BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491523 Length=534 Score E Sequences producing significant alignments: (Bits) Value AT4G32105.1 | Symbols: | Beta-1,3-N-Acetylglucosaminyltransfer... 704 0.0 AT4G32110.1 | Symbols: | Beta-1,3-N-Acetylglucosaminyltransfer... 520 7e-147 > AT4G32105.1 | Symbols: | Beta-1,3-N-Acetylglucosaminyltransferase family protein | chr4:15513220-15514087 REVERSE LENGTH=626 Length=626 Score = 704 bits (381), Expect = 0.0 Identities = 492/543 (91%), Gaps = 18/543 (3%) Strand=Plus/Plus Query 1 AAACGCCTCCCGATAAATACCCAACATCACATTCGAGCACCCATACTCTCATAGTGACTA 60 |||||||| || ||||||||||||||||||||| | ||||||||| | | | |||| Sbjct 31 AAACGCCTGCCTATAAATACCCAACATCACATTTGGGCACCCATA----C-T--T-ACTA 82 Query 61 CG-TTTCCAAATTTCGTCTTTGATAAAACTCGAAAG----TCAGACAATGGCATCAAACG 115 || |||||||||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct 83 CGTTTTCCAAATTTCATCTTTGCTAAAACTCGAAAGAATATCAGACAATGGCATCAAACG 142 Query 116 CTTGCAAACTCATTTGCCTTGTTCTCTTCTTCGCATTCATTAACCAAGGGTATGGAGATT 175 |||||||| || ||||||||||||||||| |||||||| |||||||||||||||| |||| Sbjct 143 CTTGCAAAGTCCTTTGCCTTGTTCTCTTCCTCGCATTCGTTAACCAAGGGTATGGGGATT 202 Query 176 GTCATCTAAATGACCTATCTGTGAAACAGTCGAAGACCGGAAAATTGATTCAGAACAAAC 235 ||||||||||| |||||||||||||||| || || |||||||||||| ||||||| |||| Sbjct 203 GTCATCTAAATTACCTATCTGTGAAACAATCAAAAACCGGAAAATTGGTTCAGAATAAAC 262 Query 236 CAGAGTGGGAAGTGAGAGTAACAAACCCTTGC-A-AA-TGCAAATTCCAATACACAAAGT 292 | ||||||||||||||||| || ||||||||| | || ||||||||||| ||||| |||| Sbjct 263 CGGAGTGGGAAGTGAGAGTGACGAACCCTTGCAACAATTGCAAATTCCAGTACACGAAGT 322 Query 293 TGTCATGTGTCGGTTTCCAATCGGTTACACCCGTCGCTACCTCGTTGTTGTCGAAATCCG 352 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 323 TGTCATGTGTCGGTTTCCAATCGGTTACACCCGTCGCTACCTCGTTGTTGTCAAAATCCG 382 Query 353 GTGAC-TTGTGTCTCCTCAACGCCGGTAAATTCATCTTTCCTCACGTGGACTTCGTTTTC 411 ||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 383 GTGACATT-TGTCTCCTCAACGCCGGTAACTTCATCTTTCCTCACGTGGACTTCGTTTTC 441 Query 412 AAATACGTTTGGGACACGAGCTTCGACCTCAAGGTTATCGACGGCGTAATCGTTTGCCCT 471 || |||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||| Sbjct 442 AATTACGTTTGGGACACAAGCTTCGACCTCAAGGTTATCGACGGCGTTATCGTTTGTCCT 501 Query 472 TAAATTTTCTAGGCGAATTGTTTCGGTTTTGGTTCATGTTAGGTAGATCACATGAAACTG 531 ||| ||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 502 TAATTTTTCTACCCGAATTGTTTCGGTTTTGGTTCATGTTAGCTAGGTCACATGAAACTG 561 Query 532 ATG 534 ||| Sbjct 562 ATG 564 > AT4G32110.1 | Symbols: | Beta-1,3-N-Acetylglucosaminyltransferase family protein | chr4:15515649-15516452 REVERSE LENGTH=539 Length=539 Score = 520 bits (281), Expect = 7e-147 Identities = 395/448 (88%), Gaps = 16/448 (4%) Strand=Plus/Plus Query 63 TTTCCAAATTTCGTCTTTGATAAAACTCGAAAG-TCA-GACAATGGCATCAAACGCTTGC 120 |||| ||||||||| ||||||||||||| |||| ||| | |||||||||||||||||||| Sbjct 4 TTTCTAAATTTCGTGTTTGATAAAACTCCAAAGATCATG-CAATGGCATCAAACGCTTGC 62 Query 121 AAAC-TCATTTGCCTTGTTCTCTTCTTCGCATTCATTAACCAAGGGTATGGAGATTGTCA 179 |||| || ||||||||||||||||||| |||||| ||||||||||||||||||||||| | Sbjct 63 AAACTTC-TTTGCCTTGTTCTCTTCTTAGCATTCGTTAACCAAGGGTATGGAGATTGT-A 120 Query 180 -TCTAAATGACCTATCTGTGAAACAGTCGAAGACCGGAAAATTGATTCAGAACAAACCAG 238 ||||||| ||||||||||||||| ||||| |||||||||||| ||||||||||||| | Sbjct 121 GTCTAAATTCCCTATCTGTGAAACAATCGAAAACCGGAAAATTGGTTCAGAACAAACCGG 180 Query 239 AGTGGGAAGTGAGAGTAACAAACCCTTGC-A-AA-TGCAAATTCCA-ATACACAAAGTTG 294 |||||||||||||||| || ||||||||| | || ||||||||||| | ||||| ||||| Sbjct 181 AGTGGGAAGTGAGAGTGACGAACCCTTGCAACAATTGCAAATTCCAGA-ACACAGAGTTG 239 Query 295 TCATGTGTCGGTTTCCAA-TCGGTTACACCCGTCGCTACCTCGTTGTTGTC-GAAATCCG 352 | |||||||||||| ||| || ||||||||| ||| ||||||||||||| | |||||| | Sbjct 240 TTATGTGTCGGTTT-CAACTCAGTTACACCCATCGATACCTCGTTGTTG-CTGAAATCTG 297 Query 353 GTGACTTGTGTCTCCTCAACGCCGGTAAATTCATCTTTCCTCACGTGGACTTCGTTTTCA 412 ||||| ||||||| ||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 298 GTGACGCGTGTCTCGTCAACGCTGGTAAATTCATAGTTCCTCACGTGGACATCGTTTTCA 357 Query 413 AATACGTTTGGGACACGAGCTTCGACCTCAAGGTTATCGACGGCGTAATCGTTTGCCCTT 472 |||||||||||||||| ||||||||||||||||||||||||||||| || |||||| || Sbjct 358 AATACGTTTGGGACACAAGCTTCGACCTCAAGGTTATCGACGGCGTTATGGTTTGCTATT 417 Query 473 AAATTTTCTAGGCGAATTGTTTCGGTTT 500 |||| ||||| | |||| ||| ||||| Sbjct 418 AAATGTTCTAACCAAATTCTTTTGGTTT 445 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 25569180823 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5