BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491646 Length=895 Score E Sequences producing significant alignments: (Bits) Value AT4G30996.1 | Symbols: | Protein of unknown function (DUF1068)... 1240 0.0 > AT4G30996.1 | Symbols: | Protein of unknown function (DUF1068) | chr4:15101295-15102684 FORWARD LENGTH=911 Length=911 Score = 1240 bits (671), Expect = 0.0 Identities = 848/925 (92%), Gaps = 46/925 (5%) Strand=Plus/Plus Query 1 GTCGTTTTACTGTAGTTTCTCCGCGTTTGGTACATC-AC-C----A-CT-TG-------- 44 ||||||||| |||||||||||||||||||||||||| || | | || || Sbjct 1 GTCGTTTTATTGTAGTTTCTCCGCGTTTGGTACATCAACACTTGTAGCTGTGTATCTTTC 60 Query 45 TAATTCTTCGTTTCTTTCGCTGACAGTGTCTT-CTTACACACTAATCACCATTGTTGCTG 103 ||||||||| |||||||||||||||||| ||| || ||||||||||| | |||||||||| Sbjct 61 TAATTCTTCCTTTCTTTCGCTGACAGTG-CTTGCTCACACACTAATCGCAATTGTTGCTG 119 Query 104 CACTT-CCGA--C----TC---CGA-TTCAGCATTTTGTTCTTCCGAAACGATGGCTCGT 152 || || |||| | || ||| |||||||||||||||||||||| ||||| ||||| Sbjct 120 CA-TTGCCGACTCTGATTCGTTCGATTTCAGCATTTTGTTCTTCCGAAGCGATGCCTCGT 178 Query 153 CGATCTGGAGATTGCATGAGATGTCTGGTGATTTTCGCGGTTGTATCAGCTTTAGTTGTG 212 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 179 CGATCCGGAGATTGCATGAGATGTCTGGTGATTTTCGCGGTTGTATCAGCTTTAGTTGTG 238 Query 213 TGTGGACCTGCTCTTTATTGGAAATTCAACAAGGGTTTCGTTGGATCCACTCGTACCAAC 272 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 239 TGTGGACCTGCTCTTTATTGGAAATTCAACAAGGGTTTCGTTGGATCCACACGTGCCAAC 298 Query 273 TCTCTTTGTCCTCCTTGCGTTTGTGATTGTCCTCCTCCTTTGTCTCTTCTCCAGATTGCT 332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 299 TCTCTTTGTCCTCCTTGCGTTTGTGATTGTCCTCCTCCTTTGTCTCTTCTCCAGATTGCT 358 Query 333 CCTGGGCTTGCAAATCTCTCTATTACAGATTGTGGAAGCGACGATCCAGAGCTCAAACAA 392 |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 359 CCTGGGCTCGCAAATCTCTCTATTACAGATTGTGGAAGCGACGATCCAGAGCTTAAACAA 418 Query 393 GAGATGGAGAAGCAATTTGTGGACCTTCTGACTGAGGAGCTGAAGCTGCAAGAAGCAGTT 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 419 GAGATGGAGAAGCAATTTGTGGACCTTCTGACTGAGGAGCTGAAGCTGCAAGAAGCAGTT 478 Query 453 GCAGATGAGCATAGCCGTCATATGAATGTTACCCTTGCAGAAGCTAAAAGGGTTGCATCT 512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 479 GCAGATGAGCATAGCCGTCATATGAATGTTACCCTTGCAGAAGCTAAAAGGGTTGCATCT 538 Query 513 CAGTACCAAAAGGAGGCTGAGAAGTGCAATGCCGCCACTGAGATTTGTGAATCAGCTAGA 572 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 539 CAGTATCAAAAGGAGGCTGAGAAGTGCAATGCCGCCACTGAGATTTGTGAATCAGCTAGA 598 Query 573 GAGAGAGCCGAAGCTTTGTTGATCAAGGAGAGGAAGATCACTTCTTTGTGGGAGAAGAGA 632 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 599 GAGAGAGCTGAAGCTTTGTTGATCAAGGAGAGGAAGATTACTTCTTTGTGGGAGAAGAGA 658 Query 633 GCTCGGCAATCAGGTTGGGAAGGTGAGTAAACTGATTGCACTTCTCAGTCTACCTTGAAG 692 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 659 GCTCGGCAATCAGGTTGGGAAGGTGAGTAAACTGATTGCACTTCTCAGTCTACCTTAAAG 718 Query 693 AGTTTCTCTCTGAGAAGTCGAATTTTCGCAACTCTACTCAAGTAAAGGAAATTGTTTAAT 752 ||||||||||||||| ||||||| || || ||||| || | |||||||||||| | Sbjct 719 TGTTTCTCTCTGAGAAATCGAATTGTCACAGCTCTA---AA--A--GGAAATTGTTTAGT 771 Query 753 TGTCAAGGCAAAGTTCTATCTTCCACGTTTCTCTATATAT-GTA-GttttttttttGTTT 810 |||||||||||||| |||||||||||||||||||||||| ||| || |||||| |||| Sbjct 772 TGTCAAGGCAAAGTCCTATCTTCCACGTTTCTCTATATACAGTATGTAGTTTTTT-GTTT 830 Query 811 TGCCCTTGGATCAGAATGTAGCTAAAGAAAGGCTTGGCCTTGTATTAACTTTTCTTCATA 870 |||||||| ||| |||||||||||||||||||| | |||||| ||||||| |||||| Sbjct 831 TGCCCTTG-ATCGGAATGTAGCTAAAGAAAGGC----C-TTGTATCAACTTTTATTCATA 884 Query 871 TATAATTGTCCATTTCTCTACCATG 895 ||||||||||||||||| ||| ||| Sbjct 885 TATAATTGTCCATTTCTTTACTATG 909 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 43703707890 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5