BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491408
Length=3015
Score E
Sequences producing significant alignments: (Bits) Value
AT4G32880.1 | Symbols: ATHB-8, ATHB8, HB-8 | homeobox gene 8 | ... 4918 0.0
AT1G30490.1 | Symbols: PHV, ATHB9 | Homeobox-leucine zipper fam... 300 6e-80
AT5G60690.1 | Symbols: REV, IFL, IFL1 | Homeobox-leucine zipper... 122 1e-26
> AT4G32880.1 | Symbols: ATHB-8, ATHB8, HB-8 | homeobox gene 8
| chr4:15863452-15868625 REVERSE LENGTH=3023
Length=3023
Score = 4918 bits (2663), Expect = 0.0
Identities = 2907/3024 (96%), Gaps = 19/3024 (1%)
Strand=Plus/Plus
Query 1 TCTCTCTCATCCCACTACAAATCTTATATACAAGTTTCGCAAATCTTGACTCTTCACGTT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 9 TCTCTCTCATCCCACTACAAATCTTATATACAAGTTTCGCAAATCTTGACTCTTCACGTT 68
Query 61 GTGGATCTATCTAGAGAGATAAGTAAGAGAGAGGAAGAGTAAGGACGAAAGTGGTTGAAC 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 69 GTGGATCTATCTAGAGAGATAAGTAAGAGAGAGGAAGAGTAAGGAAGAAAGTGGTTGAAC 128
Query 121 TGTAGCAGCGTCTGAGGTTTGAATCTTGTAGTTCGCATTGAAGCATGCTTCACCGTTTTT 180
|||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 129 TGTAGCAGAGTCTGAGGTTTGAATCTTGTAGTTCCCATTGAAGCATGCTTCACCGTTTTT 188
Query 181 TCCGAAGGAAGTTACTCATCCACTGAGAGAGAAAGAGGGATTTGGAACTTTTGAGAGAGA 240
||||||||||||||||||||||||||||||||||||||||||||| | || |||||
Sbjct 189 TCCGAAGGAAGTTACTCATCCACTGAGAGAGAAAGAGGGATTTGG-A-----GATAGAGA 242
Query 241 AACAAATTTCTCAGATGGGTTTGTGAGAATTCACAGCGAA-AGCAAGAAACTTCTATATC 299
|| |||||||||||||||||||||||||||||||||| || ||||||||||| |||||||
Sbjct 243 AAGAAATTTCTCAGATGGGTTTGTGAGAATTCACAGC-AAGAGCAAGAAACTCCTATATC 301
Query 300 TTCCTTTGCTTCCAGAGACCAGCTTGATCAGAAACAAATA-TTCTACGGTATCTAAAA-C 357
||||||||||||||||||||||| |||||| ||||||||| || ||||| | | ||||
Sbjct 302 TTCCTTTGCTTCCAGAGACCAGCGTGATCAAAAACAAATATTTTTACGG-AAC-AAAATT 359
Query 358 AAATAGAGAGATCAGAGAGGATCAAAGAT--G-GGAGGAAGCAATAATAGTCACAATATT 414
||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 360 AAATAGAGAGATCGGAGAGGATCAAAGATGGGAGGAGGAAGCAATAATAGTCACAATATG 419
Query 415 GACAACGGGAAGTACGTGAGGTACACTCCTGAACAAGTGGAAGCTCTGGAGAGACTCTAC 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 GACAACGGGAAGTACGTGAGGTACACTCCTGAACAAGTGGAAGCTCTGGAGAGACTCTAC 479
Query 475 AATGACTGTCCTAAACCGAGCTCTATGCGCCGCCAGCAACTGATCCGGGAATGTCCTATC 534
||||||||||||||||||||||||||||||||||| || || ||||| ||||||||||||
Sbjct 480 AATGACTGTCCTAAACCGAGCTCTATGCGCCGCCAACAGCTAATCCGCGAATGTCCTATC 539
Query 535 CTCTCCAACATCGAGCCTAAACAGATAAAAGTCTGGTTCCAGAACCGCAGGTGTAGAGAA 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 CTCTCCAACATCGAGCCTAAACAGATAAAAGTCTGGTTCCAGAACCGCAGGTGTAGAGAA 599
