BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491347
Length=2444
Score E
Sequences producing significant alignments: (Bits) Value
AT4G33430.2 | Symbols: BAK1 | BRI1-associated receptor kinase |... 2593 0.0
AT2G13790.1 | Symbols: ATSERK4, SERK4, BKK1, BAK7 | somatic emb... 1594 0.0
AT2G13800.1 | Symbols: ATSERK5, SERK5, BAK8 | somatic embryogen... 1007 0.0
> AT4G33430.2 | Symbols: BAK1 | BRI1-associated receptor kinase
| chr4:16086311-16090777 REVERSE LENGTH=2821
Length=2821
Score = 2593 bits (1404), Expect = 0.0
Identities = 1565/1639 (95%), Gaps = 25/1639 (2%)
Strand=Plus/Plus
Query 816 TGCGTCTTAATAACAATAGCTTATCTGGAGAAATTCCAAGGTCTCTGACTGCTGTCCTGA 875
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1064 TGCGTCTTAATAACAATAGCTTATCTGGAGAAATTCCAAGGTCTTTGACTGCTGTCCTGA 1123
Query 876 CGCTGCAAGTTCTGGATCTCTCAAATAATGGTCTCACTGGAGATATTCCTGTTAATGGTT 935
|||| |||||||||||||||||||| ||| |||||| ||||||||||||||||||||||
Sbjct 1124 CGCTACAAGTTCTGGATCTCTCAAACAATCCTCTCACCGGAGATATTCCTGTTAATGGTT 1183
Query 936 CCTTTTCACTTTTCACTCCTGGTCTCATCAGTTTTGCCAACACCAAGTTGACTCCCCTTC 995
||||||||||||||||| | | ||||||||||||||||||||||||||||||||||
Sbjct 1184 CCTTTTCACTTTTCACT-C----C-AATCAGTTTTGCCAACACCAAGTTGACTCCCCTTC 1237
Query 996 CTGCATCTCCGCCGCCTCCTATCTCTCCTACACCGCCATCACCTGCAGGGAGTAATAGAA 1055
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1238 CTGCATCTCCACCGCCTCCTATCTCTCCTACACCGCCATCACCTGCAGGGAGTAATAGAA 1297
Query 1056 TTACTGGAGCGATTGCGGGAGGAGTTGCTGCAGGTGCTGCACTTCTATTTGCTGTTCCGG 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1298 TTACTGGAGCGATTGCGGGAGGAGTTGCTGCAGGTGCTGCACTTCTATTTGCTGTTCCGG 1357
Query 1116 CCATTGCACTTGCTTGGTGGCGAAGGAAAAAACCACAGGACCACTTCTTTGATGTACCAG 1175
|||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 1358 CCATTGCACTAGCTTGGTGGCGAAGGAAAAAGCCGCAGGACCACTTCTTTGATGTACCAG 1417
Query 1176 CTGAAGAGGACCCAGAGGTTCATTTAGGACAACTCAAGAGGTTTTCATTGCGTGAACTAC 1235
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1418 CTGAAGAGGACCCAGAAGTTCATTTAGGACAACTGAAGAGGTTTTCATTGCGTGAACTAC 1477
Query 1236 AAGTTGCTTCGGATAATTTTAGCAAC-AGAAACATATTGGGTAGAGGTGGTTTTGGTAAA 1294
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 1478 AAGTTGCTTCGGATAATTTTAGCAACAAG-AACATATTGGGTAGAGGTGGTTTTGGTAAA 1536
Query 1295 GTTTATAAAGGACGGTTAGCTGATGGTACTTTAGTGGCGGTTAAAAGGCTAAAAGAGGAG 1354
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1537 GTTTATAAAGGACGGTTAGCTGATGGTACTTTAGTGGCCGTTAAAAGGCTAAAAGAGGAG 1596
Query 1355 CGCACCCAAGGTGGTGAACTGCAGTTCCAGACCGAGGTTGAGATGATTAGTATGGCGGTT 1414
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1597 CGCACCCAAGGTGGCGAACTGCAGTTCCAGACAGAGGTTGAGATGATTAGTATGGCGGTT 1656
Query 1415 CACAGAAACTTGCTTCGGCTTCGTGGATTTTGCATGACTCCAACCGAAAGATTGCTTGTT 1474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1657 CACAGAAACTTGCTTCGGCTTCGTGGATTTTGCATGACTCCAACCGAAAGATTGCTTGTT 1716
