BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491351 Length=2495 Score E Sequences producing significant alignments: (Bits) Value AT4G33390.1 | Symbols: | Plant protein of unknown function (DU... 3205 0.0 > AT4G33390.1 | Symbols: | Plant protein of unknown function (DUF827) | chr4:16075091-16077706 FORWARD LENGTH=2531 Length=2531 Score = 3205 bits (1735), Expect = 0.0 Identities = 2058/2209 (93%), Gaps = 42/2209 (2%) Strand=Plus/Plus Query 293 AGAAAATGGGAAAATTTATATGGATGACACTTTTTTACCTTCCACTTTATCAAACTCTCA 352 ||||||||||||||||||||||||||||||||||||||||| | | ||| ||||| Sbjct 359 AGAAAATGGGAAAATTTATATGGATGACACTTTTTTACCTT---C---A--AAA-TCTCA 409 Query 353 AGTAGAAGAAACACAAGATTCTTCTACTACTCCTACTTTTGTTTCTCCCTCTGCTGAGAT 412 |||| ||||||||||||||||| |||||||||||| |||||| ||||||||||||||||| Sbjct 410 AGTAAAAGAAACACAAGATTCTCCTACTACTCCTAGTTTTGTGTCTCCCTCTGCTGAGAT 469 Query 413 TGTTCTGCCTCGCGTAAACACCAAGTATGAAGCAGAGGGTACAACAAGAAATGCAGTGTC 472 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 470 TGTTCTGCCTCGCGTAAACACCAAGTATGAAGCAGAGGGCACAACAAGAAATGCAGTGTC 529 Query 473 TCCAAGATCTCTGTCTTCCCAAAGAAGCATTGGATCTCCAAGAGCA-TTCGTGTCTCCAA 531 ||||||| |||||| ||||| |||||||||||||||||||||||| | | ||||||||| Sbjct 530 TCCAAGACCTCTGTATTCCCCTAGAAGCATTGGATCTCCAAGAGCACTAC-TGTCTCCAA 588 Query 532 GGTTTGCAGGATCATCATCACCATTGAGCAATGGAACACCCAGAAGTATGGATTCTTTCA 591 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 589 GGTTTGCAGGATCATCATCACCATTGAGCAATGGAACACCCATAAGTATGGATTCTTTCA 648 Query 592 GAGACTCTATTGATACAGCATCACCTTTTGAATCTGTCAAAGAAGCTGTCTCCAAATTTG 651 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 649 GAGACTCAATTGATACAGCATCACCTTTTGAATCTGTCAAAGAAGCTGTTTCCAAATTTG 708 Query 652 GGGGAATTACTGATTGGAAAGCACATAGAATGAAAGTATTAGAGCGACGCAATTTTGTGG 711 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 709 GGGGAATAACTGATTGGAAGGCACATAGAATGAAAGTATTAGAGCGACGCAATTTTGTGG 768 Query 712 AACAAGAGCTCGACAAGATCCAGGAGGAGATTCCTGAGTACAAAAAGAAAGCAGAGATGG 771 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 769 AACAAGAGCTCGACAAGATCCAGGAGGAGATTCCTGAGTACAAAAAGAAATCAGAGATGG 828 Query 772 TCGAGATGTCAAAAATGCTAGCGGTTGAGGAGCTAGAGAGTACAAAGAGACTCATAGAAG 831 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 829 TCGAGATGTCAAAAATGCTAGCGGTTGAGGAGCTAGAGAGTACAAAGAGGCTCATAGAAG 888 Query 832 AGTTGAAGCTTAATCTTGACAAAGCTGAAACAGAAGAAAAACAGGCAAAGCAGGACTCTG 891 | ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| Sbjct 889 AATTGAAGCTTAATCTTGAAAAAGCTGAAACAGAAGAACAACAGGCAAAGCAAGACTCTG 948 Query 892 AGCTGGCCAAGCTGAGAGTTCAAGAGATGGAACAAGGAATTGCTGATGAAGCGAGTGTTG 951 |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 949 AGCTTGCCAAGCTGAGAGTTCAAGAGATGGAACAAGGAATTGCTGATGAAGCTAGTGTTG 1008 Query 952 CAGCTAAAGCACAGCTTGAAGTGGCTCAAGCAAGACATACATCTGCAATTTCAGAACTAG 1011 || ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | | Sbjct 1009 CATCTAAAGCACAGCTTGAAGTCGCTCAAGCAAGACATACATCTGCAATTTCAGAATTGG 1068 Query 1012 AATCTGTCAAGGAAGAGCTACAAAATCTGCAAAAGGAGTATGATGATTTAGTAAAAGAGA 1071 |||||||||||||||||||||||| ||||||||| |||||||| | || |||||||||| Sbjct 1069 AATCTGTCAAGGAAGAGCTACAAACTCTGCAAAACGAGTATGACGCCTTGGTAAAAGAGA 1128 Query 1072 AAGAGTTGGCAGTGAAGGAAGCAGAAGAAGCTGTT-TTGGCTTCTAAAGAAGTTGAGAGG 1130 |||| ||||| ||||||||||| |||||||| ||| || ||||| ||||||||||||||| Sbjct 1129 AAGATTTGGCTGTGAAGGAAGCTGAAGAAGCGGTTATT-GCTTCAAAAGAAGTTGAGAGG 1187 Query 1131 AAAGTTGAAGAACTCACTATAGAGTTGATAGCTACAAAGGAGTCACTAGAATGTGCGCAT 1190 ||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||| Sbjct 1188 AAAGTTGAAGAACTCACTATAGAGTTGATAGCTACAAAGGAGTCATTGGAATGTGCACAT 1247 Query 1191 TCTTCTCATTTGGAGGCGGAAGAACATAAGATTGGAGCAGCCATGTTGCGTGATCAGGAA 1250 |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct 1248 TCTTCTCATTTGGAGGCGGAAGAACATAGGATTGGAGCTGCCATGTTGCGTGATCAGGAG 1307 Query 1251 ACTCACCGGTGGGAGAAGGAACTAAAGCAAGCAGAAGAAGAACTCCAAAGACTTAAGCAA 1310 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 1308 ACTCACCGGTGGGAGAAGGAACTAAAGCAAGCAGAGGAAGAACTACAAAGACTTAAGCAA 1367 Query 1311 CATATAGTTTCTACAAATGAACTACAAGTGAAACTTGAATTTGCTTCAGCATTGCTGCTT 1370 ||| ||||||||||||| ||| |||||||||||||||||||||| ||||| ||||||||| Sbjct 1368 CATTTAGTTTCTACAAAGGAATTACAAGTGAAACTTGAATTTGCATCAGCCTTGCTGCTT 1427 Query 1371 GATTTAAAGAAAGAACTGGCTGATCATATGGAATCATCCAAGTTAAAGCAGGAAACGGGT 1430 ||||| ||||||||| |||| ||||||| |||||||||||| ||||| |||||||| || Sbjct 1428 GATTTGAAGAAAGAATTGGCAGATCATAAAGAATCATCCAAGGTAAAGGAGGAAACGAGT 1487 Query 1431 GAGTC---AGTAACAAACACTGAGATTTCATTACAGGAAAAGACTACAGATATACAAAAA 1487 ||| | ||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 1488 GAGACAGTAGTAACAAACATTGAGATTTCATTACAGGAAAAAACTACAGATATACAAAAA 1547 Query 1488 GCTGTTGCTTCTGCAAAGAAAGAACTCGAAGAAGTGAATGCAAATGTGGAGAAAGCAACT 1547 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 1548 