Query 595 AAACAGCGGAAAGAGGCGTCTCGACTTCAAGCTGTGAATCGGAAGCTAACGGCAATGAAC 654
|||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct 600 AAACAGCGAAAAGAGGCGTCACGACTTCAAGCTGTGAATAGGAAGCTAACGGCAATGAAC 659
Query 655 AAGCTTTTGATGGAAGAGAATGACCGCTTGCAAAAGCAAGTGTCTCACTTGGTTTACGAG 714
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 660 AAGCTTTTGATGGAAGAGAATGACCGCTTGCAAAAGCAAGTGTCTCACTTGGTTTATGAG 719
Query 715 AACAGCTATTTTCGCCAACATCCTCAAAACCAGGGGAATTTGGCCACCACGGATAATAGC 774
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||
Sbjct 720 AACAGCTATTTTCGCCAACATCCTCAAAACCAGGGGAATTTGGCTACCACAGATACTAGC 779
Query 775 TGTGAGTCAGTGGTGACGAGTGGTCAACACCACTTGACCCCTCAACATCAGCCTCGTGAT 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 780 TGTGAGTCAGTGGTGACGAGTGGTCAACACCACTTGACCCCTCAACATCAGCCTCGTGAT 839
Query 835 GCTAGCCCTGCTGGATTATTGTCCATTGCGGATGAAACTTTAACAGAGTTCATTTCTAAG 894
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 840 GCTAGTCCTGCTGGATTATTGTCCATTGCGGATGAAACTTTAACAGAGTTCATTTCCAAG 899
Query 895 GCCACTGGAACCGCTGTCGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCC 954
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 GCGACTGGAACCGCTGTCGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCC 959
Query 955 ATAGGAATCGTTGCTATTTCTCACGGATGCACGGGAATCGCAGCCCGTGCTTGCGGCCTT 1014
||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||
Sbjct 960 ATAGGAATCGTTGCTATTTCTCATGGATGCACGGGAATCGCTGCTCGTGCTTGCGGCCTT 1019
Query 1015 GTGGGTCTTGATCCCACAAGGGTCGCGGAGATCCTAAAGGATAAGCCTTGTTGGTTGCGT 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1020 GTGGGTCTTGATCCCACAAGGGTCGCGGAGATCCTAAAGGATAAGCCTTGTTGGTTGCGT 1079
Query 1075 GATTGCAGATCTCTAGATATTGTTAACGTACTCTCCACTGCAAATGGTGGAACCCTTGAA 1134
|||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 1080 GATTGCAGATCTCTGGATATAGTTAACGTACTATCCACTGCAAATGGTGGAACCCTTGAA 1139
Query 1135 CTAATCTACATGCAGTTTTACGCGCCGACAACATTGGCGCCAGCTCGTGACTTCTGGATG 1194
||||||||||||||| |||| |||||||||||| |||| |||||||||||||||||||||
Sbjct 1140 CTAATCTACATGCAGCTTTATGCGCCGACAACACTGGCACCAGCTCGTGACTTCTGGATG 1199
Query 1195 CTACGTTACACATCTGTAATGGAAGACGGGAGCCTTGTGATATGCGAACGCTCGTTGAAC 1254
|||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 1200 CTACGTTACACATCTGTAATGGAAGACGGGAGCCTTGTGATATGCGAACGATCACTGAAC 1259
Query 1255 AATACACAAAACGGGCCAAGTATGCCTCCGTCTCCTCATTTCGTTAGAGCAGAGATTCTA 1314
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 1260 AATACACAAAACGGGCCAAGTATGCCTCCGTCTCCTCATTTCGTTAGGGCAGAGATTTTA 1319
Query 1315 CCAAGTGGTTACCTCATTAGACCCTGCGAAGGAGGTGGATCCATTCTTCACATTGTTGAT 1374