Query 1475 TATCCCTACATGGCTAATGGAAGTGTTGCCTCCTGTTTAAGAGAACGTCCTGAGTCCCAG 1534
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1717 TATCCCTACATGGCTAATGGAAGTGTTGCCTCCTGTTTAAGAGAACGTCCCGAGTCCCAG 1776
Query 1535 CCACCACTTGATTGGCCAAAGAGACAGCGTATTGCGTTGGGATCTGCAAGAGGGCTTGCA 1594
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CCACCACTTGATTGGCCAAAGAGACAGCGTATTGCGTTGGGATCTGCAAGAGGGCTTGCG 1836
Query 1595 TATTTACATGATCATTGTGACCCAAAGATTATTCATCGAGATGTGAAAGCTGCAAATATT 1654
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1837 TATTTACATGATCATTGCGACCCAAAGATTATTCATCGAGATGTGAAAGCTGCAAATATT 1896
Query 1655 TTATTGGATGAAGAGTTTGAAGCCGTGGTTGGGGATTTTGGACTTGCAAAACTCATGGAC 1714
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1897 TTGTTGGATGAAGAGTTTGAAGCCGTGGTTGGGGATTTTGGACTTGCAAAACTCATGGAC 1956
Query 1715 TACAAAGACACACACGTGACAACCGCAGTGCGTGGTACAATTGGTCATATAGCCCCTGAG 1774
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1957 TACAAAGACACACATGTGACAACCGCAGTGCGTGGGACAATTGGTCATATAGCCCCTGAG 2016
Query 1775 TACCTTTCTACAGGAAAATCATCAGAGAAAACCGATGTCTTTGGGTATGGAGTCATGCTT 1834
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2017 TACCTTTCCACTGGAAAATCATCAGAGAAAACCGATGTCTTTGGGTATGGAGTCATGCTT 2076
Query 1835 CTTGAGCTTATCACTGGACAAAGGGCTTTCGATCTTGCTCGCCTTGCAAATGATGATGAT 1894
||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||
Sbjct 2077 CTTGAGCTTATCACTGGACAAAGGGCTTTTGATCTTGCTCGCCTCGCGAATGATGATGAT 2136
Query 1895 GTCATGTTACTAGACTGGGTGAAAGGGTTGTTAAAAGAGAAGAAATTGGAAGCACTAGTA 1954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2137 GTCATGTTACTAGACTGGGTGAAAGGGTTGTTAAAAGAGAAGAAATTGGAAGCACTAGTA 2196
Query 1955 GATGTTGATCTTCAGGGGAATTACATAGACGAAGAAGTGGAGCAGCTGATTCAAGTGGCT 2014
||||||||||||||||| ||||||| ||||||||||||||||||||| || |||||||||
Sbjct 2197 GATGTTGATCTTCAGGGTAATTACAAAGACGAAGAAGTGGAGCAGCTAATCCAAGTGGCT 2256
Query 2015 CTGCTCTGCACTCAGAGTTCACCAATGGAAAGACCCAAAATGTCTGAAGTTGTAAGAATG 2074
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2257 TTACTCTGCACTCAGAGTTCACCAATGGAAAGACCCAAAATGTCTGAAGTTGTAAGAATG 2316
Query 2075 CTTGAAGGAGATGGTTTAGCTGAGAGATGGGAAGAGTGGCAAAAGGAGGAAATGTTCAGA 2134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2317 CTTGAAGGAGATGGTTTAGCTGAGAGATGGGAAGAGTGGCAAAAGGAGGAAATGTTCAGA 2376
Query 2135 CAAGATTTCAACTACCCAACCCATCATCCAGCCGTATCTGGCTGGATCATTGGTGATTCC 2194
||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||
Sbjct 2377 CAAGATTTCAACTACCCAACCCACCATCCAGCCGTGTCTGGCTGGATCATTGGCGATTCC 2436
Query 2195 ACTTCCCAGATCGAAAACGAGTACCCCTCGGGTCCAAGATAATATCCGAA-CACGAATGC 2253
|||||||||||||||||||| ||||||||||||||||||||| || |||| ||||||||
Sbjct 2437 ACTTCCCAGATCGAAAACGAATACCCCTCGGGTCCAAGATAAGATTCGAAACACGAATGT 2496
Query 2254 tttttctgtattttttattttatttctgtatttAATGAGGGCTTTAGTTTCTGCTGCTCC 2313
|||||||||||||| | |||| | ||||||||| |||||| ||||| ||||||||||||
