BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491335
Length=1727
Score E
Sequences producing significant alignments: (Bits) Value
AT4G33510.1 | Symbols: DHS2 | 3-deoxy-d-arabino-heptulosonate 7... 2536 0.0
AT1G22410.1 | Symbols: | Class-II DAHP synthetase family prote... 802 0.0
AT4G39980.1 | Symbols: DHS1 | 3-deoxy-D-arabino-heptulosonate 7... 795 0.0
> AT4G33510.1 | Symbols: DHS2 | 3-deoxy-d-arabino-heptulosonate
7-phosphate synthase | chr4:16116447-16118797 FORWARD LENGTH=1821
Length=1821
Score = 2536 bits (1373), Expect = 0.0
Identities = 1529/1604 (95%), Gaps = 11/1604 (1%)
Strand=Plus/Plus
Query 1 GAACTAGTCGTCAATCAAAATCCCAAAG--CA---ATGGTGACTCTAAACGCTTCTTCTC 55
|||||||||||||||| ||||||||||| || |||||||||||||||||||||||||
Sbjct 15 GAACTAGTCGTCAATCGAAATCCCAAAGATCAGCGATGGTGACTCTAAACGCTTCTTCTC 74
Query 56 CTCTCACGACCAAGTCATTCCTCCCCTACCGTCACGCTCCTCGCCGTCCGATCTCTTTCT 115
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 75 CTCTCACGACCAAGTCGTTCCTCCCCTACCGTCACGCTCCTCGCCGTCCAATCTCTTTCT 134
Query 116 CCCCTGTTTTCGCCGTTCATTCGACTGACCCCAAGAAATCTACCCAATCAGCCTCCGCTT 175
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 135 CCCCTGTCTTCGCCGTTCATTCGACTGACCCCAAGAAATCTACCCAATCAGCCTCCGCTT 194
Query 176 CGGCTGAATGGAGTATAGACAGTTGGAAATCGATGAAAGCTTTGCAATTGCCGGCGTATC 235
||| | |||||||| |||| |||||||| |||| |||||||||||||||||||| ||||
Sbjct 195 CGGTTAAATGGAGTCTAGAGAGTTGGAAGTCGAAGAAAGCTTTGCAATTGCCGGATTATC 254
Query 236 CTGACCAGAAGGATCTCGATTCGGTTCTACAGACGCTTTCTTCTTTCCCTCCTATAGTTT 295
|||| ||||||||| | ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 255 CTGATCAGAAGGATGTTGATTCGGTTCTACAGACGCTTTCTTCTTTTCCTCCTATAGTTT 314
Query 296 TCGCTGGTGAGGCGAGGAAACTAGAGGATAAGCTTGGTCAAGCGGCCATGGGTCAGGCCT 355
||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 315 TCGCTGGTGAGGCTAGGAAACTAGAGGATAAGCTTGGTCAAGCGGCTATGGGTCAAGCCT 374
Query 356 TTATGCTTCAAGGTGGTGATTGTGCTGAGAGTTTCAAGGAATTTAACGCTAATAACATTA 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 375 TTATGCTTCAAGGTGGTGATTGTGCTGAGAGTTTCAAGGAATTTAACGCTAATAACATTA 434
Query 416 GAGATACCTTCAGGGTTCTTCTTCAGATGGGTGTTGTTCTCATGTTCGGTGGCCAGTTAC 475
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 435 GAGACACCTTTAGGGTTCTTCTTCAGATGGGTGTTGTTCTCATGTTCGGTGGCCAGTTAC 494
