BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491309 Length=539 Score E Sequences producing significant alignments: (Bits) Value AT4G33710.1 | Symbols: | CAP (Cysteine-rich secretory proteins... 808 0.0 AT5G26130.1 | Symbols: | CAP (Cysteine-rich secretory proteins... 571 2e-162 > AT4G33710.1 | Symbols: | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein | chr4:16181012-16181776 FORWARD LENGTH=765 Length=765 Score = 808 bits (437), Expect = 0.0 Identities = 506/540 (94%), Gaps = 2/540 (0%) Strand=Plus/Plus Query 1 AAAAATGAAGATGTTTAACTCTCCTCAAACCCTAGTACTATTGGCGTTAGCTCTTGTCCT 60 ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| Sbjct 50 AAAAATGAAGATGTTTATCTCTCCTCAAACCCTAGTACTATTGGCATTAGCTCTTGTCCT 109 Query 61 AGCTTTTGCAGTTCCACTGAAAGCCCAAGACGGGCCAAAAGACTACCTCGCTGTACACAA 120 ||||||||||||||||||||||||||||||| ||| | |||||||||| | ||||||||| Sbjct 110 AGCTTTTGCAGTTCCACTGAAAGCCCAAGACCGGCGACAAGACTACCTTGATGTACACAA 169 Query 121 CCGTGCTCGAGACCACGTTGGTGTGCCTCATATAAAATGGCATGCGGGGGCGGCGCGATA 180 || |||||||||| ||||| |||||||||||||||||||||||||||| || || ||||| Sbjct 170 CCATGCTCGAGACGACGTTAGTGTGCCTCATATAAAATGGCATGCGGGAGCAGCCCGATA 229 Query 181 CGCCTGGAACTATGCTCAAATAAGAAAGCGGGACTGTCGTCTCAAACACTCAAACTCACG 240 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct 230 CGCCTGGAACTATGCTCAAAGAAGAAAGCGGGACTGTCGTCTCATTCACTCAAACTCACG 289 Query 241 CGGGCGGTACGGTGAAAACTTGGCATGGAGCAGTGGTGATATGTCCGGAGCTGCCGCAGT 300 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 290 CGGACGTTACGGTGAAAACTTGGCATGGAGCAGTGGTGATATGTCCGGAGCTGCCGCAGT 349 Query 301 GAGATTGTGGGTCAAAGAGAAGTCTGACTACTTCCACAAATCGAACACATGTCGTGCTGG 360 |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct 350 GAGATTGTGGGTCAGGGAGAAGTCTGACTACTTCCACAAATCGAACACATGCCGTGCTGG 409 Query 361 AAAACAATGTGGTCATTATACTCAGGTTGTGTGGAAAAACTCGGAGTGGGTTGGGTGTGC 420 |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| Sbjct 410 AAAACAATGTGGTCATTATACTCAAGTTGTGTGGAAAAACTCAGAGTGGGTTGGATGTGC 469 Query 421 CAAAGTCAAGTGTGACAATGGTGGAACCTTTGTGACTTGCAACTATTTTCCTCCTGGTAA 480 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 470 CAAAGTCAAGTGTGACAATGGTGGAACCTTTGTGACTTGCAACTATTCTCATCCTGGTAA 529 Query 481 TATTAGGGGCCGTTGGCCTTACTAAGTGTATGTGTACGCTGACGAATA-AAACTTGTCCA 539 | ||||||| ||| ||||||||||| | ||||||||||| |||||| | ||||||||||| Sbjct 530 TGTTAGGGGACGTAGGCCTTACTAACTATATGTGTACGCAGACGAA-AGAAACTTGTCCA 588 > AT5G26130.1 | Symbols: | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein | chr5:9128110-9128610 REVERSE LENGTH=501 Length=501 Score = 571 bits (309), Expect = 2e-162 Identities = 444/508 (87%), Gaps = 14/508 (3%) Strand=Plus/Plus Query 5 ATGAAGATGTTTAACTCTCCTCAAACCCTAGTACTATT-GGCGT-TAGCTCTTGTCCTAG 62 |||||||||||||| ||||||||||| ||| |||| || || | ||| |||| |||||| Sbjct 1 ATGAAGATGTTTAAATCTCCTCAAACACTAATACT-TTCGG-TTATAGTTCTTTTCCTAG 58 Query 63 CTTTTGCAGTTCCACTGAAAGCCCAAGACGGGCCAAAAGACTACCTCGCTGTACACAACC 122 ||||||||||||| ||||||||||||||| |||| |||||||||||| || |||||||| Sbjct 59 CTTTTGCAGTTCCTCTGAAAGCCCAAGACCAGCCACAAGACTACCTCGATGAACACAACC 118 Query 123 GTGCTCGAGA-CCACGTTGGTGTGCCTCATATAAAATGGCATGCGGGGGCGGCGCGATAC 181 |||||||| | ||| ||||||||||||| ||| ||||||||||||||||||| || |||| Sbjct 119 GTGCTCGA-ACCCAAGTTGGTGTGCCTCCTATGAAATGGCATGCGGGGGCGGAGCAATAC 177 Query 182 GCCTGGAACTATGCTCAA-ATAAGAAAGCGG-GACTGTCGTCTCAAACACTCAAACTCAC 239 |||||||||||||||||| | ||||||| || |||||| |||||| ||||| |||||| Sbjct 178 GCCTGGAACTATGCTCAACA-AAGAAAG-GGAGACTGTAGTCTCACTCACTCCAACTCAA 235 Query 240 GCGGGCGGTACGGTGAAAACTTGGCATGGAGCAGTGGTGATATGTCCGGAGCTGCCGCAG 299 |||| |||||||||||||||||||||||| | |||| | |||| ||||||| |||| Sbjct 236 ATGGGCTTTACGGTGAAAACTTGGCATGGAGCGGAGGTGCTTTGTCTGGAGCTGAGGCAG 295 Query 300 TGAGATTGTGGGTCAAAGAGAAGTCTGACTACT-TCCACAAATCGAACACATGTCGTGCT 358 ||| |||||||||||| |||||||||||||| | || || |||||||| ||| ||| | Sbjct 296 TGAAATTGTGGGTCAACGAGAAGTCTGACTA-TATCTACGCTTCGAACACTTGTAGTGAT 354 Query 359 GGAAAACAATGTGGTCATTATACTCAGGTTGTGTGGAAAAACTCGGAGTGGGTTGGGTGT 418 |||||||||||||||||||| ||||| ||||||||| || ||||||||||||||||||| Sbjct 355 GGAAAACAATGTGGTCATTACACTCAAGTTGTGTGGCGAACCTCGGAGTGGGTTGGGTGT 414 Query 419 GCCAAAGTCAAGTGTGACAATGGTGGAACCTTTGTGACTTGCAACTATTTTCCTCCTGGT 478 |||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct 415 GCCAAAGTAAAGTGTGACAATGGTGGAACCTTTGTGACTTGCAACTATTATCCACCTGGT 474 Query 479 AAT-ATTAGGGGCCGTTGGCCTTACTAA 505 ||| || ||||||||||||||||||||| Sbjct 475 AATTAT-AGGGGCCGTTGGCCTTACTAA 501 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 25820351558 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5