Sbjct 2497 TTTTTCTGTATTTTGT-TTTTCT--CTGTATTTATTGAGGGTTTTAGCTTCTGCTGCTCC 2553
Query 2314 ATATTATTGGTTGGTTCTTAAGTGAATACACGAGGATCTGATTGGGTTTGTAAGTGTTAT 2373
|||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||
Sbjct 2554 ATATTATTGGTT----CTTAAGTGAATACATGAGGATCAGATTGGGTTTGTAAGTGTTAT 2609
Query 2374 ATGA--AAAA-GAATTTGAATGTTGTTGAAAGCTAAAACCCAAACATGTCTCTAGG-T-A 2428
|||| |||| | |||||||||||||||||||||||||||||||||||||| || | | |
Sbjct 2610 ATGATGAAAAAGGATTTGAATGTTGTTGAAAGCTAAAACCCAAACATGTCT-TAAGCTCA 2668
Query 2429 C---TTGAGGATTGTTGCG 2444
| |||||||||||||||
Sbjct 2669 CCACTTGAGGATTGTTGCG 2687
Score = 1000 bits (541), Expect = 0.0
Identities = 765/863 (89%), Gaps = 56/863 (6%)
Strand=Plus/Plus
Query 10 tctctcttctctctcCGACCCTTTTTTAGTATATTTTCAGGAAATAtcttcttcct-ctt 68
|||||||| | | | ||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct 71 TCTCTCTT-TGT-TTCGACCCTTTTTTAGTATATTTCCAGGAAATATCTTCTTCCTCCTT 128
Query 69 tcgttttctcttatctcagttttctctcttctcAGCA--AAGTAGTCAACGGTCAGCGAT 126
|||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 129 TCGTTTTCTC-TATCTCAGTTTTCTCTCTTCTCAGCATTAAGTAGTCAACGGTCAGCGAT 187
Query 127 CTCGGCGTTTCTTCTAATCGGAAAATT-T---TTGA-TTTCCTCGATTAATCGATTTGAG 181
||||||||| ||||||||||||||| | | || | |||| | || | | |||
Sbjct 188 CTCGGCGTTCCTTCTAATCGGAAAAGTCTAGCTTCAGTTTCTTTTTTTTTT-GCTTTTTT 246
Query 182 GGtttt-----tt--tc--ttc---t-tctt--tt--ctcttcAAATTAAGTCAACGGAT 224
||||| || || || | | || || ||||||||||||||||||||| |
Sbjct 247 GGTTTCCGCGATTAATCGATTTGGGTATTTTGATTTTCTCTTCAAATTAAGTCAACGGGT 306
Query 225 GAATACGCGTTGAG-GG-CTTTTCTC-T-T-CT------AATTTCATCATCTTGGGGTTT 273
| |||||||||||| || |||||||| | | || |||||||||||||||| ||
Sbjct 307 GGATACGCGTTGAGAGGGCTTTTCTCGTATTCTGCTTCTAATTTCATCATCTTGGTATTA 366
Query 274 CCTTGTGTGG-TAGTTAGCTTAATCGA-GGATTCGAGATCCCTTTTA-C----------- 319
|||||||||| | || ||||||||||| ||||||||||||||||||| |
Sbjct 367 CCTTGTGTGGGTGGT-AGCTTAATCGAAGGATTCGAGATCCCTTTTATCAGGGGTTTTAA 425
Query 320 CAATGATGGATTTTCTCTGATGAGGGAGAGTTCTAGGGTTTGTTTTTAATCTCT-GAGGA 378
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 426 CAATGATGGATTTTCTCTGATGAGGGATAGTTCTAGGGTTTGTTTTTAATCTCTTGAGGA 485
Query 379 TAAAATGGAACGAAGATTGATGATCCCTTGCTTCTTTTGGTTGATTCTCGTTTTGGATTT 438
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 486 TAAAATGGAACGAAGATTAATGATCCCTTGCTTCTTTTGGTTGATTCTCGTTTTGGATTT 545
Query 439 GGTTCTCAGAGTCTCGGGCAACGCCGAAGGTGATGCTCTGAGTGCACTGAAAAACAGTTT 498
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 546 GGTTCTCAGAGTCTCGGGCAACGCCGAAGGTGATGCTCTAAGTGCACTGAAAAACAGTTT 605
Query 499 AGCTGACCCCAACAAGGTGCTTCAAAGCTGGGATGCGACTCTTGTCACTCCATGTACATG 558
||| ||||| || |||||||||||||| |||||||| |||||||| ||||||||||||||
Sbjct 606 AGCCGACCCTAATAAGGTGCTTCAAAGTTGGGATGCTACTCTTGTTACTCCATGTACATG 665
Query 559 GTTTCATGTTACTTGCAATAGCGATAATAGCGTTACACGTGTTGACCTTGGCAATGCAAA 618
