BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491522
Length=1548
Score E
Sequences producing significant alignments: (Bits) Value
AT4G32120.1 | Symbols: | Galactosyltransferase family protein ... 2412 0.0
AT2G25300.1 | Symbols: | Galactosyltransferase family protein ... 1085 0.0
> AT4G32120.1 | Symbols: | Galactosyltransferase family protein
| chr4:15516784-15519855 REVERSE LENGTH=1652
Length=1652
Score = 2412 bits (1306), Expect = 0.0
Identities = 1452/1520 (96%), Gaps = 20/1520 (1%)
Strand=Plus/Plus
Query 19 TAT-ATCATCTGTTACTTGTTAGATTTGCTTTTCCTTGTTCACTTTCTCGATTTTGAATC 77
||| |||||||||||||| |||||||||||| ||||| ||||||||||| ||||||||||
Sbjct 63 TATCATCATCTGTTACTTCTTAGATTTGCTTATCCTTCTTCACTTTCTCAATTTTGAATC 122
Query 78 TGAGAATTCGtctctctgcctcctccgatctctctccctctcGCCGCGGATTGAGATGGA 137
|||||||||| || ||||||||||||||||||||||||| |||| ||||||||
Sbjct 123 TGAGAATTCG------TG---CCTCCGATCTCTCTCCCTCTCGCCGTGGATAGAGATGGA 173
Query 138 GAGCTTACCAACGACGGTCTCAGCGAAATCAGACCGGCGAGGTAGGCCTTCCAAGTCTCA 197
||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct 174 GAGCTTACCAACGACGGTCTCAGGGAAATCAGACCGGCGAGGTAGGTTTTCCAAGTCTCA 233
Query 198 GAACACCTCCAAGCCCTCTCTTATCTTGGCCTTCTTCTCCTGTCTGGCTTGGCTCTACGT 257
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 234 GAACACCTCCAAGCCCTCTCTTATCTTGGCCTTCTTCTCTTGTCTTGCTTGGCTCTACGT 293
Query 258 CGCTGGCCGGTTGTGGCAAGATGCACAGTACAGAGCAGCACTCAATACTGTGCTTAAGAA 317
|||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 294 CGCTGGCCGGTTATGGCAAGATGCGCAGTACAGAGCAGCACTCAATACTGTGCTTAAGAT 353
Query 318 GAATTATGATCAGAGGCCTAAGGTTCTTACGGTGGAGGACAAGCTGGTAGTCCTTGGATG 377
|||||||||||||||||||||||||||||||||||||||||| || || |||||||||||
Sbjct 354 GAATTATGATCAGAGGCCTAAGGTTCTTACGGTGGAGGACAAACTTGTGGTCCTTGGATG 413
Query 378 CAAAGATCTTGAGAGGAGAATTGTTGAAACTGAAATGGAGTTGGCACAGGCAAAGAGTCA 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 414 CAAAGATCTTGAGAGGAGAATTGTTGAAACTGAAATGGAGTTGGCACAGGCAAAGAGTCA 473
Query 438 AGGCTATCTTAAAAACCAGAAAAGTGTCTCTTCCTCAGGGAAGAAAATGCTTGCTGTTAT 497
||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 474 AGGCTATCTTAAAAAACAGAAAAGTGTCTCTTCTTCAGGGAAGAAAATGCTAGCTGTTAT 533
Query 498 TGGAGTTTACACAGGTTTTGGAAGTCATTTGAAGCGCAATAAATTTAGAGGCTCTTGGAT 557
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 534 TGGAGTTTACACAGGCTTTGGAAGTCACTTGAAGCGCAATAAATTTAGAGGCTCTTGGAT 593
Query 558 GCCACGAGATGATGCT-TTGAAAAAACTTGAGGAAAGAGGAGTTGTCATACGCTTTGTGA 616