Query 476 CAGTTATCAAGGTGGGAAGAATGGCTGGTCAGTTTGCCAAGCCGAGATCGGACCCATTTG 535
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 495 CAGTTATCAAGGTGGGAAGAATGGCTGGTCAGTTTGCGAAGCCGAGATCAGACCCATTTG 554
Query 536 AGGAGAAAGATGGTGTGAAGCTGCCGAGTTACAGAGGAGATAACATAAATGGTGATGCTT 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 555 AGGAGAAAGATGGTGTGAAGCTGCCGAGTTACAGAGGAGATAACATAAATGGTGATGCTT 614
Query 596 TTGATGAGAAATCCAGGATTCCTGATCCTCATAGGATGGTTAGAGCCTACACACAATCTG 655
||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 615 TTGATGAGAAATCGAGGATTCCTGATCCTCATAGGATGGTTAGAGCGTACACACAGTCTG 674
Query 656 TGGCTACGTTGAATCTCTTGAGAGCATTTGCTACTGGAGGTTATGCAGCTATGCAAAGAG 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 675 TGGCTACGTTGAATCTCTTGAGAGCATTTGCTACTGGAGGTTATGCAGCTATGCAGAGAG 734
Query 716 TTAGCCAGTGGAATCTTGATTTCACCCAACATAGTGAACAGGGTGACAGGTACCGTGAAT 775
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 735 TTAGCCAGTGGAACCTTGATTTCACGCAACATAGTGAACAGGGTGACAGGTACCGTGAAT 794
Query 776 TGGCTAATAGAGTTGATGAGGCTTTAGGATTCATGGGTGCAGCTGGACTTACCAATGCAC 835
||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||| |
Sbjct 795 TGGCTAATAGAGTTGATGAGGCTTTGGGATTCATGGGTGCAGCTGGACTTACTAGTGCTC 854
Query 836 ACCCCATCATGACTACTACTGAGTTTTGGACTTCCCATGAGTGTTTGTTACTGCCTTATG 895
|||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct 855 ACCCGATCATGACTACTACTGAGTTTTGGACATCCCATGAGTGTTTGTTATTGCCTTATG 914
Query 896 AGCAAGCACTCACAAGAGAGGATTCCACATCTGGACTTTACTATGATTGCTCTGCGCACA 955
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 915 AGCAAGCACTCACAAGAGAGGATTCAACATCTGGACTTTACTATGATTGCTCTGCGCACA 974
Query 956 TGCTTTGGGTTGGAGAGCGAACTCGCCAACTCGATGGTGCCCATGTTGAGTTTCTGAGAG 1015
|||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| |
Sbjct 975 TGCTTTGGGTTGGAGAACGAACTCGCCAACTTGATGGTGCTCATGTTGAGTTTCTGAGGG 1034
Query 1016 GAATCGCTAACCCCCTTGGAATCAAGGTGAGTGATAAAATGGTCCCTAGTGAACTGGTTA 1075
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035 GAATCGCTAACCCCCTCGGAATCAAGGTGAGTGATAAAATGGTCCCTAGTGAACTGGTTA 1094
Query 1076 GGCTGATAGAGATACTAAACCCTCAGAACAAGCCTGGAAGGATTACAGTTATTGTGAGAA 1135
||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 1095 AGCTGATAGAGATACTAAACCCTCAGAACAAGCCTGGAAGGATTACGGTTATAGTGAGAA 1154
