BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491172 Length=1330 Score E Sequences producing significant alignments: (Bits) Value AT4G34850.1 | Symbols: LAP5 | Chalcone and stilbene synthase fa... 2128 0.0 AT4G34860.1 | Symbols: | Plant neutral invertase family protei... 119 8e-26 > AT4G34850.1 | Symbols: LAP5 | Chalcone and stilbene synthase family protein | chr4:16608313-16609829 FORWARD LENGTH=1324 Length=1324 Score = 2128 bits (1152), Expect = 0.0 Identities = 1273/1330 (96%), Gaps = 14/1330 (1%) Strand=Plus/Plus Query 1 AGACCCAAGATTTGAGTCTTTGACAAGAGAAAACATATAGAAATGGGAAGCATCGATGCC 60 |||||||||||||||||| || | | | ||||| ||| ||||||||||||||||||| Sbjct 1 AGACCCAAGATTTGAGTC-TT--C-A-A-CAAACAGATACAAATGGGAAGCATCGATGCT 54 Query 61 GAAGTATTGGGTTCAGAGAAGAAATCAAACCCGGGAAAAGCGACAATTCTTGCTCTCGGA 120 | ||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 55 GCAGTGTTGGGTTCAGAGAAGAAATCAAACCCGGGAAAAGCCACAATTCTTGCTCTGGGA 114 Query 121 AAAGCCTTTCCTCACCAGCTAGTAATGCAAGAGTACTTAGTCGATGGCTACTTCAAAACC 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 115 AAAGCCTTTCCTCACCAGCTAGTAATGCAAGAGTACTTAGTCGATGGCTACTTCAAAACC 174 Query 181 ACCAAGTGTGATGACCCTGAACTCAAACAGAAGCTTACTCGTCTCTGCAAGACAACAACG 240 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 175 ACCAAGTGTGATGACCCTGAACTCAAACAGAAACTTACTCGTCTCTGCAAGACAACAACG 234 Query 241 GTGAAGACAAGGTATGTTGTGATGTCGGAGGAGATTCTCAAGAAGTATCCAGAACTTGCC 300 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct 235 GTGAAGACAAGGTATGTTGTGATGTCAGAGGAGATTCTCAAGAAGTACCCAGAACTTGCC 294 Query 301 ATTGAAGGAGGATCCACAGTGACGCAGCGTCTAGACATCTGCAACGATGCAGTGACCGAG 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 295 ATTGAAGGAGGATCCACAGTGACGCAGCGTCTAGACATCTGCAACGATGCAGTGACCGAG 354 Query 361 ATGGCAGTAGAAGCCTCCAGAGCATGCATCAAGAACTGGGGGCGTTCTATTTCGGAAATA 420 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || ||| Sbjct 355 ATGGCAGTAGAAGCCTCCAGAGCCTGCATCAAGAACTGGGGACGTTCTATTTCCGACATA 414 Query 421 ACTCACCTTGTCTATGTCTCCTCAAGCGAAGCTCGTCTTCCTGGTGGGGACTTGTACTTA 480 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 415 ACTCACGTTGTCTATGTCTCCTCAAGCGAAGCTCGTCTTCCTGGTGGGGACTTGTACCTG 474 Query 481 GCCAAGGGGCTTGGACTCAGTCCTGACACACACCGTGTTCTGCTCTACTTCGTCGGCTGT 540 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 475 GCCAAGGGGCTTGGACTCAGTCCTGACACACACCGTGTTCTGCTCTACTTTGTTGGCTGT 534 Query 541 TCTGGTGGCGTTGCAGGTCTCCGTGTAGCCAAAGACATAGCCGAGAATAATCCGGGCAGT 600 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 535 TCTGGTGGCGTTGCAGGTCTCCGTGTAGCCAAAGACATCGCCGAGAATAATCCGGGCAGT 594 Query 601 AGAGTTTTGCTTGCCACGTCCGAGACAACCATCATTGGGTTCAAACCCCCAAGTGTGGAT 660 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 595 AGAGTTTTGCTTGCCACGTCTGAGACAACCATCATTGGGTTCAAGCCCCCAAGTGTGGAT 654 Query 661 AGACCGTATGATCTTGTTGGGGTGGCGTTGTTTGGTGATGGAGCCGGAGCTATGATCGTC 720 