BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491654
Length=1799
Score E
Sequences producing significant alignments: (Bits) Value
AT4G30940.1 | Symbols: | BTB/POZ domain with WD40/YVTN repeat-... 2567 0.0
AT2G24240.1 | Symbols: | BTB/POZ domain with WD40/YVTN repeat-... 1160 0.0
> AT4G30940.1 | Symbols: | BTB/POZ domain with WD40/YVTN repeat-like
protein | chr4:15054873-15056826 FORWARD LENGTH=1954
Length=1954
Score = 2567 bits (1390), Expect = 0.0
Identities = 1582/1675 (94%), Gaps = 11/1675 (1%)
Strand=Plus/Plus
Query 129 AATCATCGATTTCACCTATATTTCATAAATAACAGATAATGGGTTTATCAAATGACAGAA 188
|||||| |||||||||||| ||||| |||| | | ||||||||||||||||||||||| |
Sbjct 240 AATCATTGATTTCACCTAT-TTTCAGAAATCAGAAATAATGGGTTTATCAAATGACAGGA 298
Query 189 TCAAATTCAACGTTGGTGGTAGAATCTTCGAAACGACGGCGACGACCCTCGCTAACGCTG 248
||||||||||||||||||| ||||||||||||||||| ||||| || ||||||||||| |
Sbjct 299 TCAAATTCAACGTTGGTGGCAGAATCTTCGAAACGACAGCGACAACGCTCGCTAACGCAG 358
Query 249 GTCGCGGTTCCTTCTTCGGAGCATTATTCGACGAAAATTGGAATCTTTCGCAACCCGACG 308
|||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 359 GTCGCGATTCCTTCTTCGGAGCATTATTCGACGAAAATTGGAATCTTTCACAACCCGGGG 418
Query 309 ATCTCTTCATCGATCGGAACCCAGATTGCTTCGCCGTTCTTCTCGATCTCCTCCGAACAG 368
|||||||||||||| |||| |||||||||||||| |||||||||||||| ||||||||||
Sbjct 419 ATCTCTTCATCGATAGGAATCCAGATTGCTTCGCTGTTCTTCTCGATCTTCTCCGAACAG 478
Query 369 GAGACCTCAACATCCCACCTAATATCCCGGAGCGTCTCCTTCACAAAGAAGCAATGTTCT 428
||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 479 GAGACTTAAACATCCCGCCTAATATCCCGGAGCGTCTCCTTCACAAAGAAGCAATGTTCT 538
Query 429 ACGGCTTAATCGACCACTTACGAACCGCAAAGTGGGGACCTTTCGACGGTAACAGACTCC 488
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 ACGGCTTAATAGACCACTTACGAACCGCAAAGTGGGGACCTTTCGACGGTAACAGACTCC 598
Query 489 ACCTCTCTCGCTCCGTCACCGGCATAGCTCCCGGAGACGGAACGGCGATAAGAGCTGGTC 548
|||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 599 ACCTATCTCGTTCCGTCACCGGCATAGCTCCTGGAGACGGAACGGCGATAAGAGCTGGTC 658
Query 549 CGGATGGCGGATGCTGTGTCGCTCACGGGAGCGTTGTCCACGTGTTTGATTGGATGCTTG 608
||||||| |||||||| | ||||| ||||| || ||||| || ||||||||||||||||
Sbjct 659 CGGATGGTGGATGCTGCATAGCTCATGGGAGTGTCGTCCATGTCTTTGATTGGATGCTTG 718
Query 609 AGGAGCATCCGACGATTAATCTTGATTACCAAAGAGTGAACGATGTGGGTTGGATTGATT 668
|||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 719 AGGAGCATCCAACGATTAATCTTGATTACCAGAGAGTGAACGATGTTGGTTGGATTGATT 778