Query 1136 TGGGAGCTGAGAATATGCGGGTTAAGCTTCCTAATTTGATCAGAGCAGTACGAGGAGCCG 1195
|||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||
Sbjct 1155 TGGGAGCTGAGAATATGCGGGTCAAGCTTCCTAATTTGATCAGAGCAGTCCGTGGAGCCG 1214
Query 1196 GTCAGATAGTGACTTGGGTTAGTGATCCAATGCATGGAAACACAATCATGGCTCCTGGTG 1255
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1215 GTCAGATTGTGACTTGGGTTAGTGATCCAATGCACGGAAACACAATCATGGCTCCTGGTG 1274
Query 1256 GGCTAAAAACTCGTTCTTTCGATGCAATCAGGGCGGAATTGAGAGCGTTCTTCGACGTGC 1315
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1275 GGCTAAAAACTCGTTCTTTCGATGCAATCAGGGCGGAATTGAGAGCGTTCTTCGACGTCC 1334
Query 1316 ATGATCAAGAAGGGAGTTTCCCTGGTGGGGTTCATTTAGAAATGACAGGGCAAAACGTGA 1375
||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||
Sbjct 1335 ATGATCAAGAAGGGAGTTTCCCTGGCGGGGTTCATTTAGAAATGACTGGTCAAAACGTGA 1394
Query 1376 CAGAATGCGTTGGAGGGTCACGCACCATCACTTACAACGATCTAAGCTCACGCTACCACA 1435
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1395 CAGAATGTGTCGGAGGGTCACGCACCATCACTTACAACGATCTAAGCTCACGCTACCACA 1454
Query 1436 CTCATTGTGACCCAAGGCTCAACGCCTCTCAGTCTCTGGAGCTTGCATTCATCATTGCAG 1495
|||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1455 CTCACTGTGACCCAAGACTCAACGCATCTCAGTCTCTGGAGCTTGCATTCATCATTGCAG 1514
Query 1496 AGCGTCTACGAAAGAGAAGGCTTGGTTCGGGGAA------GTCATCTATTGGAGTCTAGA 1549
||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 1515 AGCGTCTGCGAAAGAGAAGGCTTGGTTCCGGGAATCTTCCGTCATCTATTGGAGTCTAGA 1574
Query 1550 GAATAAGAAAATACTTGTCCGAGTTAGGATGTGTGTGTATAGAG 1593
||| |||||||||||| |||||| ||||||||||||||||||||
Sbjct 1575 GAACAAGAAAATACTTATCCGAGCTAGGATGTGTGTGTATAGAG 1618
> AT1G22410.1 | Symbols: | Class-II DAHP synthetase family protein
| chr1:7912046-7915003 FORWARD LENGTH=1919
Length=1919
Score = 802 bits (434), Expect = 0.0
Identities = 992/1259 (79%), Gaps = 48/1259 (4%)
Strand=Plus/Plus
Query 278 CTTTCCCTCCTATAGTTTTCGCTGGTGAGGCGAGGA-AACTAGAGGATAAGCTT-GGTCA 335
|||| ||||| || || ||||| || || || | || || ||||| | | || || ||
Sbjct 391 CTTTTCCTCCGATCGTGTTCGCCGGAGAAGCTA-GATTGCTTGAGGA-ACGATTAGGACA 448
Query 336 AGCGGCCATGGGTCAGGCCTTTATGCTT-CAAGGTGGTGATTGTGCTGAGAGTTTCAAGG 394
||| || |||||| | || ||| || || ||||| || |||||||| ||||||||||| |
Sbjct 449 AGCAGCGATGGGTGAAGCGTTTCTG-TTACAAGGAGGAGATTGTGCAGAGAGTTTCAAAG 507