GCTGTTGCTTCTGCAAAGAAAGAACTCGAAGAAGTGAACGCGAATGTGGAGAAAGCAACT 1607 Query 1548 TCTGAAGTGAATTCCTTAAAGGTAGCATTCTCTTCCTTGAGATTGGAAATTGAGAAAGAG 1607 ||||||||||||| ||||||||| |||| |||||||||||||||||||||||| || ||| Sbjct 1608 TCTGAAGTGAATTGCTTAAAGGTTGCATCCTCTTCCTTGAGATTGGAAATTGATAAGGAG 1667 Query 1608 AAATCAGCACTTGACTCACTAAAACAAAGAGAAGGGATGGCATCGGTAACGGTTGCTTCT 1667 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1668 AAATCAGCACTTGACTCATTAAAACAAAGAGAAGGGATGGCATCGGTAACGGTTGCTTCT 1727 Query 1668 TTAGAAGCTGAGATCGACATAACGAGGTGCGAAATAGCTTTGGTTAAGTCCAAGGAAAAA 1727 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1728 CTAGAAGCTGAGATCGACATAACGAGGTGCGAAATAGCTTTGGTTAAGTCCAAGGAAAAA 1787 Query 1728 GAAGCCAGAGAGGAAATGGTGGAGCTACCAAAGCAACTGCAACAAGCAAGTCAAGAGGCT 1787 ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1788 GAAACTAGAGAGGAAATGGTGGAGCTACCAAAGCAACTGCAACAAGCAAGTCAAGAGGCA 1847 Query 1788 GATGAAGCAAAATCATTCGCTGAACTTGCTCGTGAAGAGCTGCGAAAGTCTCAAGAAGAA 1847 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1848 GATGAAGCGAAATCATTCGCTGAACTTGCTCGTGAAGAGCTGCGGAAGTCTCAAGAAGAA 1907 Query 1848 GCAGAGCAAGCAAAGGCTGGAGCAAGTACAATGGAGAGCAGATTATTTGCAGCTCAGAAA 1907 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1908 GCAGAGCAAGCAAAGGCTGGAGCAAGTACAATGGAGAGCAGATTATTTGCAGCTCAGAAA 1967 Query 1908 GAAATTGAGGCTATTAAAGCTTCAGAGAGGCTTGCATTAGCTGCCATAAAGGCCTTGCAA 1967 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 1968 GAAATTGAGGCTATTAAAGCTTCAGAGAGGCTGGCATTAGCTGCCATCAAGGCCTTGCAA 2027 Query 1968 GAGAGCGAATCTAGTTCAAAGGACAACGCTGTTGATTCTCCAAGAACCGTAACACTGACA 2027 ||||| ||||||||||||||||| ||||||||||||||||| || || |||||||||||| Sbjct 2028 GAGAGTGAATCTAGTTCAAAGGAAAACGCTGTTGATTCTCCGAGGACTGTAACACTGACA 2087 Query 2028 ATAGAGGAGTACTATGAGCTTAGCAAACGTGCTCACGAGGCTGAAGAAGCCGCCAATGCA 2087 ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 2088 ATAGAAGAGTACTATGAGCTTAGCAAGCGTGCTCACGAGGCTGAAGAAGCCGCCAATGCA 2147 Query 2088 AGAGTTGCAGCAGCGGTTTCTGAGATCGAAGAAGCCAAAGAAACAGAAAACAGAACCTTG 2147 |||||||||||||||||||||||| | | ||||||||||||||||||||| |||| |||| Sbjct 2148 AGAGTTGCAGCAGCGGTTTCTGAGGTTGGAGAAGCCAAAGAAACAGAAAAGAGAAGCTTG 2207 Query 2148 GAGAAGTTTGAGGAAGTTAACAAAGAGATGGTTTCGAGAAAGGAAACACTTGCAGGAGCA 2207 |||||||| || ||||| ||||||||||||||| |||||||| |||||||||||||||| Sbjct 2208 GAGAAGTTGGAAGAAGTAAACAAAGAGATGGTTGAGAGAAAGGCAACACTTGCAGGAGCA 2267 Query 2208 