BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491410 Length=723 Score E Sequences producing significant alignments: (Bits) Value AT4G32860.1 | Symbols: | unknown protein; Has 46 Blast hits to... 1131 0.0 > AT4G32860.1 | Symbols: | unknown protein; Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:15856611-15857359 REVERSE LENGTH=749 Length=749 Score = 1131 bits (612), Expect = 0.0 Identities = 689/726 (95%), Gaps = 5/726 (1%) Strand=Plus/Plus Query 1 CTCTCTCTcacacacacatacacacaTGCAAATACACGACGACATGGAGGTTTGTTCAAC 60 ||||||||| | |||||| |||| ||||||||||||||||||||||||||||| ||||| Sbjct 26 CTCTCTCTCCCTCACACACGCACATATGCAAATACACGACGACATGGAGGTTTGCTCAAC 85 Query 61 AGTCACGACGAAGAAGCTCTCAAGCCTGGCCAAGCTAGTCCTCTTCACCATCCAGAAGGT 120 |||||| |||||||||||||||||||||||||||||| | ||||||||||| |||||||| Sbjct 86 AGTCACAACGAAGAAGCTCTCAAGCCTGGCCAAGCTAATTCTCTTCACCATACAGAAGGT 145 Query 121 TTCAGACGCCTCACGTCATAAACTCCTCACAACCCTCGATCCACATCTACTCGCTAAACG 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct 146 TTCAGACGCCTCACGTCACAAACTCCTCACAACCCTCGATCCACATCTACTCGCGAAACG 205 Query 181 TGGCAAGATCCTACGCAAATCCCTAAACGACGCCGTCTCAACCTCTCACTCACGCATCAC 240 |||||||||||||||||||||| ||||||| ||||| |||||||| |||||||||||||| Sbjct 206 TGGCAAGATCCTACGCAAATCCTTAAACGAAGCCGTTTCAACCTCCCACTCACGCATCAC 265 Query 241 GTGCCGTCCTTCCGACCACCAAGATGTCCGATCATCCTTCATCTCCCCTGTCCCGCTCCA 300 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 266 GTGCCGTCCTTCCGACCACCAAGATGTGCGATCATCCTTCATCTCCCCTGTCCCGCTCCA 325 Query 301 GCTAGAGTACGAGTTCAGCTGCAGCAGCACCCCACCGAGACCTTCCTACGCCACCACCGT 360 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 326 GCTAGAGTACGAGTTCAGCTGCAGCAGCACCCCACCGAGACGTTCCTACGCCACCACCGT 385 Query 361 AAGCAAAGGGCGACGTAGTAACGGGTCTCACAACAAACCGCTCATCAACAAGCGCCAACG 420 ||||||||| |||||||||||||| ||||| |||| |||||||||||||||||||||||| Sbjct 386 AAGCAAAGGACGACGTAGTAACGGATCTCATAACAGACCGCTCATCAACAAGCGCCAACG 445 Query 421 CCAAGCGTATATCCGGTACAACACACTTCCCAAGGTTCGTGACTCCATCTGGGACCGACA 480 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 446 CCAAGCGTATATCCGTTACAACACACTTCCCAAGGTTCGTGACTCCATCTGGGACCGACA 505 Query 481 CGT-GTCGGCGGCAGTGTTTCCCGACGTAGCAAGCAGCACCGGTACGATGGAAAGCTGCC 539 ||| | |||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct 506 CGTAG-CGGCGGCAGTATTTCCCGACGTAGCTAGCAGCACCGGTACGATGGAAAGCTGCC 564 Query 540 ATGTGGACAGAGCTGCGGAGGAGTTTATACAGAGGTTCTATAGACAGCTGAGGTTGCAGA 599 | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 565 ACGTGGACAGAGCTGCGGAGGAGTTTATACAGAGTTTCTATAGACAGCTGAGGTTGCAGA 624 Query 600 AGTGGATGATGGCTCAGGAGGTTTAAAACAGTAACTTACTTTACaaaaaatcttatggaa 659 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 625 AGTGGATGATGGCTCAGGAGGTTTAAAACAGTAACTTACTTTACGAAAAATCTTATCGAA 684 Query 660 aaaataaaa-aC-AAGTATTTTAGGTAACTTTCGTAGTCTTGTTTTGACTTTCTAATTTC 717 ||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct 685 AAA-TAAAATATTAAGTATTCTAGGTAACTTTGGTAGTCTTGTTTTGACTTTCTAATTTC 743 Query 718 TCCTTT 723 |||||| Sbjct 744 TCCTTT 749 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 35063434606 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5