Query 669 CCGGTAACATTGTTCTCTCTGCTTGTGAGAGATTAGGAAGAGGAGATGGAGGAATGGGAT 728
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 779 CTGGTAACATTGTACTCTCTGCTTGTGAGAGATTAGGAAGAGGAGATGGAGGAATGGGAT 838
Query 729 TGTTTAGCTCATCTTCTGGTGAGCTTAGGTATAAGTTTCAGGTGAGTCATGATAATCAGA 788
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 839 TGTTTAGCTCATCTTCTGGTGAGCTTAGGTATAAGTTTCAGGTTAGTCATGATAATCAGG 898
Query 789 TTAAGAGTTATAGTGCTGGAGCTTTGAGTTTTAGTCCTGATTCCAAGATCTTTACGAGCT 848
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 899 TTAAGAGTTATAGTGCTGGAGCTTTGAGTTTTAGTCCTGATTCTAAGATCTTTACGAGCT 958
Query 849 GCAAAGGAAGAAGCAATGAGTATGGAATTGGAGTTTGGGATCAAATTAATGGAAAGCAAC 908
| ||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||||
Sbjct 959 GTAAAGGAAGAAGTAATGAGTATGGGATTGGAGTTTGGGATCAAAGTACTGGAAAGCAAG 1018
Query 909 TAGATTTCTTTTACGAGAGTCCTGGTTGGTCTTTAGGAGATGCTGATAAGCTGCAATGGT 968
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1019 TAGATTTCTTTTACGAGAGTCCTGGTTGGTCTTTAGGAGATGCTGATAAGTTGCAATGGT 1078
Query 969 TGAGTGGTAAGAATTGCCTTCTTGTAGCTACTTTGTTTCCAAGGAAAGATAATTGTTATA 1028
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1079 TGAGTGGTAAGAATTGTCTTCTTGTAGCTACTTTGTTTCCAAGGAAAGATAACTGTTATA 1138
Query 1029 TTAGCTTGTTGGATTTCCGGGACAAGAACATGGTCTGGTCTTGGTCTGATATCGGGTTTC 1088
||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||
Sbjct 1139 TTAGCTTGTTGGATTTCCGAGAGAAGAACATGGTCTGGTCTTGGTCTGATATCGGATTTC 1198
Query 1089 TTGCAACGGCCGAGGAGAAGAGAGTGAGAGATGCGATAGCCATGGAAGAGAGCAATTCGA 1148
|| ||| ||| || ||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 1199 TTACAATGGCGGAAGAGAAGAGAGTGAGAGACGCGATAGCAATGGAAGAGAGCAATTCGA 1258
Query 1149 TTTGTGTGGTGAATGAGTTTGAGGATCTAGGGTTTATTGATCTGAGGATGGATGGAGGAG 1208
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1259 TATGTGTGGTGAATGAGTTTGAAGATCTAGGGTTTATTGATCTGAGGATGGATGGAGGAG 1318
Query 1209 GGAGTAGTGTGAGGTGGAGTTCTAGGAGCAGGTTGATGAAAAGCAAGATGCCTGATGAGC 1268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1319 GGAGTAGTGTGAGGTGGAGTTCTAGGAGCAGGTTGATGAAAAGCAAGATGCCTGATGAGC 1378
Query 1269 CTTGTTACCCTAAACTTGCTTTGCACGAAGGCCAGCTCTTCTCGTCTATGAATGATTCCA 1328
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1379 CTTGTTACCCCAAACTTGCTTTGCATGAAGGCCAGCTCTTCTCGTCTATGAATGATTCCA 1438
Query 1329 TCTCTGTGTTTTGTGGATCAGACTGGGTTTTGACTTCTAGGTTGAAAAGAAGCTATGGTG 1388
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1439 TCTCTGTGTTTTGTGGATCAGACTGGGTTTTGACTTCTAGGTTGAAAAGAAGCTATGGCG 1498