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct 666 GTTTCATGTTACTTGCAATAGCGACAATAGTGTTACACGTGTTGACCTTGGGAATGCAAA 725
Query 619 TCTATCTGGACAGCTCGTAATGCAACTTGGTCAGCTTCCAAACTTGCAGTACTTGGAGCT 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 726 TCTATCTGGACAGCTCGTAATGCAACTTGGTCAGCTTCCAAACTTGCAGTACTTGGAGCT 785
Query 679 TTATAGCAATAACATTACTGGGACAATCCCAGAGCAGCTTGGAAATTTGACGGAATTGGT 738
||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct 786 TTATAGCAATAACATTACTGGGACAATCCCAGAACAGCTTGGAAATCTGACGGAATTGGT 845
Query 739 GAGCTTGGATCTTTACTTGAACAATTTAAGCGGTCCTATCCCATCAACTCTCGGCCGACT 798
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 846 GAGCTTGGATCTTTACTTGAACAATTTAAGCGGGCCTATTCCATCAACTCTCGGCCGACT 905
Query 799 TAAGAAACTCCGTTTCTTGCGTC 821
||||||||||||||||||| |||
Sbjct 906 TAAGAAACTCCGTTTCTTGAGTC 928
> AT2G13790.1 | Symbols: ATSERK4, SERK4, BKK1, BAK7 | somatic embryogenesis
receptor-like kinase 4 | chr2:5741820-5746793 FORWARD
LENGTH=2234
Length=2234
Score = 1594 bits (863), Expect = 0.0
Identities = 1519/1829 (83%), Gaps = 71/1829 (4%)
Strand=Plus/Plus
Query 442 TCTCAGAGTCTCGGGCAACGCCGAAGGTGATGCTCTGAGTGCA-CTGAAAAACAG--T-T 497
|||||||||| | || ||||| |||||||||||| ||| | || ||||||||||| | |
Sbjct 231 TCTCAGAGTCGCTGGAAACGCTGAAGGTGATGCTTTGACT-CAGCTGAAAAACAGTTTGT 289
Query 498 --T-AGCTGACCC--C-AACAAGGTGCTTCAAAGCTGGGATGCGACTCTTGTCACTCCAT 551
| || |||||| | ||||| || || |||||||||||||| |||||||| |||||||
Sbjct 290 CATCAGGTGACCCTGCAAACAATGTACTCCAAAGCTGGGATGCTACTCTTGTTACTCCAT 349
Query 552 GTACATGGTTTCATGTTACTTGCAATAGC-GATAATAGCGTTACACGTGTTGACCTTGGC 610
|||| ||||||||||||||||||||| | || |||| ||||| ||||||||||||||
Sbjct 350 GTACTTGGTTTCATGTTACTTGCAAT-CCTGAGAATAAAGTTACTCGTGTTGACCTTGGG 408
Query 611 AATGCAAATCTATCTGGACAGCTCG-T-AATGCAACTTGGTCAGCTTCCAAACTTGCAGT 668
|||||||| ||||||||| || | | | | | |||||||||||||| |||||||||||
Sbjct 409 AATGCAAAACTATCTGGAAAGTTGGTTCCA-G-AACTTGGTCAGCTTTTAAACTTGCAGT 466
Query 669 ACTTGGAGCTTTATAGCAATAACATTAC-TGGGACAATCCCAGAGCAGCTTGGAAATTTG 727
|||||||||||||||||||||||||||| |||| || || ||| ||||||| | |||
Sbjct 467 ACTTGGAGCTTTATAGCAATAACATTACAGGGGA-GATACCTGAGGAGCTTGGCGACTTG 525
Query 728 ACGGAATTGGTGAGCTTGGATCTTTACTTGAACAATTTAAGCGGTCCTATCCCATCAACT 787
|||| | || ||||||||||||||| |||| |||||||||| ||||| || ||
Sbjct 526 GTGGAACTAGTAAGCTTGGATCTTTACGCAAACAGCATAAGCGGTCCCATCCCTTCGTCT 585
Query 788 CTCGGCCGACTTAAG-AAACTCCGTTTCTTGCGTCTTAATAACAATAGCTTATCTGGAGA 846
|| ||| || || | |||||||| |||||||||||||| |||||||||||||| || ||
Sbjct 586 CTTGGCAAAC-TAGGAAAACTCCGGTTCTTGCGTCTTAACAACAATAGCTTATCAGGGGA 644
Query 847 AATTCCAAGGTCTCTGACTGCTGTCCTGACGCTGCAAGTTCTGGATCTCTCAAATAAT-G 905
|||||||| | || ||||| |||| | | |||||||||||||||| ||||||| ||| |
Sbjct 645 AATTCCAATGACTTTGACTTCTGTGC--A-GCTGCAAGTTCTGGATATCTCAAACAATCG 701
Query 906 GTCTCACTGGAGATATTCCTGTTAATGGTTCCTTTTCACTTTTCACTCCTGGTCTCATCA 965