Query 395 AATTTAACGCTAATAACATTAGAGATACCTTCAGGGTTCTTCTTCAGATGGGTGTTGT-T 453
| ||||| || ||||||||| | ||||| |||||| |||||||||||||||||| ||| |
Sbjct 508 AGTTTAATGCGAATAACATTCGTGATACTTTCAGGATTCTTCTTCAGATGGGTGCTGTGT 567
Query 454 CTCATGTTCGGTGG-CCAGTTACCAGTTATCAAGG-TGGGAAGAATGGCTGGTCAGTTTG 511
| |||||||| || | || | || ||| | |||| |||| |||||||| ||||| ||||
Sbjct 568 -TGATGTTCGGAGGTCAAG-TCCCTGTTGTTAAGGTTGGG-AGAATGGCGGGTCAATTTG 624
Query 512 CCAAGCCGAGATCGGACCCATTTGAGGAGAAAGATGGTGTGAAGCTGCCGAGTTACAGAG 571
| || || |||||||| | ||||||||||||||||| ||||| |||| ||||||||||
Sbjct 625 CGAAACCAAGATCGGATTCGTTTGAGGAGAAAGATGGAGTGAAATTGCCTAGTTACAGAG 684
Query 572 GAGATAACATAAATGGTGATGCTTTTGATGAGAAATCCAGGATTCCTGATCCTCATAGGA 631
|||||||||| ||||| ||||| |||||| |||||| |||||||||||||| || ||||
Sbjct 685 GAGATAACATTAATGGAGATGCGTTTGATTCGAAATCTAGGATTCCTGATCCACAGAGGA 744
Query 632 TGGTTAGAGCCTACACACAATCTGTGGCTACGTTGAATCTCTTGAGAGCATTTGCTACTG 691
|| ||||||| || ||||||| ||||| |||||||| |||||||| ||||||||||
Sbjct 745 TGATTAGAGCTTATTGTCAATCTGCAGCTACTTTGAATCTTTTGAGAGCTTTTGCTACTG 804
Query 692 GAGGTTATGCAGCTATGCAAAGAGTTAGC-CAGTGGAATCTTGATTTCACCCAACATAGT 750
| |||||||| |||||||| ||||||| | || ||||||||||||||||| ||| ||||
Sbjct 805 GTGGTTATGCTGCTATGCAGAGAGTTA-CTCAATGGAATCTTGATTTCACTGAACGTAGT 863
Query 751 GAACAGGGTGACAGGTACCGTGAATTGGCTAATAGAGTTGATG-AG-GCTTTAGGATTCA 808
|| || || ||||||||||||||| | ||||| | ||||||| || || || || ||||
Sbjct 864 GAGCAAGGAGACAGGTACCGTGAACTAGCTAACCGTGTTGATGAAGCGC-TT-GGTTTCA 921
Query 809 TGGGTGCAGCTGGACTTACCAATGC-A-CACCCCATCATGAC-TACTACTGAGTTTTGGA 865
|| || |||||| ||| | | | | || ||||| ||| | || || || || ||||
Sbjct 922 TGCACGCTGCTGGA-TTAACGCT-CGATCATCCCATAATG-CAAACAACCGACTTCTGGA 978
Query 866 CTTCCCATGAGTGTTTGTTAC-TGCCTTATGAGCAAGCACTCACAAGAG-AGGATTCCAC 923
|||| ||||| |||||| | | |||||||||| ||| |||| ||||| | || || ||
Sbjct 979 CTTCTCATGAATGTTTGCT-CTTGCCTTATGAACAATCACTAACAAG-GCTTGACTCAAC 1036
Query 924 ATCTGGACTTTACTATGATTGCTCTGCGCACATGCTTTGGGTTGGAGAGCGAACTC-GCC 982
||||| || ||||| ||||| ||||| || ||| ||||||| || |||||||| | | |
Sbjct 1037 CTCTGGTCTCTACTACGATTGTTCTGCCCATATGATTTGGGTCGGTGAGCGAAC-CAGAC 1095
Query 983 AACTCGATGGTGCCCATGTTGAGTTTC-TGAGAGGAATCGCTAACCCCCTTGGAATCAAG 1041