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 1320 CCAAGTGGTTACCTCATTAGACCTTGCGAAGGAGGTGGATCCATTCTTCACATTGTCGAT 1379
Query 1375 CATTTCGATCTTGAGCCATGGAGTGTGCCCGAAGTTCTTCGTTCTCTCTATGAGTCGTCC 1434
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 1380 CATTTCGATCTTGAGCCATGGAGTGTGCCAGAAGTTCTTCGTTCTCTCTATGAGTCCTCC 1439
Query 1435 ACGTTACTCGCCCAAAGAACCACCATGGCCGCTCTGCGCTATTTGAGGCAAATATCTCAA 1494
|| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 1440 ACTTTACTCGCCCAAAGAACTACAATGGCCGCTCTGCGCTATTTGAGGCAAATATCTCAA 1499
Query 1495 GAGATTTCACAACCTAACGTAACAGGTTGGGGAAGAAGACCAGCGGCTCTTAGAGCACTT 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1500 GAGATTTCACAACCTAACGTAACAGGTTGGGGAAGAAGACCAGCGGCTCTTAGAGCACTT 1559
Query 1555 AGCCAAAGGCTCAGCAAAGGATTCAACGAAGCAGTTAATGGGTTCAGCGATGAAGGATGG 1614
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1560 AGCCAAAGGCTTAGCAAAGGATTCAACGAAGCAGTGAATGGGTTCAGCGATGAAGGATGG 1619
Query 1615 TCCATCCTAGAGAGCGATGGTATCGATGATGTCACTCTTCTTGTGAACTCCTCTCCCACA 1674
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1620 TCCATCCTAGAGAGTGATGGTATCGATGATGTCACTCTTCTTGTGAACTCCTCTCCCACA 1679
Query 1675 AAGATGATGATGACTTCAAGTCTTCCATTTGCCAATGGCTTCACTTCTATGCCTAGTGCG 1734
||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||
Sbjct 1680 AAGATGATGATGACTTCAAGTCTCCCATTTGCCAATGGCTACACTTCTATGCCTAGCGCG 1739
Query 1735 GTCTTATGTGCCAAAGCTTCCATGCTATTACAAAATGTTCCACCCTCAATTCTTCTGCGG 1794
|||||||||||||||||||||||| ||||||||||||||||||| || ||||| ||||||
Sbjct 1740 GTCTTATGTGCCAAAGCTTCCATGTTATTACAAAATGTTCCACCTTCGATTCTGCTGCGG 1799
Query 1795 TTCTTGAGGGAACATAGGCAAGAATGGGCAGACAATAGCATCGATGCATACTCGGCCGCA 1854
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 1800 TTCTTGAGGGAACATAGACAAGAATGGGCAGACAATAGCATCGATGCATATTCGGCCGCA 1859
Query 1855 GCCATCAAAGCAGGCCCTTGTAGCTTACCAATCCCTCGCCCAGGGAGCTTTGGTGGTCAA 1914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1860 GCCATCAAAGCAGGCCCTTGTAGCTTACCAATCCCTCGCCCAGGGAGCTTTGGTGGTCAA 1919
Query 1915 GTCATTCTTCCTCTAGCTCACACTATAGAGAATGAAGAGTTTATGGAAGTGATTAAGCTT 1974
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1920 GTCATTCTTCCTCTAGCTCACACTATAGAGAATGAAGAGTTTATGGAAGTCATTAAGCTT 1979
Query 1975 GAGAGCTTGGGGCACTACCAAGAAGACATGATGATGCCTGCTGATATCTTCCTTCTGCAA 2034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1980 GAGAGCTTGGGGCACTACCAAGAAGACATGATGATGCCTGCTGATATCTTCCTTCTGCAA 2039
Query 2035 ATGTGCAGTGGGGTGGATGAGAACGCAGTTGAATCATGCGCAGAGCTTATCTTTGCACCA 2094
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2040 ATGTGCAGTGGGGTGGATGAGAACGCAGTTGAATCATGCGCAGAGCTTATATTTGCACCA 2099