Query 1389 GCTCCATCTGTGATTTCTCCATTGGTGGGGATCGGTTGTTTGCATTGCACAGTGAGGAGA 1448
||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct 1499 GCTCCATTTGTGATTTCTCTATTGGTGGGGATAGGTTGTTTGCATTGCACAGTGAGGAGA 1558
Query 1449 ATGTGTTTGATGTGTGGGAGACTCTGCCTCCTCCCATCATCTGATTTCACATTTTGCAAA 1508
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 1559 ATGTGTTTGATGTGTGGGAGACTCTTCCTCCTCCCATCATCTGATTTCACATTTTG-ATA 1617
Query 1509 TCTTGC-CTTAGTCTGGTCTGTTTCTGCTACTTTTTGGTTTGCTTCTTTTGTTA-TGTTT 1566
||||| |||||||||||||||||||| | ||| | |||||||||||||||||| |||||
Sbjct 1618 TCTTGAGCTTAGTCTGGTCTGTTTCTGTTGCTTCT-GGTTTGCTTCTTTTGTTAATGTTT 1676
Query 1567 TAGGGTTGTTAGGAAA-ACTACAGGATGAGAGAAATAGCAATAGTCAAGAGAATATAAAC 1625
|||||||||||| ||| | || ||||||||||||||||||||||||||||||||||||||
Sbjct 1677 TAGGGTTGTTAGAAAATA-TATAGGATGAGAGAAATAGCAATAGTCAAGAGAATATAAAC 1735
Query 1626 ATAGAGAACATGATCATAGAGTTTTGTTAGAATTGATATTGATACGATTTTAAGTTTCCA 1685
|||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||
Sbjct 1736 ATAGAGAACATGATCATAGACTTTTGTTAGGATTGATATTAATACGATTTTAAGTTTCCA 1795
Query 1686 GGTTTCAGGTTGTGTTCTGTTTTGTCCTTACATGACTCTTTCTCAATGTAA-GAAATTAA 1744
| |||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||
Sbjct 1796 G-TTTCAGGTTGTGTTCTGTTTTGTCCTTATATGACTCTTTCTCAATGTAAAGAA-TTAA 1853
Query 1745 TCCTCTTTTGACCTTTAGCTTTTAAGCTGCTTTCATGGTGGTGTGAACTGTGACC 1799
|||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 1854 TCCTCTTTTGACCTTTAGCTTT-AAGCTCCTTTCATGGTGGTGTGAACTGTGACC 1907
Score = 147 bits (79), Expect = 5e-34
Identities = 97/105 (92%), Gaps = 3/105 (3%)
Strand=Plus/Plus
Query 28 AGAGTCCAGATCATCGTATTCACTTTGATTAAATCATTAATCAGATTTCCTTTTC-TTAT 86
|||||||||||||||||||||| ||||||| |||||| |||||||||| | |||| ||||
Sbjct 65 AGAGTCCAGATCATCGTATTCAATTTGATT-AATCATAAATCAGATTT-CATTTCGTTAT 122
Query 87 CCTTTCCCTGGATTCAGTTTCTTCGAATCCGATCGAATTTCGAAT 131
|||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 123 CCTTTCCCAGGATTCAATTTCTTCGAATCCGATCGAATTTCGAAT 167
> AT2G24240.1 | Symbols: | BTB/POZ domain with WD40/YVTN repeat-like
protein | chr2:10310648-10312328 FORWARD LENGTH=1681
Length=1681
Score = 1160 bits (628), Expect = 0.0
Identities = 1125/1360 (83%), Gaps = 53/1360 (4%)
Strand=Plus/Plus
Query 165 TAATGGGTTTATCAAATGACAGAATCAAATTCAACGTTGGTGGTA-GAATCTTCGAAACG 223
|||||||| | ||||| ||||| |||||||||||||||||||| | || |||||||||||