| || |||||||||||||| ||| ||| | ||||| | ||||| || ||||||||||||
Sbjct 1096 AGCTAGATGGTGCCCATGTCGAG-TTCTTAAGAGGTGTTGCTAATCCTCTTGGAATCAAG 1154
Query 1042 GTGAGTGATAAAATGG-TCCCTAGTGAACTGGTTAGGCTGATAGAGATACTA-AACCCTC 1099
|||||||||||||||| ||| || || || || | | |||| ||||| || || ||
Sbjct 1155 GTGAGTGATAAAATGGATCCAAAG-GAGCTAGTGAAGTTGATTGAGAT-CTTGAATGCTG 1212
Query 1100 AGAACAAGCCTGGAAGGATTACAGTTATTGTGAGAATGGGAGCTGAGAATATGCGGGTTA 1159
| || |||||||||||||||||| | || ||||||||||||||||||||| | || |
Sbjct 1213 ACAATAAGCCTGGAAGGATTACAATAATCACAAGAATGGGAGCTGAGAATATGAGAGTGA 1272
Query 1160 AGCTTCCTAATTTGATCAGAGCAGTACGAGGAGCCGGTCAGATAGTGACTTGGGTTAGTG 1219
|||||||| |||||||||||| ||| ||| | || || ||||| ||||||||||| ||||
Sbjct 1273 AGCTTCCTCATTTGATCAGAGAAGTGCGACGTGCTGGACAGATTGTGACTTGGGTCAGTG 1332
Query 1220 ATCCAATGCATGGAAACACAATCATGGCTCCTGGTGGGCTAAAAACTCGTTC-TTTCGAT 1278
|||||||||| |||||||| || | ||||||| |||| || || |||||| | ||| ||
Sbjct 1333 ATCCAATGCACGGAAACACCATTAAGGCTCCTTGTGGTCTCAAGACTCGTCCCTTT-GAC 1391
Query 1279 GCAATCAGGGCGGAATTGAGAGCGTTCTTCGACGTGCATGATCAAGAAGGGAGTTTCCCT 1338
|| ||| ||| ||| ||||||| |||||||||||||| || |||||||| || |||
Sbjct 1392 GCCATCTTGGCTGAAGTGAGAGCTTTCTTCGACGTGCACGAGCAAGAAGGTAGCCACCCC 1451
Query 1339 GGTGGGGTTCATTTAGAAATGACAGGGCAAAACGTGACAGAATGCGTTGGAGGGTCACGC 1398
|| || |||| |||||||||| || || |||||||| || ||| | || || ||||||
Sbjct 1452 GGAGGAATTCACCTAGAAATGACTGGTCAGAACGTGACCGAGTGCATCGGTGGTTCACGC 1511
Query 1399 ACCA-TCAC-TTACAACGATCTAAGCT-CACGCTACCACACTCATTGTGACCCAAGGCTC 1455
|| | |||| || | |||| || | | |||| |||||||| || ||||| || | ||
Sbjct 1512 AC-AGTCACATT-CGACGA-CTTGGGTTCACGTTACCACACGCACTGTGATCCTCGCCTT 1568
Query 1456 AACGCCTCTCAGTCTCTGGAGCT-TGCATTCATCATTGCAGAGCGTCT-ACGAAAGAGA 1512
|| || || |||||||| ||||| | | |||||||| || || ||||| | ||||||||
Sbjct 1569 AATGCTTCACAGTCTCTTGAGCTCTCC-TTCATCATCGCCGAACGTCTTA-GAAAGAGA 1625
> AT4G39980.1 | Symbols: DHS1 | 3-deoxy-D-arabino-heptulosonate
7-phosphate synthase 1 | chr4:18539575-18542093 FORWARD LENGTH=1918
Length=1918
Score = 795 bits (430), Expect = 0.0
Identities = 995/1264 (79%), Gaps = 54/1264 (4%)
Strand=Plus/Plus
Query 278 CTTTCCCTCCTATAGTTTTCGCTGGTGAGGCGAGGAAACTAGAGGATAAGCTTGG-TCAA 336
|||| ||||| || || ||||| || || || ||||| || || || || |||| | |
