BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491681
Length=2703
Score E
Sequences producing significant alignments: (Bits) Value
AT4G30710.1 | Symbols: QWRF8 | Family of unknown function (DUF5... 3927 0.0
AT4G30740.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 429 7e-119
AT2G24070.1 | Symbols: QWRF4 | Family of unknown function (DUF5... 350 5e-95
> AT4G30710.1 | Symbols: QWRF8 | Family of unknown function (DUF566)
| chr4:14965200-14969763 REVERSE LENGTH=2925
Length=2925
Score = 3927 bits (2126), Expect = 0.0
Identities = 2348/2451 (96%), Gaps = 31/2451 (1%)
Strand=Plus/Plus
Query 280 CAATTCTCCAGCTTGGTTAATCAATTCCGATCACGTTTCATATACCCAATTTCGATCTCG 339
|||||||||||||||| ||||||| |||||||||||| | ||| ||||| ||||||||||
Sbjct 389 CAATTCTCCAGCTTGGCTAATCAACTCCGATCACGTTCCGTATTCCCAAATTCGATCTCG 448
Query 340 AA-GGGGAC--AGAGAAGTCTTTCGCG-AGGAGAATCACGAGACTTTGATTACTTTTGGC 395
|| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 449 AAGGGGGACATAGAGAAGTCTTTCGCGAAGGAGAATCACGAGACTTTGATTACTTTTGGC 508
Query 396 ACTCTTAGGGTTTTCTTGCAGAATAAAGGGACTTCATTTACAGCAACTGGAGCTCTTTTT 455
||||||| |||||||| | |||||||||||||||||||||||||||||||||| |||||
Sbjct 509 ACTCTTA-TGTTTTCTTACTGAATAAAGGGACTTCATTTACAGCAACTGGAGCTGTTTTT 567
Query 456 ATTGTTTAGCTTCAA-TGCAGAATTAGACGAGAGGCAT---GAACTGCTGAATTCAATCA 511
|||||||| || ||| ||| ||||| ||||||||||| |||||||||||||||||||
Sbjct 568 ATTGTTTACCTCCAAGCGCATAATTAAACGAGAGGCATGAAGAACTGCTGAATTCAATCA 627
Query 512 ATGCAAGTTTGTTTCTTTAGCTTGAATGGATGTAGCAACAGATACTACAAGGCAACGTCT 571
||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 628 ATGCAAGTTTGTTTCGTTAGCTTGAATGGATGTAGCAACAGATACTACAAGGCGGCGTCT 687
Query 572 TCTTCCATCCGAGAAGAACAATGCACTTGCTGCCACTCGCCGTCCTCGAACAACGGAGGT 631
|||||||||||| |||||||||||| ||| |||||| |||||||||||||||| ||||||
Sbjct 688 TCTTCCATCCGACAAGAACAATGCAGTTGTTGCCACCCGCCGTCCTCGAACAATGGAGGT 747
Query 632 CAGTTCAAGATACAGATCACCAACGCCAACCAAAACCGGGCGATGCCCTTCCCCAAGCGT 691
||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||
Sbjct 748 CAGTTCAAGATACAGATCACCCACGCCTACCAAAAACGGGCGATGCCCTTCCCCAAGCGT 807
Query 692 CACAAGGCCGACAGTGTCTTCAAGCTCTCAATCTGTGGCTGCAAAAAGAGCAGTTTCAGC 751
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 808 CACAAGGCCAACAGTGTCTTCAAGCTCTCAATCTGTGGCTGCAAAAAGAGCAGTTTCAGC 867
Query 752 AGAGAGGAAGCGTCCTTCAACACCACCATCTCCGACTAGTCCCTCCACGCCGATACGTGA 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 868 AGAGAGGAAGCGTCCTTCAACACCACCATCTCCGACTAGTCCCTCCACGCCGATACGTGA 927
Query 812 CTTGTCTATAGACTTACCAGCTTCATCTAGGAGGCTATCTACAGGTCGTTTACCTGAAAG 871
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 928 CTTGTCTATAGACTTACCAGCTTCATCTAGGAGGCTATCTACTGGTCGTTTGCCTGAAAG 987
Query 872 CTTATGGCCTTCCACTATGAGAAGCCTCAGTGTTTCGTTTCAGTCGGATTCAGTCTCAGT 931
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 988 CTTATGGCCTTCCACTATGAGAAGCCTCAGTGTTTCGTTTCAGTCTGATTCAGTCTCTGT 1047
Query 932 GCCTGTTAGTAAGAAGGAGAAACCGGTTAGTAGTTCTTCTGTTGATCGAACATTGAGACC 991
||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 1048 CCCTGTTAGTAAGAAGGAGAGACCGGTTAGTAGTTCTTCTGGTGATCGAACATTGAGACC 1107
Query 992 TTCTTCGAATATAGCTCAGAAGCATAAGGCTGAAACGACCTCTATATCAAGAAAACCTAC 1051
|||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||
Sbjct 1108 TTCTTCGAATATAGCTCAAAAGCATAAGGCTGAAACGACCTCTGTATCAAGGAAACCTAC 1167
Query 1052 GCCAGAGAGGAAGGGAAGTCCATTGAAAGGGAAGAATAATGTATCTGATCTTTCAGAGAA 1111