ATGGAGAAGGCTGAGAAGGCTAAAGAAGGGAAGTTGGGTGTAGAGCAAGAACTGAGAAAA 2267 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 2268 ATGGAGAAGGCTGAGAAGGCTAAAGAAGGGAAGTTGGGTGTAGAACAAGAGCTGAGAAAA 2327 Query 2268 TGGAGGGAAGAAAGTGaaaaaaaGAGAAAGAATGGTGATAATAATGGAGTGAACATAGAA 2327 |||||||||| ||||||||||||||||||||||||| | || | ||| | Sbjct 2328 TGGAGGGAAGTAAGTGAAAAAAAGAGAAAGAATGGT-AG--TA--GC------CAT-G-- 2373 Query 2328 AAGAGTCATGGAAAAAGCATTCAGGGGTCCAAGGAGAAAGAAGCTGAGACTAATG-AGTC 2386 || | ||| ||||||| ||||| |||||||||||||||||||||| || | || Sbjct 2374 --GA---A---AAA--GCATTCAAGGGTCGAAGGAGAAAGAAGCTGAGACTAGTGTA-TC 2422 Query 2387 AAACGTAACAGAAACAAATCCAATTCCACAGGCAAATCCTGTAAAGAAAAAGAAGAAACT 2446 |||| |||||||||||| ||||| ||||||| ||||||||||||||||||||||||||| Sbjct 2423 TAACGAAACAGAAACAAACCCAATCCCACAGGTAAATCCTGTAAAGAAAAAGAAGAAACT 2482 Query 2447 TTTCCCAAGATTTTTTATGTTCTTGATGAAGAAAAAGTCACATAAGTGA 2495 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2483 TTTCCCAAGATTTTTTATGTTCTTGATGAAGAAAAAGTCACATAAGTGA 2531 Score = 274 bits (148), Expect = 3e-72 Identities = 279/335 (83%), Gaps = 37/335 (11%) Strand=Plus/Plus Query 1 AGACTTTCCAATTGTGTACCTCTCTTTTCATGTCTTCTTAATCGGAAAATCAATAattct 60 ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 5 AGACTTTCCAATTGTGTACCTCTCTTTTCTTGTCTTCTTAATCAGAAAATCAATAATTCT 64 Query 61 cttctactttcttcatttttcc-tttctcttgtaagtctct-ttt-cattgattctatct 117 |||||||||||||||||||||| |||||||||||||||||| ||| |||||||||| ||| Sbjct 65 CTTCTACTTTCTTCATTTTTCCCTTTCTCTTGTAAGTCTCTCTTTTCATTGATTCTTTCT 124 Query 118 tttGGTGGTGA--T-C-TTC----GTTTTAG-AGTT-TCT---------C----TTGCTT 154 ||||||| || | | ||| ||||||| | || ||| | |||||| Sbjct 125 ATTGGTGGCGAGCTTCGTTCAATCGTTTTAGCATTTCTCTTGTAAGTTTCGGCCTTGCTT 184 Query 155 TCCTCCAATGGAGGATTTGAAAACAACAGATGCAGTATCTCCTCCAGAAGATTCTAGTGT 214 |||||| ||||||||||||||||||||||| ||| |||||| ||||| | || |||| Sbjct 185 TCCTCCGATGGAGGATTTGAAAACAACAGACGCACTATCTCTTCCAGTTG-TT--AGTG- 240 Query 215 TATTAGTAATGGTCGCATAATAGAGCCTGAGTTGCATC-AGCCTCAAGCAATACCAACAA 273 || | | |||| | |||||||||||||||||||| | | |||||||||||||||||| Sbjct 241 -AT-A--A-TGGTGGAATAATAGAGCCTGAGTTGCAGCTA-CCTCAAGCAATACCAACAG 294 Query 274 AACTAGAGAATAATGACGAAGAAAATGGGAAAATT 308 |||| ||||||||||| ||||||||||||| |||| Sbjct 295 AACTTGAGAATAATGAAGAAGAAAATGGGACAATT 329 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 123812015324 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5