| |||| |||||||||||||||||||||||| ||||| || |||||| | || ||||
Sbjct 702 G-CTCAGTGGAGATATTCCTGTTAATGGTTCTTTTTCGCTCTTCACT-C----CT-ATCA 754
Query 966 GTTTTGCCAACACCA-AG-TTGACTCCCCTTCCTGCATCTCCGCCGCCTCCTATCTCTCC 1023
||||||| || | | || || || ||||| | | ||||||| || ||| ||||||
Sbjct 755 GTTTTGCGAATA--ATAGCTTAACGGATCTTCCCGAACCTCCGCCTACTTCTACCTCTCC 812
Query 1024 TACACCGCCATCACCTGCAGGGAGTAATAGAATTACTGGAGCGATTGC-GGGAGGAGTTG 1082
||| || ||| ||||| ||||| | | ||| |||| ||| || || ||| |||||||
Sbjct 813 TACGCCACCACCACCTTCAGGG-G-GGCA-AATGACTGCAGCAATAGCAGGG-GGAGTTG 868
Query 1083 CTGCAGGTGCTGCACTTCTATTTGCTGTTCCGGCCATTGCACTTGCTTGGTGGCGAAGGA 1142
|||||||||| |||||||||||||||||||| |||||||| |||||||||||| | ||
Sbjct 869 CTGCAGGTGCAGCACTTCTATTTGCTGTTCCAGCCATTGCGTTTGCTTGGTGGCTCA-GA 927
Query 1143 A-AAAACCACAGGACCACTTCTTTGATGTACCAGCTGAAGAGGACCCAGAGGTTCATTTA 1201
| |||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct 928 AGAAAACCACAGGACCACTTTTTTGATGTACCTGCTGAAGAAGACCCAGAGGTTCATTTA 987
Query 1202 GGACAACTCAAGAGGTTTTCATTGCGTGAACTACAAGTTGCTTCGGATAATTTTAGCAAC 1261
||||||||||| |||||| | ||||||||||| ||||||| | ||||| ||||||||
Sbjct 988 GGACAACTCAAAAGGTTTACCTTGCGTGAACTGTTAGTTGCTACTGATAACTTTAGCAAT 1047
Query 1262 AGAAACATATTGGGTAGAGGTGGTTTTGGTAAAGTTTATAAAGGACGGTTAGCTGATGGT 1321
| ||| |||||||||||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct 1048 AAAAATGTATTGGGTAGAGGTGGTTTTGGTAAAGTGTATAAAGGACGTTTAGCCGATGGC 1107
Query 1322 ACTTTAGTGGCGGTTAAAAGGCTAAAAGAGGAGCGCACCCAA-GGTGGTGAACTGCAGTT 1380
| | ||||||| || |||||||||||||| || || | |||| ||||| |||||||||||
Sbjct 1108 AATCTAGTGGCTGTCAAAAGGCTAAAAGAAGAACGTA-CCAAGGGTGGGGAACTGCAGTT 1166
Query 1381 CCAGACCGAGGTTGAGATGATTAGTATGGCGGTTCACAGAAACTTGCTTCGGCTTCGTGG 1440
|| ||||| ||||||||||| |||||||| ||||| || ||||||||||||||||||||
Sbjct 1167 TCAAACCGAAGTTGAGATGATCAGTATGGCCGTTCATAGGAACTTGCTTCGGCTTCGTGG 1226
Query 1441 ATTTTGCATGACTCCAACCGAAAGATTGCTTGTTTATCCCTACATGGCTAATGGAAGTGT 1500
||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 1227 CTTTTGCATGACTCCAACTGAAAGATTACTTGTTTATCCCTACATGGCTAATGGAAGTGT 1286
Query 1501 TGCCTCCTGTTTAAGAGAACGTCCTGA-GTCCCAGCCACCACTTGATTGGCCAAAGAGAC 1559
||| || ||||||||||| |||||||| | | | ||| |||||||||||||||| |||
Sbjct 1287 TGCTTCTTGTTTAAGAGAGCGTCCTGAAGGCA-ATCCAGCACTTGATTGGCCAAAAAGAA 1345
Query 1560 AGCGTATTGCGT-TGGGATCTGCAAGAGGGCTTGCATATTTACATGATCATTGTGACCCA 1618
||| |||||| | ||||||| ||||| |||||||| ||||||||||||||||| |||| |
Sbjct 1346 AGCATATTGC-TCTGGGATCAGCAAGGGGGCTTGCGTATTTACATGATCATTGCGACCAA 1404
Query 1619 AAGATTATTCATCGAGATGTGAAAGCTGCAAATATTTTATTGGATGAAGAGTTTGAAGCC 1678
|| || ||||| || ||||| |||||||| ||||| || || |||||||||||||||||
Sbjct 1405 AAAATCATTCACCGGGATGTTAAAGCTGCTAATATATTGTTAGATGAAGAGTTTGAAGCT 1464
Query 1679 GTGGTTGGGGATTTTGGACTTGCAAAACTCATGGACTACAAAGACACACACGTGACAACC 1738
|| ||||| |||||||| || |||||| | ||| | || || ||| | || ||||||||
