BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491382 Length=1667 Score E Sequences producing significant alignments: (Bits) Value AT4G33060.1 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-... 2584 0.0 > AT4G33060.1 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein | chr4:15948490-15952223 FORWARD LENGTH=1829 Length=1829 Score = 2584 bits (1399), Expect = 0.0 Identities = 1571/1653 (95%), Gaps = 16/1653 (1%) Strand=Plus/Plus Query 1 GAGATGTCGACGGTGTACGTGCTAGAGCCGCCGACAAAGGGAAAGGTCATTGTAAATACA 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 43 GAGATGTCGACGGTGTACGTGCTAGAGCCGCCGACAAAGGGAAAGGTCATTGTAAATACT 102 Query 61 ACTCATGGTCCAATCGACGTCGAGCTATGGCCTAAGGAAGCGCCTAAATCCGTACGGAAC 120 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct 103 ACTCATGGTCCAATCGACGTCGAGCTTTGGCCTAAGGAAGCGCCCAAATCCGTACGGAAC 162 Query 121 TTCGTTCAACTATGTCTCGAGGGTTACTTCGACAACACCATCTTCCACCGTGTTATTCCC 180 |||||||||||||| |||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct 163 TTCGTTCAACTATGCCTCGAGGGTTACTTTGACAACACCATCTTCCATCGTGTCATTCCC 222 Query 181 GGTTTTCTCGTTCAAGGCGGCGATCCCACCGGCTCCGGCACTGGTGGAGAGAGTATATAT 240 |||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||| Sbjct 223 GGTTTTCTCGTTCAAGGCGGCGATCCCACCGGCTCCGGAACCGGTGGAGATAGTATATAT 282 Query 241 GGAGGTGTCTTTGCCGATGAATTCCATTCAAGATTGAGATTTAACCACCGTGGGATTGTA 300 |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| Sbjct 283 GGAGGTGTCTTTGCCGATGAGTTCCATTCAAGGCTGAGATTTAGCCACCGTGGGATTGTT 342 Query 301 GCCATGGCTAATGCGAGCTCACCGAATTCTAATGGAAGTCAGTTCTTTTTCACTTTGGAT 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 343 GCCATGGCTAATGCGAGCTCACCTAATTCTAATGGAAGTCAGTTCTTTTTCACTTTGGAT 402 Query 361 AAGTCTGATTGGCTTGATAAGAAGCACACTATCTTTGGCAAGGTGACGGGCGATTCAATC 420 |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 403 AAGTGTGATTGGCTTGATAAGAAGCACACTATCTTTGGCAAGGTAACGGGCGATTCAATC 462 Query 421 TACAATCTTTTAAGACTAGGAGAGGTTGACACGAGTAAGGATGATCGGCCACTAGATCCT 480 ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||| Sbjct 463 TACAATCTTTTAAGACTAGGAGAGGTTGACACGAGTAAGGATGATCGACCTCTGGATCCT 522 Query 481 GCCCCGAAAATATTATCTGTTGAGGTTTTGTGGAACCCGTTCGAAGATATTGTTCCTAGA 540 || ||||||||||||||||| ||||||||||||||||| || |||||||||||||||||| Sbjct 523 GCTCCGAAAATATTATCTGTCGAGGTTTTGTGGAACCCTTTTGAAGATATTGTTCCTAGA 582 Query 541 GTGTTGA-CAAAGACATCACAAGAATCTGTTGCTGAAATCAAGGAACCTCCGAA-AAAGC 598 ||||| | ||||||||||| ||||||||| |||||||||||||||||| || || ||||| Sbjct 583 GTGTT-AGCAAAGACATCAGAAGAATCTGCTGCTGAAATCAAGGAACC-CCCAACAAAGC 640 Query 599 CCGTGAAGAAATTGAATTTACTATCATTCGGAGAAGAAGCTGAGGAAGAGGAGAAGGAAC 658 |||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct 641 CCGTGAAGAAATTGAATTTACTGTCATTCGGAGAAGAAGCTGAAGAAGAGGAAAAGGAAC 700 Query 659 TGGCTGTTGTAAAGCAAAAGATTAAGAGCAGTCATGACGTATTGAATGATCCTCGACTTT 718 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 701 TGGCTGTTGTAAAGCAAAAGATTAAGAGCAGTCATGACGTATTGAATGATCCTCGACTTT 760 Query 719 TGAAGGCAGAAGCTACAGATAAAGA-ACGGAATGCATCTGAGTCGAAGGAGGTACTATCT 777 |||||||||||||| |||||||||| | |||| ||||||||||| ||||||||||||||| Sbjct 761 TGAAGGCAGAAGCTTCAGATAAAGAGA-GGAACGCATCTGAGTCCAAGGAGGTACTATCT 