Query 2095 ATCGACGCCTCTTTCTCTGATGATGCCCCCATCATTCCTTCCGGCTTCCGCATCATTCCT 2154
|||||||| ||||||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct 2100 ATCGACGCATCTTTCTCTGATGATGCACCAATCATTCCTTCCGGTTTCCGCATCATTCCT 2159
Query 2155 CTAGATTCCAAATCAGAGGGGTTGAGTCCTAACCGAACGCTAGACCTAGCGTCGGCTCTA 2214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2160 CTAGATTCCAAATCAGAGGGGTTGAGTCCTAACCGAACGCTAGACCTAGCGTCGGCTCTA 2219
Query 2215 GACGTAGGGAGCAGAACAGCCGGAGATTCATGTGGAAGCAGAGGGAACTCAAAGTCCGTG 2274
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2220 GACGTAGGGAGCAGAACAGCCGGAGATTCATGTGGAAGCAGAGGAAACTCAAAGTCCGTT 2279
Query 2275 ATGACTATAGCGTTTCAGCTAGCTTTTGAGATGCATATGCAAGAAAACGTAGCTTCCATG 2334
|||||||||||||||||||||||||||||||||||||||||||| || ||||| || |||
Sbjct 2280 ATGACTATAGCGTTTCAGCTAGCTTTTGAGATGCATATGCAAGAGAATGTAGCCTCAATG 2339
Query 2335 GCTAGACAATATGTAAGAAGTGTGATCGCGTCGGTTCAACGGGTCGCACTTGCTCTCTCT 2394
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2340 GCTAGACAGTATGTAAGAAGTGTGATCGCGTCGGTTCAACGGGTCGCACTTGCTCTCTCT 2399
Query 2395 CCTTCCTCTCATCAGCTAAGTGGCTTGCGTCCTCCACCCGCGTCACCGGAAGCTCATACC 2454
||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 2400 CCTTCTTCTCATCAGCTAAGTGGCTTGCGTCCTCCACCCGCGTCACCCGAAGCTCACACT 2459
Query 2455 CTCGCTCGCTGGATCTCTCACTCCTATAGATGTTACCTTGGCGTTGATCTCCTTAAACCT 2514
||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||
Sbjct 2460 CTCGCTCGCTGGATCTCTCACTCTTATAGATGTTACCTTGGCGTTGATCTTCTCAAACCT 2519
Query 2515 CATGGAACCGATCTTCTCAAGTCTCTTTGGCACCATCCTGACGCCGTCATGTGTTGCTCA 2574
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2520 CATGGAACTGATCTTCTCAAGTCTCTTTGGCACCATCCTGACGCTGTCATGTGTTGCTCA 2579
Query 2575 CTCAAGGCCTTAGCGCCGGTATTCACATTTGCGAACCAAGCTGGTTTAGACATGCTGGAG 2634
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2580 CTCAAGGCCTTATCTCCGGTATTCACATTTGCGAACCAAGCTGGTTTAGACATGCTGGAG 2639
Query 2635 ACGACGTTGGTGGCACTTCAAGATATCACTCTCGACAAGATCTTCGACAACAACAACGGG 2694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2640 ACGACGTTGGTGGCACTTCAAGATATCACTCTCGACAAGATCTTCGACAACAACAACGGG 2699
Query 2695 AAGAAGACTTTATGCTCCGATTTCCCTCAGATCATGCAACAGGGGTTTATGTGTATGGAT 2754
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2700 AAGAAGACTTTATCCTCCGAATTCCCTCAGATCATGCAACAGGGGTTTATGTGTATGGAT 2759
Query 2755 GGAGGAATATGCATGTCAAGCATGGGAAGAGCAGTAACGTACGAGAAGGCTGTTGCATGG 2814
||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct 2760 GGAGGAATATGCATGTCGAGCATGGGAAGAGCAGTAACGTACGAGAAGGCTGTTGGGTGG 2819
Query 2815 AAAGTGTTGAACGACGACGAAGATGCTCATTGTATCTCCTTCATGTTCCTCAACTGGTCT 2874