Sbjct 1465 GTTGTTGGAGATTTTGGGCTCGCAAAATTAATGAATTATAATGACTCCCATGTGACAACT 1524
Query 1739 GCAGTGCGTGGTACAATTGGTCATATAGC-CCCTGAGTACCTTTCTACAGGAAAATCATC 1797
|| || || ||||||||||| |||||||| ||| |||||||| || ||||||||||| ||
Sbjct 1525 GCTGTACGCGGTACAATTGGCCATATAGCGCCC-GAGTACCTCTCGACAGGAAAATCTTC 1583
Query 1798 AGAGAAAACCGATGTCTTTGGGTATGGAGTCATGCTTCTTGAGCTTATCACTGGACAAAG 1857
||||| || ||||| |||||||| || ||||||||||| ||||| |||||||||||||
Sbjct 1584 TGAGAAGACTGATGTTTTTGGGTACGGGGTCATGCTTCTCGAGCTCATCACTGGACAAAA 1643
Query 1858 GGCTTTCGATCTTGCTCGCCTTGCAAATGATGATGATGTCATGTTACTAGACTGGGTGAA 1917
|||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||
Sbjct 1644 GGCTTTCGATCTTGCTCGGCTTGCAAATGATGATGATATCATGTTACTCGACTGGGTGAA 1703
Query 1918 AG-GGTTGTTAAAAGAGAAGAAATTGGAA-GCACTAGTAGATGTTGATCTTC-AGGGGAA 1974
|| |||| || ||||||||||| |||||| || || || |||| || || | | || ||
Sbjct 1704 AGAGGTT-TTGAAAGAGAAGAAGTTGGAAAGC-CTTGTGGATGCAGAACT-CGAAGGAAA 1760
Query 1975 TTACATAGACGA-AGAAGTGGAGCAGCTGATTCAAGTGGCTCTGCTCTGCACTCAGAGTT 2033
||| | || | |||||||||||||||||| ||| ||||||||||||||||||| ||||
Sbjct 1761 GTACGTGGAA-ACAGAAGTGGAGCAGCTGATACAAATGGCTCTGCTCTGCACTCAAAGTT 1819
Query 2034 CACCAATGGAAAGACCCAAA-ATGTCTGAAGTTGTAAGAATGCTTGAAGGAGATGGTTTA 2092
| |||||||| | || ||| ||||| ||||| || |||||||| |||||||||||||||
Sbjct 1820 CTGCAATGGAACGTCC-AAAGATGTCAGAAGTAGTGAGAATGCTGGAAGGAGATGGTTTA 1878
Query 2093 GCTGAGAGATGGGAAGAGTGGCAAAAGGAGGAAATGTTCAG-ACAAGATTTCAACTACCC 2151
||||||||||||||||| |||||||||||||| ||| || ||| ||||| ||||| |
Sbjct 1879 GCTGAGAGATGGGAAGAATGGCAAAAGGAGGAGATGC-CAATACATGATTTTAACTATC- 1936
Query 2152 AACCC-ATCATCCA-GCCGT-ATCTGGCTGGATCATTGG-TGATTCCACTTCCCAGATCG 2207
|| || ||| || | || | | ||| |||| |||| | |||||| ||||| ||||
Sbjct 1937 AAGCCTATCCTC-ATGCTGGCA-CTGACTGGCTCATCCCCT-ATTCCAATTCCCTTATCG 1993
Query 2208 AAAACGAGTACCCCTCGGGTCCAAGATAA 2236
||||||| |||||||||||||||||||||
Sbjct 1994 AAAACGATTACCCCTCGGGTCCAAGATAA 2022
> AT2G13800.1 | Symbols: ATSERK5, SERK5, BAK8 | somatic embryogenesis
receptor-like kinase 5 | chr2:5753271-5757239 FORWARD
LENGTH=1985
Length=1985
Score = 1007 bits (545), Expect = 0.0
Identities = 947/1138 (83%), Gaps = 40/1138 (4%)
Strand=Plus/Plus
Query 1119 TTGCACTTGCTTGGTGGC-GAAGGAA-AAAACCACAGGACCAC-TTCTTTGATGTACCAG 1175
|||| ||||||||||||| | | ||| ||||| |||| ||| ||| |||||||||| |
Sbjct 694 TTGCGCTTGCTTGGTGGCTG-A-GAAGAAAACTGCAGGGTCACTTTC-TTGATGTACCTG 750
Query 1176 CTGAAGAGGACCCAGAGGTTCATTTAGGACAACTCAAGAGGTTTTCATTGCGTGAACTAC 1235
||||||| |||||||||||| ||||||||||| | || ||||| || ||||||||||| |
Sbjct 751 CTGAAGAAGACCCAGAGGTTTATTTAGGACAATTTAAAAGGTTCTCCTTGCGTGAACTGC 810
Query 1236 AAGTTGCTTCGGATAATTTTAGCAACAGAAACATATTGGGTAGAGGTGGTTTTGGTAAAG 1295
||||||| | || || |||||||| ||||| ||||||| | ||| ||||||||| |
Sbjct 811 TAGTTGCTACAGAGAAATTTAGCAAAAGAAATGTATTGGGCAAAGGACGTTTTGGTATA- 869
Query 1296 TT-TATAAAGGACGGTTAGCTGATGGTACTTTAGTGGCGGTTAAAAGGCTAAAAGAGGAG 1354