Sbjct 189 TAATGGGTATCTCAAAAGACAGGATCAAATTCAACGTTGGTGG-ACGACTCTTCGAAACG 247
Query 224 ACGGCGACGACCCTCGCTAACGCTGGTCGCGGTTCCTTCTTCGGAGCATTATTCGACGA- 282
||||||||||| | || ||||| ||||| | ||| |||||||||||||| ||||||||
Sbjct 248 ACGGCGACGACGTTAGCAAACGCAGGTCGTGATTCTTTCTTCGGAGCATTGTTCGACGAC 307
Query 283 AAATTGGAATCTTTCGCAACCCGACGA-T-C--TC--TTCATCGATC-GGAACCCAGATT 335
|| ||||||||||| | || || || | | || ||| | || | | ||| ||||||
Sbjct 308 GAA-TGGAATCTTTCACCACTTGAAGATTCCATTCTTTTCGTAGA-CAGAAACTCAGATT 365
Query 336 GCTTCGCCGTTCTTCTCGATCTCCTCCGAACAGGAGACCTCAAC-ATCCCACCTAATATC 394
||||||| |||||||| ||||| ||||| || |||||||| ||| ||| || || |||
Sbjct 366 GCTTCGCAGTTCTTCTTGATCTTCTCCGTACGGGAGACCTTAACGTTCCGGCC-AACATC 424
Query 395 CCGGAGCGTCTCCTTCACAAAGAAGCAAT-GTTCTACGGCTTAATCGACCACT-TACGAA 452
|| |||||||||||||| | |||||| | |||||||| ||| | ||||| | |||| |
Sbjct 425 CCTGAGCGTCTCCTTCATAGAGAAGC-TTCTTTCTACGGTTTACTTGACCA-TGTACGGA 482
Query 453 CCGC-AAAGTGGGGACC-TTTCGACGGTAACAGACTCCACCTCTCTC-G-CTCCGTCACC 508
|||| ||| ||||| || ||| || |||||| | || | ||| || | || || |
Sbjct 483 CCGCTAAA-TGGGGTCCGTTT-GATGGTAACCG--TCTTCGTCTATCGGATTCTGTTAAA 538
Query 509 GGCATAGCTCCCGGAGACGGAACGGCGATAAGAGCTGGTCCGGATGGCGGATGCTGTGTC 568
|| || ||||||||||||||||| || || || || ||||| |||||||| || || |||
Sbjct 539 GGAATTGCTCCCGGAGACGGAACCGCCATCAGGGCAGGTCCTGATGGCGGTTGTTGCGTC 598
Query 569 GCTCACGGGAGCGTTGTCCACGTGTTTGATTGGATGCTT-GAGGAGCATCCGACGATTAA 627
|| |||||||| ||||| || || |||||||||||| || || || ||| | |||| ||
Sbjct 599 GCGCACGGGAGTGTTGTTCATGTTTTTGATTGGATG-TTGGAAGAACATTCTCCGATCAA 657
Query 628 TCTTGATTACCAAAGAGTGAACGATGTGGGTTGGATTGATTCCGGTAACATTGTTCTCTC 687
||||||||||| ||||| |||||||| || ||||||||||| | ||||| || |||||
Sbjct 658 CCTTGATTACCAGAGAGTAAACGATGTTGGCTGGATTGATTCAGACAACATCGTACTCTC 717
Query 688 TGCTTGTGAGAGATTAGGAAGAGGAGATGGAGGAATGGGATTGTTTAGCTCATCTTCTGG 747
||||||||||| ||| |||||||||||||||||||||||| |||| || |||||||| ||
Sbjct 718 TGCTTGTGAGAAATTGGGAAGAGGAGATGGAGGAATGGGACTGTTCAGTTCATCTTCCGG 777
Query 748 TGAGCTTAGGTATAAGTTTCAGGTGAGTCATGATAATCAGATTAAGAGTTATAGTGCTGG 807
||| ||| |||||||||||||||| ||||||| |||||| | |||||||||| |||||
Sbjct 778 TGATCTTCGGTATAAGTTTCAGGTCTGTCATGAGAATCAGGTGAAGAGTTATACAGCTGG 837
Query 808 AGCTTTGAG-TTTTAGTCCTGATTCCAAGATCTTTACGAGCTGCAAAGGAAGAAGCAATG 866
||||||||| |||| | || |||| |||| ||| ||||||||||||| | || ||||
Sbjct 838 AGCTTTGAGTTTTTCG-CCGGATTATGAGATTTTTGCGAGCTGCAAAGGTCGGAGTAATG 896