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct 655 AGACCGTATGATCTTGTTGGGGTCGCGTTGTTTGGTGATGGAGCCGGAGCTATGATCATT 714 Query 721 GGATCCGATCCAGACCCGATCTGCGAGAAGCCTCTCTTTGAGCTTCACACTGCAATACAG 780 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 715 GGATCCGATCCAGACCCGATCTGCGAGAAGCCTCTCTTTGAGCTTCATACTGCAATACAG 774 Query 781 AATTTTTTACCTGACACAGAGAAGACAATAGATGGAAGGCTAACAGAACAAGGGATAAAC 840 || ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 775 AACTTTTTACCTGAAACAGAGAAGACGATAGATGGAAGGCTAACAGAACAAGGGATAAAC 834 Query 841 TTCAAGCTAGCGAGAGAGCTTCCACAGATAATAGAAGACAACGTGGAGAATTTCTGCAAG 900 ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 835 TTCAAGCTATCGAGAGAGCTTCCACAGATAATAGAAGACAATGTGGAGAATTTCTGCAAG 894 Query 901 AAGCTAATAGGAAAAGCGGGACTGGCTCATAAGAACTATAACCAGATGTTCTGGGCGGTT 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 895 AAGCTAATAGGAAAAGCGGGACTGGCTCATAAGAACTATAACCAGATGTTCTGGGCGGTT 954 Query 961 CATCCAGGTGGACCAGCCATTTTGAATCGGATGGAAAAGCGGCTTAACCTGTCGCCTGAG 1020 |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| Sbjct 955 CATCCAGGTGGACCAGCCATCTTGAACCGGATTGAAAAGCGGCTTAACCTGTCGCCTGAG 1014 Query 1021 AAGCTGAGTCCAAGCAGAAGAGCTCTCATGGACTATGGCAATGCGAGCAGCAATTCAATT 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1015 AAGCTGAGTCCAAGCAGAAGAGCTCTCATGGACTATGGCAATGCGAGCAGCAATTCAATT 1074 Query 1081 GTTTATGTGTTGGAGTATATGTTGGAGGAGAGCAAGAAAGTGAGGAACATGAATGAAGAA 1140 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1075 GTTTATGTGCTGGAGTATATGTTGGAGGAGAGCAAGAAAGTGAGGAACATGAATGAAGAA 1134 Query 1141 GAAAACGAGTGGGGTCTGATTCTGGCTTTTGGACCTGGTGTTACATTTGAAGGCATCATC 1200 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 1135 GAAAACGAGTGGGGTCTGATTCTTGCTTTTGGACCTGGTGTTACATTTGAAGGCATTATC 1194 Query 1201 GCTAGAAACCTTGATGTCTGAACAATAAAGTGAAAGGTTTACCTTGCAGATCAAGAAAGA 1260 ||| |||||||||||||||||||||||| || ||||||||||||||| ||||||| Sbjct 1195 GCTCGAAACCTTGATGTCTGAACAATAA-GTT-----TTTACCTTGCAGATCGAGAAAGA 1248 Query 1261 ACCCCTTCTTTGCTATAATAAAGACATGAAGCTAAACATACGAAATATTTTTTACGATGC 1320 ||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1249 ACCCCTTAT--GCTTTAATAAAGACATGAAGCTAAACATACGAAATATTTTTTACGATGC 1306 Query 1321 TTAAATCTTT 1330 |||||||||| Sbjct 1307 TTAAATCTTT 1316 > AT4G34860.1 | Symbols: | Plant neutral invertase family protein | chr4:16609746-16612907 REVERSE LENGTH=2330 Length=2330 Score = 119 bits (64), Expect = 8e-26 Identities = 73/77 (95%), Gaps = 2/77 (3%) Strand=Plus/Minus Query 1254 AGAAAGAACCCCTTCTTTGCTATAATAAAGACATGAAGCTAAACATACGAAATATTTTTT 1313 |||||||||||| | | |||| |||||||||||||||||||||||||||||||||||||| Sbjct 2329 AGAAAGAACCCC-T-TATGCTTTAATAAAGACATGAAGCTAAACATACGAAATATTTTTT 2272 Query 1314 ACGATGCTTAAATCTTT 1330 ||||||||||||||||| Sbjct 2271 ACGATGCTTAAATCTTT 2255 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 65461510680 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5