGT 1630
Query 1619 CTTCATTGTAATGGCGTTTACTTCCATTATTGGAGTCGGTCTTGACCTTTTGCTTGCGTT 1678
||||||||||||||||||| |||| || ||||| |||||||||||||||||||||||||
Sbjct 1631 CTTCATTGTAATGGCGTTTGCTTCTATCATTGGGGTCGGTCTTGACCTTTTGCTTGCGTA 1690
Query 1679 TAGAACAAAGGGAATCTATGCGAAGATTCATGCGAGCAAGAAGGGTAATAAATCTACTGG 1738
|||||| ||||| |||||||||||||||||||||||||||||| ||| |||||| |||
Sbjct 1691 TAGAACCAAGGGGATCTATGCGAAGATTCATGCGAGCAAGAAGACTAAGAAATCTGGTGG 1750
Query 1739 TAATCTTCGATGAGAGTGGATTT-GCTTTTGGTGACAATCATTTTTTGGGTATCTTTAGT 1797
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 1751 TAATCTTCGATGAGAGTGGATTTTGCTTTTGGTGAAAATCATTTTTTGGGTATCTTTAGT 1810
Query 1798 TCTATAGTAA-ACGTAGATTTGTTGTGTCTATTTTCCAAAGCATTT 1842
|||||||||| | |||||||| |||||||||||||| |||| ||||
Sbjct 1811 TCTATAGTAATATGTAGATTTCTTGTGTCTATTTTCGAAAGAATTT 1856
> AT2G16660.1 | Symbols: | Major facilitator superfamily protein
| chr2:7218706-7221625 REVERSE LENGTH=1898
Length=1898
Score = 616 bits (333), Expect = 3e-175
Identities = 686/853 (80%), Gaps = 37/853 (4%)
Strand=Plus/Plus
Query 75 tcttcttcCTCAGC-TCTAAAATGGCTAGG-TTTCGTTACTGCCGTTTGGGTCCAATCCA 132
|||||||| || || | |||||||||| || ||| || || || |||||||| |||||||
Sbjct 55 TCTTCTTCTTCTGCAT-TAAAATGGCTTGGATTT-GTAACAGCGGTTTGGGTTCAATCCA 112
Query 133 TCTCCGGCAACAATTACACCTTCTCAAATTACTCCGGCGCACTCAAATCCCTAATGAACC 192
||||||||||||| ||||| || ||||| |||||||| || || || || || ||||| |
Sbjct 113 TCTCCGGCAACAACTACACTTTTTCAAACTACTCCGGTGCTCTTAAGTCTCTCATGAATC 172
Query 193 TC-ACTCAGCTAGAACTCAACAGTCTTTCCGTCGCTAAAGACATCGGAAAAGCATTCGGA 251
|| || ||||| || ||||||| || || |||||||||||| |||||||||| || ||
Sbjct 173 TCAAC-CAGCTCGAGCTCAACAACCTCTCTGTCGCTAAAGACGTCGGAAAAGCCTTTGGG 231
Query 252 ATCCTTGCCGGGCTTGCTTCCGATCGTCTTTCAACTCCGGTGATCCTTCTCATCGGTTG- 310
||||| || || ||||| || || |||||| | |||||||| ||||| || || |||||
Sbjct 232 ATCCTGGCTGGCCTTGCCTCTGACCGTCTTCCCACTCCGGTCATCCTCCTTATTGGTTGC 291
Query 311 TTTCGAAGGTCTTCTCGGTTATGGTGTACAATGGCTTGTCGTAAGCCGCACGATTCAACC 370
||| ||||||||||| |||||||||||||||||||| || || |||||||| || |||||
Sbjct 292 TTT-GAAGGTCTTCTTGGTTATGGTGTACAATGGCTCGTTGTTAGCCGCACCATCCAACC 350
Query 371 TATACCTTATTGGCAGATGTGTGTGTTTCTCTGTATGGGAGGTAACAGTACTACGTGGAT 430
|| |||||||||||||||||| | || |||||||||||||| ||||| || ||||||||
Sbjct 351 AATCCCTTATTGGCAGATGTGTATATTCCTCTGTATGGGAGGGAACAGCACAACGTGGAT 410
Query 431 GAACACGGCGGTTCTGGTGACGTGTATACGAAACTTCCGGCGAAATCGTGGTCCTGTTTC 490
||||||||||||||| ||||| || ||||| || || || ||||| |||||||| || ||
Sbjct 411 GAACACGGCGGTTCTAGTGACTTGCATACGCAATTTTCGACGAAACCGTGGTCCGGTCTC 470
Query 491 AGGGATTCTT-AAAGGATACGTTGGTTTAAGTACTGCGATTTTCACGGATCTCTGCACTG 549
|||| | || |||||||| || |||||||| || || || ||||| |||||||| ||||
Sbjct 471 CGGGA-TATTGAAAGGATATGTCGGTTTAAGCACAGCTATATTCACTGATCTCTGTACTG 529
Query 550 CTCTGTTTTC-CTCTGACCCAGCTTCGTTTCTT-ATTCTT-CTCTCCGTCGTGCCTTTCG 606
||||||| || | || || || |||||| || || || || |||| |||||||| |
Sbjct 530 CTCTGTTCTCAAAC-GATCCGGCGTCGTTT-TTGGTT-TTACTAGCCGTGGTGCCTTTTG 586
Query 607 CTGTTTGTCTCACGGCGGTTTTCTTCCTCCGTGAAATCCCTCC-GTC-TACTACCTCCGA 664
| || ||||||||||||||||||||||||||||| ||||| || | | | || || | |
Sbjct 587 CCGTATGTCTCACGGCGGTTTTCTTCCTCCGTGAGATCCCACCAG-CAT-CTTCCGCAG- 643
Query 665 C-GAGGATAACGAAGAGTCTAAATACTTCGCCGTGTTTAACATCGTTGCGGTTGTTGTTG 723
| ||||| ||||||||| || ||||| || | || ||||| || || |||||||| |
Sbjct 644 CTGAGGAGAACGAAGAGACTCGTTACTTTACCATATTCAACATTGTGGCCGTTGTTGTCG 703
Query 724 CTGTGTACCTTCAGTCTTACGACATCATCGGAATCAAAACCGGAGCT-TTCTCTATCGCG 782
| ||||| |||||||||||||||||||| ||||||||||| |||| | |||||| ||||
Sbjct 704 CCGTGTATCTTCAGTCTTACGACATCATTGGAATCAAAACTGGAG-TGTTCTCTGTCGCT 762
Query 783 TTCGCTTCCATACTTCTCATTC-TCTTAGCTTCTCCTATCGCTGTCCCATTCCA-TGCCT 840
|||||||| ||||||||| ||| |||| |||||||| || || | || ||||| | |||
Sbjct 763 TTCGCTTCTATACTTCTC-TTCCTCTTGGCTTCTCCAATAGCCATTCCTTTCCACT-CCT 820
Query 841 TCATTCG-GAGCAAAGATC-ACGATGAACA-G--GACGTAGAAGGACGAAT-CGACGAAC 894
|||| | |||| || | ||| |||||| | ||| |||||||||| || | | ||||
Sbjct 821 TCAT-CAAGAGCTT-GAACTACGGTGAACAAGATGACTTAGAAGGACGGATTCAA-GAAC 877
Query 895 CGTTACTGAGATC 907
|||| || |||||
Sbjct 878 CGTTGCTTAGATC 890
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 94778628960
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5