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 594 GCCACGAGATGATGCTCTT-AAAAAACTTGAGGAAAGAGGAGTTGTCATACGCTTTGTGA 652
Query 617 TTGGTCGGAGTGCTAACCGAGGTGATAGCCTAGATAGGAAAATTGACGAAGAAAATCGTG 676
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 653 TTGGTCGGAGTGCTAACCGAGGTGATAGCCTAGATAGAAAAATTGACGAAGAAAATCGTG 712
Query 677 CAACTAAAGACTTTTTGATTCTTGAGAATCACGAGGAAGCCCAAGAAGAGTTACCAAAGA 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 713 CAACTAAAGACTTTTTGATTCTTGAGAATCACGAGGAAGCCCAAGAAGAGTTACCGAAGA 772
Query 737 AAGTGAAGTTCTTCTACAGTGCTGCTGTTCAGAATTGGGATGCAGAGTTTTATGTCAAAG 796
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 773 AAGTGAAGTTCTTCTACAGTGCTGCTGTTCAGAATTGGGACGCAGAGTTTTATGTCAAAG 832
Query 797 TTGATGACAACGTTGACCTAGATCTTGAGGGGATGATTGGGCTTCTTGAAAGCCGTCGTG 856
||||||||||||||||| | ||||||||||||||||||| |||||||||||| ||||||
Sbjct 833 TTGATGACAACGTTGACTTGGATCTTGAGGGGATGATTGCGCTTCTTGAAAGTCGTCGTA 892
Query 857 GTCAAGATGGTGCTTACATTGGGTGCATGAAATCTGGAGATGTGATTACTGAAGAGGGAA 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 893 GTCAAGATGGTGCTTACATTGGGTGCATGAAATCTGGAGATGTGATTACTGAAGAGGGAA 952
Query 917 GTCAATGGTATGAGCCTGAGTGGTGGAAATTTGGGGACGACAAATCGTATTTCCGTCATG 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 953 GTCAATGGTATGAGCCTGAGTGGTGGAAATTTGGGGACGACAAATCGTATTTCCGTCATG 1012
Query 977 CTACTGGTTCGCTGGTAATACTCTCCAAGAATCTGGCTCAGTATGTCAATATAAACAGTG 1036
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1013 CAACTGGTTCGCTGGTAATACTCTCAAAGAATCTGGCTCAGTATGTCAATATAAACAGTG 1072
Query 1037 GATTGTTGAAGACATATGCGTTTGATGATACCACCATTGGATCATGGATGATTGGCGTCC 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1073 GATTGTTGAAGACATATGCGTTTGATGATACCACCATTGGATCATGGATGATTGGCGTCC 1132
Query 1097 AGGCAACATATATAGACGACAATCGCCTTTGCTGCAGCAGCACAAGACAAGAAAAAGTGT 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1133 AGGCAACATATATAGACGACAATCGCCTTTGCTGCAGCAGCACAAGACAAGAAAAAGTGT 1192
Query 1157 GTTCCATGGCATGATCAATGCATAGCTGATCCTCTTGTCCCAGAGCAAAGACGACGGTTT 1216
||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||
Sbjct 1193 GTTCCATGGCATGATCACTGCATAGATGATCCTCTTGTCCCAGAGCAAAGACGGCGGTTT 1252
Query 1217 CTCATTGCATTCATGGTGCTCTGATACTCTTTTGAGGCAAATTCTTGGACCGGATACTGA 1276
||||| |||||||||| |||| |||||||||||| |||| ||||||||||||||||||||
Sbjct 1253 CTCATCGCATTCATGGCGCTCCGATACTCTTTTGGGGCAGATTCTTGGACCGGATACTGA 1312
Query 1277 ATTTA-CGATTAGTTTTGTTAGAATGGGAGTATGATTAGGCCATTCATTACAGTTTATGA 1335
| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1313 ACTTATC-ATTAGTTTTGTTAGAATGGGAGTATGATTAGGCCATTCATTACAGTTTATGA 1371
Query 1336 TTAG-GGCATGCGTATCCCTTGAGCTTTGGAGTAAGAAAATGGGGAAATGGTATAGTTGT 1394
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1372 TTAGAGGCATGCGTATCCCTTGAGCTTTGGAGTAAGAAAATGGGGAAATGGTATAGATGT 1431
Query 1395 GAAT-AAGTATAATTTTTCCTTTGGTATCACT-TCACCATCATTTGTCCGTCCATTCTAG 1452
|||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct 1432 GAATGAAGTATAATTTTTCCTTTGGTATCA-TATCACCATCATTTGTCCGTCCATTCTAG 1490
Query 1453 CTCAATCTCTGGCAAG-GTTTCATGTTCGAACCTTAAGTTTGCATTTCTGGT-GATGGTT 1510
| |||||||||||| | |||| ||||||||||||||||||||||||| |||| | |||||
Sbjct 1491 CCCAATCTCTGGCAGGCGTTTAATGTTCGAACCTTAAGTTTGCATTTTTGGTTGCTGGTT 1550
Query 1511 TTAAAAAATGTGTTAGTTAA 1530
|| |||||||||||||||||
Sbjct 1551 TTTAAAAATGTGTTAGTTAA 1570
> AT2G25300.1 | Symbols: | Galactosyltransferase family protein
| chr2:10771694-10774294 REVERSE LENGTH=1407
Length=1407
Score = 1085 bits (587), Expect = 0.0
Identities = 910/1066 (85%), Gaps = 21/1066 (2%)
Strand=Plus/Plus
Query 125 GGATTGAGATGGAGAGCTTACCAACGACGG-TCTCAGCGAAATCAGACCGGCGAGGTAG- 182
|||||||||||||||||||||| ||||||| || | | |||||||| || |||| | |
Sbjct 131 GGATTGAGATGGAGAGCTTACCCACGACGGTTC-CCTCCAAATCAGAACGACGAGCTCGT 189
Query 183 GCCTTCCAAG---TCTCAGAACACCTCCAAGCCCTCTCTTATCTTGGCCTTCTTCTCCTG 239
|| |||||| ||||||| |||| ||||| || |||| |||| |||||||| ||
Sbjct 190 TCC-TCCAAGTTTTCTCAGAGTTCCTCTAAGCCTTCGGTTATAATGGCTTTCTTCTCTTG 248
Query 240 TC-TGGCTTGGCTCTACGTCGCTGGCCGGTTGTGGCAAGATGCACAGTACAGAGCAGCAC 298
| | ||||||||||||||||||||| |||| |||||||||||| || | |||| | ||
Sbjct 249 -CGTCGCTTGGCTCTACGTCGCTGGCAGGTTATGGCAAGATGCAGAGAATAGAGTGGTAC 307
Query 299 TCAATACTGTGCTTAAGAAGAATTATGATCAGAGGCCTAAGGTTCTTACGGTGGAGGACA 358
|||||| | | |||||||||| ||||||||||| ||||||||||||||||||||| ||||
Sbjct 308 TCAATAATATACTTAAGAAGAGTTATGATCAGAAGCCTAAGGTTCTTACGGTGGATGACA 367
Query 359 AGCTGGTAGTCCTTGGATGCAAAGATCTTGAGAGGAGAATTGTTGAAACTGAAATGGAGT 418
|||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 368 AGCTTATGGTCCTAGGATGCAAAGATCTTGAGAGGAGAATTGTTGAAACTGAAATGGAGT 427
Query 419 TGGCACAGGCAAAGAGTCAAGGCTATCTTAAAAACC-AGAAAAGTG-TCTCTTCCTCAGG 476
|| | | ||| |||||||||||||||||||| ||| | ||||||| | || || |||||
Sbjct 428 TGACTCTGGCTAAGAGTCAAGGCTATCTTAAGAACTTA-AAAAGTGGT-TCGTCTTCAGG 485
Query 477 GAAGAAAATGCTTGCTGTTATTGGAGTTTACACAGGTTTTGGAAGTCATTTGAAGCGCAA 536
||||||| | |||||||| |||||||| || |||| ||||| |||||| ||| ||| ||
Sbjct 486 GAAGAAATTACTTGCTGTGATTGGAGTGTATTCAGGCTTTGGTAGTCATCTGAGGCGTAA 545