819 Query 778 GTGCGAGAAGCTCTGAATACTAAGAAAGAAGCGGCTCAAAAAGATAAAAGCTTTTCTGTA 837 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 820 GTGCGAGAAGCTCTGAATGCTAAGAAAGAAGCGGCTCAAAAAGATAAAAGCTTTTCTGTA 879 Query 838 TCTGATACAGTTGGACATAGtgatgatgacgatgatgatgaagatgaGACTAAATTTGAT 897 ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct 880 TCTGATACAGTTGGAAATAGTGATGATGACGATGATGGTGAAGATGAGACTAAATTTGAT 939 Query 898 GCAAAGATGAGGAATCAAGTGCTCAGCAGAAGGAAGGAGATGGGAGACACGCCTTCAAAA 957 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 940 GCAAAGATGAGGAATCAAGTGCTCAGCAGAAGGAAGGAGATTGGAGATACGCCTTCAAAG 999 Query 958 CCAACTCAGaaaaaaaaGAGCTCTAGTCTGAAAGGCCGTGAAGAGTCTATGCAAAGGTCT 1017 || ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct 1000 CCGACTCAGAAAAAAAAGAGCTCTAGCCTGAAAGGCCGTGAAGAGTCTACGCAAAGGTCT 1059 Query 1018 GATGCTGTAAGTAGTGAAGACGAGAAACCAAGGATGGAAAAGTTATCCTTGAAGAAAAAA 1077 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 1060 GATGCTGTAAGTAGTGAAGATGAGAAACCAAGGATGGAAAAGTTGTCCTTGAAGAAAAAA 1119 Query 1078 GGAATAGGCTCAGAAGCCAAAGCCGAACATATGGAGAAAGGAGACACTGATTTACAGCTT 1137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1120 GGAATAGGCTCAGAAGCCAAAGCCGAACATATGGAGAAAGGAGACACTGATTTACAGCTT 1179 Query 1138 TACAACGCTTCTGAACGCGCCCGGCAGTTGCATAAGTTGAAAAAACGCAGACTGCAAGGA 1197 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1180 TACAACGCTTCTGAACGCGCCCGGCAGTTGCATAAGTTGAAAAAGCGCAGACTGCAAGGA 1239 Query 1198 AATGAGGATGCTGTGTTAGCAAAACTCGAGAAGTTTAAGCAGTCTATATCTGCAAAACCG 1257 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1240 AATGAGGATTCTGTGTTAGCAAAACTCGAGAAGTTTAAGCAGTCTATCTCTGCAAAACCG 1299 Query 1258 TTTACCTCGAGTAATGAACCAGTAGCGTTTACCTCGAGTAGTGAACCAGTAGACAATAAA 1317 ||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| Sbjct 1300 TTTACCTCGAGTAATGAACCAGTAGTGTTGACCTCGAGTAGTGAACCAGTTGACAATAAA 1359 Query 1318 GAAGAAGATCTCTCTGATTGGAAGAAAGTAAAGCTCAAGTTTGCTCCTGAGCGTGGCAAG 1377 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1360 GAAGAAGATCTCTCTGATTGGAAGAATGTAAAGCTCAAGTTTGCTCCTGAGCGTGGCAAG 1419 Query 1378 GATAAAATGTCGCGCAGGGATGATCCAGATGCGTATGTGGTGGTCGACCCTCTTCTTGAA 1437 ||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct 1420 GATAAAATGTCACGCAGGGATGATCCAGATGCGTATATGGTGGTTGACCCTCTTCTTGAA 1479 Query 1438 AAGGGAAAAGAGAAGTTCAACAGAATGCAAGCAAAACAAAAACGAAGGGAGCGAGAATGG 1497 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1480 AAGGGAAAAGAGAAGTTCAACAGAATGCAAGCCAAACAAAAACGAAGGGAGCGAGAATGG 1539 Query 1498 TCAGGAAAATCTCTTGCCTGAGTTTGGGAATCTTAACAATTCAAtttttttttACTTTTG 1557 || |||||||||||||||||||||||| ||||||||| ||| |||||| |||| ||| || Sbjct 1540 TCTGGAAAATCTCTTGCCTGAGTTTGGAAATCTTAACCATTTAATTTTGTTTT-CTTATG 1598 Query 1558 TTGTTTTGTTGATCCTTAAGATACCCGTTGACTGTCAAAATCTCTCCTGTTTTAAACTTA 1617 ||| ||||||||||| |||||| |||||||||||||||||||||| ||||||| Sbjct 1599 TTG--------ATCCTTAAGATGCCCGTTCACTGTCAAAATCTCTCCTGTTT-AAACTTA 1649 Query 1618 GATACATACAGAGACATGAGTGAGCATCTTAAA 1650 ||||||| ||||||||||| ||||||||||||| Sbjct 1650 GATACATTCAGAGACATGAATGAGCATCTTAAA 1682 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 82379094345 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5