Sbjct 396 CTTTTCCTCCGATTGTGTTCGCCGGAGAAGCTAGGAATCTTGAAGA-GAGATTGGCTGAT 454
Query 337 GCGGCCATGGGTCAGGCCTTTATGCTTCAAGGTGGTGATTGTGCTGAGAGTTTCAAGGAA 396
|| || | ||| | || ||| | || ||||| ||||||||||||||||||||||||||
Sbjct 455 GCTGCTGTTGGTAAAGCTTTTCTTCTCCAAGGAGGTGATTGTGCTGAGAGTTTCAAGGAG 514
Query 397 TTTAACGCTAATAACATTAGAGATACCTTCAGGGTTCTTCTTCAGATGGGTGTTGTTCTC 456
|| || |||| ||| || ||||| |||||||||||||| ||||||||| || |||||||
Sbjct 515 TTCAATGCTACTAATATCAGAGACACCTTCAGGGTTCTGCTTCAGATGAGTATTGTTCTT 574
Query 457 ATGTTCGGTGGCCA-GTTACCAGTTATCAAGG-TGGGAAGAATGGCTGGTCAGTTTGCCA 514
| ||||||||||| ||| || || || |||| |||| || ||||||||||| ||||| |
Sbjct 575 ACATTCGGTGGCCAGGTT-CCGGTCATTAAGGTTGGG-AGGATGGCTGGTCAATTTGCAA 632
Query 515 AGCCGAGATCGGACCCATTTGAGGAGAAAGATGGTGTGAAGCTGCCGAGTTAC-AGAGGA 573
|||| ||||| || ||||||||||||| ||||| ||||| | || || ||| || |||
Sbjct 633 AGCCTAGATCTGATGCATTTGAGGAGAAGGATGGAGTGAAATTACCAAGCTACAAG-GGA 691
Query 574 GATAACATAAATGGTGATGCTTTTGATGAGAAATCCAGGATTCCTGATCCTCATAGGATG 633
|||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 692 GATAACATCAATGGTGATACTTTTGATGAGAAATCCAGGATTCCTGATCCTAATAGGATG 751
Query 634 GTTAGAGCCTACACACAATCTGTGGCTACGTTGAATCT-CTTGAGAGCATTTGCTACTGG 692
|| |||| ||||| ||||||| ||||| |||||||| ||| ||||| ||||| |||||
Sbjct 752 ATTCGAGCTTACACTCAATCTGCAGCTACTTTGAATCTTCTT-AGAGCCTTTGCCACTGG 810
Query 693 AGGTTATGCAGCTATGCAAAGAGTTAGC-CAGTGGAATCTTGATTTCACCCAACATAGTG 751
|||||| || ||||| |||||||||| | || ||||| |||||||| |||| ||||
Sbjct 811 AGGTTACGCTGCTATTCAAAGAGTTA-CTCAATGGAACCTTGATTTTGTTGAACAAAGTG 869
Query 752 AACAGGGTGACAGGTACC-GTGAATTGGCTAATAGAGTTGATGAGGCTTTAGGATTCATG 810
| || | ||||||||||| | ||||| |||||||| ||||||||||| || || ||||||
Sbjct 870 AGCAAGCTGACAGGTACCAG-GAATTAGCTAATAGGGTTGATGAGGCCTTGGGGTTCATG 928
Query 811 GGTGCA-GCTGGACTTACCAATGCA-CACCC-CATCATGACTACTACTGAGTTT-TGGAC 866
|||| | ||||||| || | | || || | | |||||||| ||||| ||| | ||
Sbjct 929 TCTGCATG-TGGACTTGGCACGG-ATCATCCACTT-ATGACTACAACTGA-TTTCTACAC 984
Query 867 TTCCCATGAGTGTTTG-TTACTGCCTTATGAGCAAG-CACTCACAAGAGA-GGATTCCAC 923
||||||||||||||| || ||||||||||| || | | || ||||| | |||||| ||
Sbjct 985 ATCCCATGAGTGTTTGCTT-CTGCCTTATGAACA-GTCCCTTACAAG-GTTGGATTCAAC 1041
Query 924 ATCTGGACTTTACTATGATTGCTCTGCGCACATGCTTTGG-GTTGGAGAGCGAACTC-GC 981