Query 537 TAAATTTAGAGGCTCTTGGATGCCACGAGATGATGCTTTGAAAAAACTTGAGGAAAGAGG 596
|| |||| |||| |||| ||||||| || ||||||||||| |||||||||||||||||
Sbjct 546 TACATTTCGAGGGTCTTATATGCCACAAGGTGATGCTTTGAGGAAACTTGAGGAAAGAGG 605
Query 597 AGTTGTCATACGCTTTGTGATTGGTCGGAGTGCTAACCGAGGTGATAGCCTAGATAGGAA 656
| |||||||||| |||||||||||||| ||| | || |||||||||||| ||||| | ||
Sbjct 606 AATTGTCATACGTTTTGTGATTGGTCGAAGTCCAAATCGAGGTGATAGCTTAGATCGAAA 665
Query 657 AATTGACGAAGAAAATCGTGCAACTAAAGACTTTTTGATTCTTGAGAATCACGAGGAAGC 716
||| ||||| ||||||| |||| ||||| |||||||||||||||||||| ||||| ||
Sbjct 666 AATCGACGAGGAAAATCAAGCAAGAAAAGATTTTTTGATTCTTGAGAATCATGAGGAGGC 725
Query 717 CCAAGAAGAGTTA-CCAAAGAAAGTGAAGTTCTTCTACAGTGCTGCTGTTCAGAATTGGG 775
|||||||||| || |||| ||||||||||||||||| |||||||||||||| || ||||
Sbjct 726 CCAAGAAGAGCTAGCCAA-GAAAGTGAAGTTCTTCTTTAGTGCTGCTGTTCAAAACTGGG 784
Query 776 ATGCAGAGTTTTATGTCAAAGTTGATGACAACGTTGACCTAGATCTTGAGGGGATGATTG 835
||||||||||||| |||||||||||||||| ||||| |||||||||||||| ||||||
Sbjct 785 ATGCAGAGTTTTACATCAAAGTTGATGACAATATTGACTTAGATCTTGAGGGGTTGATTG 844
Query 836 GGCTTCTTGAAAGCCGTCGTGGTCAAGATGGTGCTTACATTGGGTGCATGAAATCTGGAG 895
| ||||||||||| || ||||||||||||| ||||||||||||||| ||||| ||||| |
Sbjct 845 GCCTTCTTGAAAGTCGGCGTGGTCAAGATGCTGCTTACATTGGGTGTATGAAGTCTGGTG 904
Query 896 ATGTGATTACTGAAGAGGGAAGTCAATGGTATGAGCCTGAGTGGTGGAAATTTGGGGACG 955
| ||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||
Sbjct 905 AAGTGGTTGCTGAAGAGGGAGGGAAATGGTATGAGCCAGAATGGTGGAAATTTGGGGACG 964
Query 956 ACAAATCGTATTTCCGTCATGCTA-CTGGTTCGCTGGTAATACTCTCCAAGAA-TCTGGC 1013
| |||||||| ||||||||||| | ||||||||||| ||||||| ||||| || | ||||
Sbjct 965 AAAAATCGTACTTCCGTCATGC-AGCTGGTTCGCTGTTAATACTATCCAA-AACTTTGGC 1022
Query 1014 TCAGTATGTCAATATAAACAGTGGATTGTTGAAGACATATGCGTTTGATGATACCACCAT 1073
||||||||| || ||||||||||||| |||||||||||||| |||||||||||| | ||
Sbjct 1023 TCAGTATGTAAACATAAACAGTGGATCATTGAAGACATATGCATTTGATGATACCTCTAT 1082
Query 1074 TGGATCATGGATGATTGGCGTCCAGGCAACATATATAGACGACAATCGCCTTTGCTGCAG 1133
||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||||
Sbjct 1083 AGGATCTTGGATGATTGGTGTTCAGGCAACTTATATAGACGACAATCGCCTTTGCTGCAG 1142
Query 1134 CAGCA-CAAGACAAGAAAAAGTGTGTTCCATGGCATGATCAATGCA 1178
||||| || ||||||| || |||||||| |||| ||| ||| |||
Sbjct 1143 CAGCATCA-GACAAGACAAGGTGTGTTCTGTGGCTTGAGCAAAGCA 1187
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76405229490
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5