|| ||||||||||| |||||||||| ||| ||||||| || ||| ||||||| || ||
Sbjct 870 TTGTATAAAGGACGTTTAGCTGATGACACTCTAGTGGCTGTGAAACGGCTAAATGAAGAA 929
Query 1355 CGCACCCAA-GGTGGTGAACTGCAGTTCCAGACCGAGGTTGAGATGATTAGTATGGCGGT 1413
|| | |||| ||||| ||||||||||| || ||||| ||||||||||| |||||||| ||
Sbjct 930 CGTA-CCAAGGGTGGGGAACTGCAGTTTCAAACCGAAGTTGAGATGATCAGTATGGCCGT 988
Query 1414 TCACAGAAACTTGCTTCGGCTTCGTGGATTTTGCATGACTCCAACCGAAAGATTGCTTGT 1473
||| || |||||||||||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct 989 TCATAGGAACTTGCTTCGGCTTCGTGGCTTTTGCATGACTCCAACTGAAAGATTACTTGT 1048
Query 1474 TTATCCCTACATGGCTAATGGAAGTGTTGCCTCCTGTTTAAGAGAACGTCCTGA-GTCCC 1532
|||||||||||||||||||||||||||||| || ||||||||||| |||||||| | |
Sbjct 1049 TTATCCCTACATGGCTAATGGAAGTGTTGCTTCTTGTTTAAGAGAGCGTCCTGAAGGCA- 1107
Query 1533 AGCCA-CCACTTGATTGGCCAAAGAGACAGCGTATTGCGT-TGGGATCTGCAAGAGGGCT 1590
| ||| || ||||| |||||||| ||| ||| |||||| | ||||||| ||||| |||||
Sbjct 1108 ATCCAGCC-CTTGACTGGCCAAAAAGAAAGCATATTGC-TCTGGGATCAGCAAGGGGGCT 1165
Query 1591 TGCATATTTACATGATCATTGTGACCCAAAGATTATTCATC-GAGATGTGAAAGCTGCAA 1649
||||||||||| |||||||| |||| |||||| ||||| | | ||||||||||||||||
Sbjct 1166 CGCATATTTACACGATCATTGCGACCAAAAGATCATTCACCTG-GATGTGAAAGCTGCAA 1224
Query 1650 ATATTTTATTGGATGAAGAGTTTGAAGCCGTGGTTGGGGATTTTGGACTTGCAAAACTCA 1709
|||| | || ||||||||||||||||| || ||||| |||||||| || |||||| | |
Sbjct 1225 ATATACTGTTAGATGAAGAGTTTGAAGCTGTTGTTGGAGATTTTGGGCTAGCAAAATTAA 1284
Query 1710 TGGACTACAAAGACACACACGTGACAACCGCAGTGCGTGGTACAATTGGTCATATAGC-C 1768
|| | || || ||| | || |||||||| || || || ||||| ||||| |||||||| |
Sbjct 1285 TGAATTATAACGACTCCCATGTGACAACTGCTGTACGGGGTACGATTGGCCATATAGCGC 1344
Query 1769 CCTGAGTACCTTTCTACAGGAAAATCATCAGAGAAAACCGATGTCTTTGGGTATGGAGTC 1828
|| |||||||| || ||||||||||| || ||||| || ||||| |||||||| || |||
Sbjct 1345 CC-GAGTACCTCTCGACAGGAAAATCTTCTGAGAAGACTGATGTTTTTGGGTACGGGGTC 1403
Query 1829 ATGCTTCTTGAGCTTATCACTGGACAAAGGGCTTTCGATCTTGCTCGCCTTGCAAATGAT 1888
|||||||| ||||| ||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct 1404 ATGCTTCTCGAGCTCATCACTGGACAAAAGGCTTTCGATCTTGCTCGGCTTGCAAATGAT 1463
Query 1889 GATGATGTCATGTTACTAGACTGGGTGAAAG-GGTTGTTAAAAGAGAAGAAATTGGAA-G 1946
|||||| |||||||||| ||||||||||||| |||| || ||||||||||| |||||| |
Sbjct 1464 GATGATATCATGTTACTCGACTGGGTGAAAGAGGTT-TTGAAAGAGAAGAAGTTGGAAAG 1522
Query 1947 CACTAGTAGATGTTGATCTTC-AGGGGAATTACATAGACGA-AGAAGTGGAGCAGCTGAT 2004
| || || |||| || || | | || || ||| | || | ||||||||||||||||||
Sbjct 1523 C-CTTGTGGATGCAGAACT-CGAAGGAAAGTACGTGGAA-ACAGAAGTGGAGCAGCTGAT 1579
Query 2005 TCAAGTGGCTCTGCTCTGCACTCAGAGTTCACCAATGGAAAGACCCAAA-ATGTCTGAAG 2063
||| ||||||||||||||||||| ||||| |||||||| | || ||| ||||| ||||
Sbjct 1580 ACAAATGGCTCTGCTCTGCACTCAAAGTTCTGCAATGGAACGTCC-AAAGATGTCAGAAG 1638
Query 2064 TTGTAAGAATGCTTGAAGGAGATGGTTTAGCTGAGAGATGGGAAGAGTGGCAAAAGGAGG 2123
| || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1639 TAGTGAGAATGCTGGAAGGAGATGGTTTAGCTGAGAGATGGGAAGAATGGCAAAAGGAGG 1698
Query 2124 AAATGTTCAG-ACAAGATTTCAACTACCCAACCC-ATCATCCA-GCCGT-ATCTGGCTGG 2179
| ||| || ||| ||||| ||||| | || || ||| || | || | | ||| ||||
Sbjct 1699 AGATGC-CAATACATGATTTTAACTATC-AAGCCTATCCTC-ATGCTGGCA-CTGACTGG 1754
Query 2180 ATCATTGG-TGATTCCACTTCCCAGATCGAAAACGAGTACCCCTCGGGTCCAAGATAA 2236
|||| | |||||| ||||| ||||||||||| ||||||||||| |||||||||
Sbjct 1755 CTCATCCCCT-ATTCCAATTCCCTTATCGAAAACGATTACCCCTCGGGGCCAAGATAA 1811
Score = 359 bits (194), Expect = 8e-98
Identities = 460/584 (79%), Gaps = 35/584 (6%)
Strand=Plus/Plus
Query 390 GAAGATTGATGATCCC-TTGCTTCT-TTTGGTTGATTCTCGTTT-TGGA-TTTGGTTCTC 445
||| || ||| ||||| | |||| | ||||| ||||||| ||| | || |||| ||| |
Sbjct 9 GAACATGGATCATCCCGTGGCTT-TATTTGGCTGATTCT-ATTTCTCGATTTTGTTTC-C 65
Query 446 AGAGTCTCGGGCAACGC-CGAAGGTGATGCTCTGAGTGCACTGAA-AAACAG--T-T--T 498
|||||| | || || | | ||| ||||||||| | ||| || || || ||| | | |
Sbjct 66 AGAGTCACCGGAAAAACAC-AAGTTGATGCTCTCATTGCTCT-AAGAAGCAGTTTATCAT 123
Query 499 -AGCTGACC---CCAACAAGGTGCTTCAAAGCTGGGATGCGACTCTTGTCACTCCATGTA 554
|| ||||| | ||||| | || ||||||||| |||| |||| || |||||||||
Sbjct 124 CAGGTGACCATACAAACAATATACTCCAAAGCTGGAATGCCACTCACGTTACTCCATGTT 183
Query 555 CATGGTTTCATGTTACTTGCAATAGC-GATAATAGCGTTACACGTGTTGACCTTGGCAAT 613
|||||||||||||||||||||||| | || || || ||||| ||| ||||||| || | |
Sbjct 184 CATGGTTTCATGTTACTTGCAATA-CTGAAAACAGTGTTACTCGTCTTGACCTGGGGAGT 242
Query 614 GCAAATCTATCTGGACAGCTCGTAATGCAACTTGGTCAGCTTCCAAACTTGCAGTACTTG 673
|| |||||||||||| | || || || |||| |||||||||||| ||||||||||||
Sbjct 243 GCTAATCTATCTGGAGAACTGGTGCCACAGCTTGCTCAGCTTCCAAATTTGCAGTACTTG 302
Query 674 GAGCTTTATAGCAATAACATTACT-GGGACAATCCCAGAGCAGCTTGGAAATTTGACGGA 732
|| |||| || |||||| |||||| |||| || || ||| ||||||| | |||| |||
Sbjct 303 GAACTTTTTAACAATAATATTACTGGGGA-GATACCTGAGGAGCTTGGCGACTTGATGGA 361
Query 733 ATTGGTGAGCTTGGATCTTTACTTG--AACAATTTAAGCGGTCCTATCCCATCAACTCTC 790
| | || |||||||| |||| ||| ||||| |||||||||| ||||| || ||||
Sbjct 362 ACTAGTAAGCTTGGACCTTT--TTGCAAACAACATAAGCGGTCCCATCCCTTCCTCTCTT 419
Query 791 GGCCGACTTAAG-AAACTCCGTTTCTTGCGTCTTAATAACAATAGCTTATCTGGAGAAAT 849
||| || || | |||||||| |||||||||||| ||||||| |||||||||||||||||
Sbjct 420 GGCAAAC-TAGGAAAACTCCGCTTCTTGCGTCTTTATAACAACAGCTTATCTGGAGAAAT 478
Query 850 TCCAAGGTCTCTGACTGCTGTCCTGACGCTGCAAGTTCTGGATCTCTCAAATAAT-GGTC 908
|||||||||| ||||||| | ||| ||||| | ||||| ||| ||||||| ||| || |
Sbjct 479 TCCAAGGTCTTTGACTGC--T-CTGCCGCTGGATGTTCTTGATATCTCAAACAATCGG-C 534
Query 909 TCACTGGAGATATTCCTGTTAATGGTTCCTTTTCACTTTTCACT 952
||| |||||||||||||||||||||||||||||| | ||||||
Sbjct 535 TCAGTGGAGATATTCCTGTTAATGGTTCCTTTTCGCAGTTCACT 578
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 121384917810
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5