||||| || ||||||||||| ||||| |||||| | ||| | |||||||| || | |
Sbjct 1042 TTCTGGTCTCTACTATGATTGTTCTGCACACATGGTCTGGTGC-GGAGAGCGTAC-CAGA 1099
Query 982 CAACTCGATGGTGCCCATGTTGAGTTTCTGAGAGGAATCGCTAACCCCCTTGGAATCAAG 1041
||| | ||||| || ||||| |||||||| || || || ||||| || || || || |||
Sbjct 1100 CAATTGGATGGCGCTCATGTCGAGTTTCTCAGGGGGATTGCTAATCCTCTGGGCATTAAG 1159
Query 1042 GTGAGTGATAAAATGG-TCCCTAGTGAACTGGTTAGGCT-GATAGAGATACTAAACCCTC 1099
||||| | ||||||| ||||| ||| ||||||| ||| | |||| || || || |||
Sbjct 1160 GTGAGCAACAAAATGGATCCCTT-TGAGCTGGTTAAGCTAG-TAGAAATCCTGAATCCTA 1217
Query 1100 AGAACAAGCCTGGAAGGATTACAGTTATTGTGAGAATGGGAGCTGAGAATATGCGGGTTA 1159
| |||||||||||||| || || || |||||||||||||| || ||||| ||| | ||||
Sbjct 1218 ATAACAAGCCTGGAAGAATCACTGTAATTGTGAGAATGGGTGCCGAGAACATGAGAGTTA 1277
Query 1160 AGCTTCCTAATTTGATCAGAGCAGTACG-AGGAGCCGGTCAGATAGTGACTTGGGT-TAG 1217
||||||| | ||||||||||||| || || | | || ||||| ||||| ||||| | |
Sbjct 1278 AGCTTCCCCACCTGATCAGAGCAGTCCGCAG-ATCAGGCCAGATTGTGACATGGGTCT-G 1335
Query 1218 TGATCCAATGCATGGAAACACAATCATGGCTCCTGGTGGGCTAAAAACTCGTTC-TTTCG 1276
|||||||||||||||||||| |||| || ||| | || || ||||| ||| | ||| |
Sbjct 1336 CGATCCAATGCATGGAAACACCATCAAAGCACCTTGCGGTCTTAAAACACGTGCCTTT-G 1394
Query 1277 A-TGCAAT-CAGGGCGGAATTGAGAGCGTTC-TTCGACGTGCATGATCAAGAAGGGAGTT 1333
| | |||| | || | ||| | |||| ||| || || ||||| || |||||||| ||
Sbjct 1395 ACT-CAATACTGG-CTGAAGTCCGAGCATTCCTT-GATGTGCACGAGCAAGAAGGAAGCC 1451
Query 1334 TCCCTGGTGGGGT-TC-ATTTAGAAATGACAGGGCAAAACGTGACAGAATGCGTTGGAGG 1391
| | || | ||| || || | || |||||||| || ||||||||||||||| |||||||
Sbjct 1452 ACGC-GG-GCGGTATCCATCTCGAGATGACAGGTCAGAACGTGACAGAATGCATTGGAGG 1509
Query 1392 GTCACGCACCATCACTTACAACGATCTAAGCTCACGCTACCACACTCATTGTGACCCAAG 1451
||| ||||| | || ||| | || || || || ||||||||||| || |||||||||||
Sbjct 1510 GTCCCGCACTGTGACCTACGATGACCTCAGTTCTCGCTACCACACACACTGTGACCCAAG 1569
Query 1452 GCTCAACGCCTCTCAGTCTCTGGAGCTTGCATTCATCATTGCAGAGCGTCT-ACGAAAGA 1510
||| ||||| || |||||||| || ||||| ||||| ||||||| || || | ||| ||
Sbjct 1570 GCTGAACGCGTCACAGTCTCTTGAACTTGCCTTCATTGTTGCAGAACGGCTCAGGAA-GA 1628
Query 1511 GAAG 1514
||||
Sbjct 1629 GAAG 1632
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 85391127045
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5