Query 867 AGTATGGAATTGGAGTTTGGGATCAAATTAA-TGGAAAGC-AACTAGATTTCTTTTACGA 924
|||||||||| |||||||||||||| | ||| |||||||| ||| |||||||| |||||
Sbjct 897 AGTATGGAATCGGAGTTTGGGATCAGA-TAACTGGAAAGCAAAC-CGATTTCTTCTACGA 954
Query 925 GAGTCCTGGTTGGTC-TTTAGGAGATGCTGATAAGCTGCAATGGTTGAGTGGTAAGAATT 983
||||||||||||||| || || |||||||| ||||| |||||| ||| ||||||||| |
Sbjct 955 GAGTCCTGGTTGGTCACTT-GGTGATGCTGACAAGCTTCAATGGCTGAATGGTAAGAACT 1013
Query 984 GCCTTCTTGTAGCTACTTTGTTTCCAAGGAAA-GATAATTGTTATATTAGCTTGTTGGAT 1042
| |||||||| ||||| |||||||||| |||| || || ||||| ||||| |||||||||
Sbjct 1014 GTCTTCTTGTGGCTACATTGTTTCCAA-GAAAGGACAACTGTTACATTAGTTTGTTGGAT 1072
Query 1043 TTCCGGGACAAGAACATGGTCTGGTCTTGGTCTGATATCGGGT-TTCT-TGCAACGGCCG 1100
|| ||||||||||||||||| ||||| ||||| ||||| |||| | || || || |
Sbjct 1073 TTTCGGGACAAGAACATGGTTTGGTCATGGTCGGATATTGGGTCTCCTATG--GCGATAG 1130
Query 1101 AGGAGAAGAGAGTGAGAGATGCGATAGCCATGGAAGAGAGCAATTCGATTTGTGTGGTGA 1160
| |||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||
Sbjct 1131 ACGAGAAGAGAGTGAGAGATGCAATAGCTATGGAAGATAGCAATTCGATTTGTGTGGTGA 1190
Query 1161 ATGAGTTTGAGGATCTAGGGTTTATTGATCTGAGGATGGATGGAGGAGGGAGTAGTGTGA 1220
|||||||||||||| | ||||||||||||||||||||| |||||||| || ||| |
Sbjct 1191 ATGAGTTTGAGGATTTGGGGTTTATTGATCTGAGGATGTATGGAGGA---AGC-GTG--A 1244
Query 1221 GGTGGAGTTCTAGGAGCAGGTTGATGAAAAGCAAGATGCCTGATGAGCCTTGTTACCCTA 1280
|||||||||| || || | ||||||| || |||||||||||||||||||||||||| |
Sbjct 1245 GGTGGAGTTCGAGAAGTAAACTGATGAAGAGTAAGATGCCTGATGAGCCTTGTTACCCGA 1304
Query 1281 AACTTGCTTTGCACGAAGGCCAGCTCTTCTCGTCTATGAATGATTCCATCTCTGTGTTTT 1340
|||| |||||||| ||||||||||| ||||| || ||||||||||| ||||||||||| |
Sbjct 1305 AACTAGCTTTGCATGAAGGCCAGCTTTTCTCATCAATGAATGATTCTATCTCTGTGTTCT 1364
Query 1341 GTGGATCAGACTGGGTTTTGACTTCTAGGTTGAA-AAGAAGCTATGGTGGCTCCATCTGT 1399
||||| |||||||||| || ||||||||| | || |||||||||||||||||| ||||||
Sbjct 1365 GTGGACCAGACTGGGTCTTAACTTCTAGGCT-AAGAAGAAGCTATGGTGGCTCAATCTGT 1423
Query 1400 GATTTCTCCATTGGTGGGGATCGG-TTGTTTGCATTGCACAGTGAGGAGAATGTGTTTGA 1458
||||||||||||||||| || || || ||||||||||| || |||||||||||||||||
Sbjct 1424 GATTTCTCCATTGGTGGCGACCGCCTT-TTTGCATTGCATAGCGAGGAGAATGTGTTTGA 1482
Query 1459 TGTGTGGGAGACTCTGCCTCCTCCCATCATCTGATTTCAC 1498
||| |||||||||| |||| ||| ||||| | ||| |||
Sbjct 1483 TGTCTGGGAGACTCCGCCTTGTCCGATCATATAATT-CAC 1521
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 89005566285
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5