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct 2820 AAAGTGTTGAACGACGACGAAGATCCTCATTGTATCTGCTTCATGTTCCTCAACTGGTCT 2879
Query 2875 TTTATATGAAATTTTTTCCAAGTTTTTCCTTAATTATCAAAACACAGCCCtttttttCCA 2934
||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 2880 TTTATATGACCTTTTTTCCATGTTTTTCCTTAATTATCAAAACACAGACCTTTTTTTCCG 2939
Query 2935 GAGATATATTTATATATACTCTTAACTCTTAGTTAATTTGTATTTAGTTAT--CATCTCT 2992
|||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 2940 GAGATATATTTATATATACTCTTA-CTCTTAGTTAATTTGTATTTAGTTATATCATCTCT 2998
Query 2993 AATTT-GAAAGAATTTATTTACTT 3015
||||| ||||||||||| ||||||
Sbjct 2999 AATTTTGAAAGAATTTACTTACTT 3022
> AT1G30490.1 | Symbols: PHV, ATHB9 | Homeobox-leucine zipper family
protein / lipid-binding START domain-containing protein
| chr1:10796135-10800961 REVERSE LENGTH=2936
Length=2936
Score = 300 bits (162), Expect = 6e-80
Identities = 613/820 (75%), Gaps = 74/820 (9%)
Strand=Plus/Plus
Query 420 CGGGAAGTACGTGAGGTACACTCCTGAACAAGTGGAAGCTCTGGAGAGACTCTACAATGA 479
||| |||||||| || ||||| || |||||||| |||||||| |||||| | || |||
Sbjct 274 CGGCAAGTACGTTAGATACACGCCGGAACAAGTTGAAGCTCTTGAGAGAGTTTATGCTGA 333
Query 480 CTGTCCTAAACCGAGCTCTATGCGCCGCCAGCAACTGATCCGGGAATGTCCTATCCTCTC 539
||||||||||| |||||| || | | || || || || || |||||||| || ||||
Sbjct 334 GTGTCCTAAACCTAGCTCTCTGAGAAGACAACAGCTTATTCGTGAATGTCCCATTCTCTG 393
Query 540 CAACATCGAGCCTAAACAGATAAAAGTCTGGTTCCAGAACCGCAGGTGTAGAGAAAAACA 599
|||||||||||| |||||| ||||| ||||||||||| ||||| ||| |||| || ||
Sbjct 394 TAACATCGAGCCTCGACAGATCAAAGTTTGGTTCCAGAATCGCAGATGTCGAGAGAAGCA 453
Query 600 GCGGAAAGAGGC-GTCTCGACTTCAAG-CTGTGAATC-GGAAGCTAACG-GCAATGAACA 655
| |||||||| | | |||| |||| || | ||||| | ||||||| | | || |||||||
Sbjct 454 GAGGAAAGAGTCAG-CTCGTCTTC-AGACAGTGAA-CAGGAAGCTGA-GTGCTATGAACA 509
Query 656 AGCTTTTGATGGAAGAGAATGACCGCTTGCAAAAGCAAGTGTCTCA-CTTGGTTTACGAG 714
|||||||||||||||||||||| || ||||| |||||||| || || ||||||||| |||
Sbjct 510 AGCTTTTGATGGAAGAGAATGATCGTTTGCAGAAGCAAGTCTC-CAACTTGGTTTATGAG 568
Query 715 AACAGCTATTT-TCGCCAACATCCTCAAAAC-CAGGGGAATT-TGGC-C-ACCACGGATA 769
|| | ||| | | |||||| || | || | || ||| | ||||| || |
Sbjct 569 AATGG--ATTCAT-GA-AACATCG--AATCCACACTGC--TTCTGGGACGACCACAGACA 620
Query 770 ATAGCTGTGAGTCAGTGGT-GACGAGTGGTCAACA-C--CA-CTTG-ACC-CCTCAACA- 821
| ||||||||||| ||||| | ||||||||| || | || | | | || |||||
Sbjct 621 ACAGCTGTGAGTCTGTGGTCGT-GAGTGGTCAGCAACGTCAGCA-GCAAAACC-CAACAC 677
Query 822 -TCAGC--C-TC-G--TGATGCTAGC--CCT-GCTGGATTATTGTC-C-ATTGCGGATGA 869
||||| | || | ||||| || | || ||| || || || | |||||||| ||
Sbjct 678 ATCAGCATCCTCAGCGTGATGTTAACAACCCAGCTA-ATC-TTCTCTCGATTGCGGAGGA 735
