BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491674 Length=723 Score E Sequences producing significant alignments: (Bits) Value AT4G30800.1 | Symbols: | Nucleic acid-binding, OB-fold-like pr... 924 0.0 > AT4G30800.1 | Symbols: | Nucleic acid-binding, OB-fold-like protein | chr4:15001134-15002671 FORWARD LENGTH=841 Length=841 Score = 924 bits (500), Expect = 0.0 Identities = 566/597 (95%), Gaps = 7/597 (1%) Strand=Plus/Plus Query 27 CGTCAGGAGATTTCAAGGTTTAGGGTTTCTGCAATTCAACCATGGCGGAGCAGACGGAGA 86 |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 42 CGTCAGAAGATTTCAAGGTTTAGGGTTTCTGCAATTCAACCATGGCAGAGCAGACGGAGA 101 Query 87 AGGCGTTTCTTAAGCAACCAAAAGTTTTCTTAAGCTCGAAGAAATCTGGTAAGGAAAAGA 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 102 AGGCGTTTCTTAAGCAACCAAAAGTTTTCTTAAGCTCGAAGAAATCTGGTAAGGGAAAGA 161 Query 147 GGCCTGGTAAAGGAGGTAATCGTTTCTGGAAGAACATTGGCCTTGGTTTCAAAACTCCTA 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 162 GGCCTGGTAAAGGAGGTAATCGTTTCTGGAAGAACATTGGCCTTGGTTTCAAAACTCCAA 221 Query 207 GAGAGGCTATTGAAGGAGCATACATTGACAAGAAATGTCCCTTTACTGGTACGGTTTCAA 266 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 222 GAGAGGCTATTGAAGGAACATACATTGACCAGAAATGTCCCTTTACTGGTACGGTTTCAA 281 Query 267 TCAGAGGCCGCATCTTGTCAGGCACTTGTCACAGTGCAAAGATGCAGAGGACGATCATTG 326 |||| || ||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 282 TCAGGGGTCGCATCTTGTCTGGAACTTGTCACAGTGCAAAGATGCAGAGGACGATCATTG 341 Query 327 TTCGTAGGGACTATCTTCACTTTGTGAAGAAGTATCAAAGATATGAGAAAAGACACTCAA 386 ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct 342 TTCGTAGGGACTATCTTCATTTTGTGAAGAAGTATCGAAGATATGAGAAAAGACACTCAA 401 Query 387 ACATTCCTGCTCATGTTTCCCCGTGCTTCCGTGTCAAAGAAGGAGATCATGTTACCATTG 446 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 402 ACATTCCTGCTCATGTTTCCCCGTGCTTCCGTGTCAAAGAAGGAGATCGTGTTACCATTG 461 Query 447 GGCAATGCAGGCCACTGTCAAAGACGGTGAGGTTCAATGTCTTGAAGGTCATTCCGGCTG 506 |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct 462 GGCAATGCAGGCCATTGTCAAAGACGGTGAGGTTCAATGTCCTGAAGGTCATTCCGGCTG 521 Query 507 GAAGCTCTTCCATTGGGAAGAAAGCATTCACTGGAATGTAAATGAGATTCAGATCTGTTG 566 |||||||||| || ||||| |||||||||||||||||||||| ||||||||||| ||||| Sbjct 522 GAAGCTCTTCTATCGGGAAAAAAGCATTCACTGGAATGTAAAAGAGATTCAGATTTGTTG 581 Query 567 GAAAAAGGTGCTAGCTA-T-T-CTAAGGGCTTAGAATTTTTCTA-CTAGAGTTATTG 619 |||| ||||| | ||| | | ||||| | |||||||||||||| | |||||||||| Sbjct 582 -AAAA-GGTGCGAACTAGTATTCTAAGAGTTTAGAATTTTTCTAGC-AGAGTTATTG 635 Score = 93.5 bits (50), Expect = 3e-18 Identities = 59/63 (94%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 618 TGATCAAAGGAAACCGGATTTTCTCTGTTTCATTTAGTGATTCAAGTATCAAGATAAGTC 677 ||||||||||||||| || ||| ||||||||||||||||||||||||||||||||| ||| Sbjct 656 TGATCAAAGGAAACCAGA-TTT-TCTGTTTCATTTAGTGATTCAAGTATCAAGATATGTC 713 Query 678 TAT 680 ||| Sbjct 714 TAT 716 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 35063434606 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5