Query 870 AACTTTAACAGAGTTCATTT-CTAAGGCCACTGGAACCGCTGTCGAGTGGGTCCAAATGC 928
|| || | |||||| ||| | ||||| || ||||| |||||||| |||||||| |||
Sbjct 736 GACCTTGGCGGAGTTCCTTTGC-AAGGCTACAGGAACTGCTGTCGACTGGGTCCAGATGA 794
Query 929 CTGGGATGAAGCCTGGTCCGGATTCCATAGGAATCGTTGCTATTTCTCACGGA--TGCAC 986
|||||||||||||||||||||||| || || ||||| ||| |||| ||| | ||||
Sbjct 795 TTGGGATGAAGCCTGGTCCGGATTCTATTGGTATCGTAGCTGTTTC--ACGCAACTGCA- 851
Query 987 G-GGAATCGCAGCCCGTGCTTGCGGCCTTGTGGGTCTT-GATCCCAC-AAGGGTCGCGGA 1043
| ||||| ||||| ||||| || ||||| ||| || || || |||| |||| |||| ||
Sbjct 852 GTGGAATAGCAGCACGTGCCTGTGGCCTCGTGAGT-TTAGAACCCATGAAGG-TCGCTGA 909
Query 1044 GATCCT-AAAGGATAAG-CCTTGTTGGTTGCGTGATTG-CAGATCTCTAGATATTGTTAA 1100
||||| |||| || | || | |||||| ||||| || | ||| | | || | | | ||
Sbjct 910 AATCCTCAAAG-ATC-GTCCATCTTGGTTCCGTGACTGTC-GATGTGTCGAGACTCTGAA 966
Query 1101 CGT-ACT-CTCCACTGCAAATGGTGGAACCCTTGAACTAATCTACA-TGCAGTTTTACGC 1157
|| | | | |||||| ||||||||| || | || || || ||| | ||| |||| ||
Sbjct 967 TGTTA-TAC-CCACTGGAAATGGTGGTACTATCGAGCTTGTCAACACT-CAGATTTATGC 1023
Query 1158 GCCGACAACATTGGC-GCCAGCTCGTGACTTCTGGATGCT 1196
|| |||||||| || || |||||||||||| |||| |||
Sbjct 1024 TCCTACAACATTAGCAGC-AGCTCGTGACTTTTGGACGCT 1062
> AT5G60690.1 | Symbols: REV, IFL, IFL1 | Homeobox-leucine zipper
family protein / lipid-binding START domain-containing protein
| chr5:24397023-24402195 FORWARD LENGTH=3502
Length=3502
Score = 122 bits (66), Expect = 1e-26
Identities = 185/243 (76%), Gaps = 6/243 (2%)
Strand=Plus/Plus
Query 837 TAGCCCTGCTGGATTATTGTCCATTGCGGATGAAACTTTAACAGAGTTCATTTCTAAGGC 896
||| ||||||||||| | || || || || || ||||| |||||||| | || |||||
Sbjct 1170 TAGTCCTGCTGGATTGCTCTCAATCGCAGAGGAGACTTTGGCAGAGTTCCTATCCAAGGC 1229
Query 897 CACTGGAACCGCTGTCGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCAT 956
|| ||||| ||||| || ||||| || ||||||||||||||||||||||||||||| |
Sbjct 1230 TACAGGAACTGCTGTTGATTGGGTTCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGT 1289
Query 957 AGGAATCGTTGCTATTTCTCACGGATGCACGGGAATCGCAGCCCGTGCTTGCGGCCTTGT 1016
|| ||| |||| ||||| || |||||| ||| | ||||| || || || || |||||
Sbjct 1290 TGGCATCTTTGCCATTTCGCAAAGATGCAATGGAGTGGCAGCTCGAGCCTGTGGTCTTGT 1349
Query 1017 GGGTCTT-GATCCCAC-AAGGGTCGCGGAGATCCT-AAAGGATAAGCCTTGTTGGTTGCG 1073
| ||| || || | ||| | || |||||||| |||| || ||| | |||||| ||
Sbjct 1350 TAG-CTTAGAACCTATGAAGATT-GCAGAGATCCTCAAAG-ATCGGCCATCTTGGTTCCG 1406
Query 1074 TGA 1076
|||
Sbjct 1407 TGA 1409
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 149898825684
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5