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1168 GCCAGAGAGGAAAAGAAGTCCATTGAAAGGGAAGAATAATGTGTCTGATCTTTCAGAGAA 1227
Query 1112 TTCGAAACCTGTAGATGGTCCTCACAGTCGGTTGATAGAACAGCATCGGTGGCCTAGTAG 1171
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 1228 TTCGAAACCTGTAGATGGTCCTCATAGTCGGTTAATAGAACAGCATCGGTGGCCTAGTAG 1287
Query 1172 AATTGGTGGAAAGATCACTTCGAATTCTTTAAACAGAAGCTTGGATCTTGGTGACAAGGC 1231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1288 AATTGGTGGAAAGATCACTTCGAATTCTTTAAACAGAAGCTTGGATCTTGGTGACAAGGC 1347
Query 1232 TTCAAGGGGTTTACCAACTTCAGGGCCTGGACTGGGGCCGTCTCTTAGGAGAATGTCACT 1291
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1348 TTCAAGGGGTATACCAACTTCAGGGCCTGGAATGGGGCCGTCTCTTAGGAGAATGTCACT 1407
Query 1292 ACCATTGTCCAGCAGTTCAAGACCTTTGCATAAAACTTCTAGTAACACATCTAGTTATGG 1351
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1408 TCCATTGTCCAGCAGTTCACGACCTTTGCATAAAACTTCTAGTAACACATCTAGTTATGG 1467
Query 1352 TGGATTAGTGTCTCCAACAAAGTCGGAAGATAATAACATAGCTCGAACTTCTGGGGCTCA 1411
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1468 TGGCTTAGTGTCTCCAACAAAGTCGGAAGATAATAACATAGCTCGAACTTCTGGGGCTCA 1527
Query 1412 AAGACTTTTGTCTGCAGGTTCGTTGGATAGAGCAACATTAGCAACGGCTGTAGCTAGGTT 1471
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1528 AAGACTATTGTCTGCAGGTTCGTTGGATAGAGCAACATTAGCAACGGCTGTAGCTAGGTT 1587
Query 1472 GCATCCATTGCCTGCTCCTGGATCTCGCCCTGCTTCACCAAGTAGAACATCGTTTTCGTC 1531
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1588 GCATCCATTGCCTGCTCCTGGATCTCGCCCTGCTTCACCAAGTAGAACATCGTTTTTGTC 1647
Query 1532 TTC---GTCTATTTCCCGAGGCATGAGTACTTCGAGAGGAGTGAGTCCATCAAGAGGACT 1588
||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1648 TTCATCGTCTATTTCCCGAGGTATGAGTACTTCGAGAGGAGTGAGTCCATCAAGAGGACT 1707
Query 1589 AAGCCCTTCTAGAGGATTGAGTCCTACAAGAGGTTTAAGTCCTTCAAGAGGGTTAAGTCC 1648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1708 AAGCCCTTCTAGAGGATTGAGTCCTACAAGAGGTTTAAGTCCTTCAAGAGGGTTAAGTCC 1767
Query 1649 TTCGCGCGGCACAAATACTTCCTGTTTTGCTAGACCATCAACTCCACCTTCAAGAGGGAT 1708
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1768 TTCGCGCGGCACAAATACATCCTGTTTTGCTAGACCATCAACTCCACCTTCAAGAGGGAT 1827
Query 1709 AAGTCCTTCACGGATAAGACAAACCAGCACTTCCACACAATCCAGTACCACAACTTCAGT 1768
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct 1828 AAGTCCTTCACGGATAAGACAAACCACCACTTCCACACAATCCAGTACCACAACTTCGGT 1887
Query 1769 TCTCAGCTTCATCACGGACGTCAAGAAAGGCAAAAAAGCAAGCTATATCGAAGATGTTCA 1828
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1888 TCTCAGCTTCATCACGGATGTCAAGAAAGGCAAAAAAGCAAGCTATATCGAAGATGTTCA 1947
Query 1829 TCAACTGCGCTTGCTCCACAATAGATATTTACAGTGGCGGTTTGCAATTGCACAAGCTGA 1888
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct 1948 TCAACTGCGCTTGCTCCACAATAGATATTTACAGTGGCGATTTGCAATTGCACGAGCTGA 2007
Query 1889 ATCTGTAATGTATATTCAAAGACTAACTTCCGAGGAAACACTGTTCAATGTGTGGCATGC 1948
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2008 ATCTGTAATGTATATTCAACGACTAACTTCCGAGGAAACACTGTTCAATGTGTGGCATGC 2067
Query 1949 GATATCAGAACTACAGGATCATGTGACCAGGCAAAGGATTGGCCTACAACAGCTAAAGCT 2008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2068 GATATCAGAACTACAGGATCATGTGACCAGGCAAAGGATTGGCCTACAACAGCTAAAGCT 2127
Query 2009 AGAGATCAAACTCAACTCACTATTAAACGATCAGATGGTGAGCCTTGAAGATTGGGCCAC 2068
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2128 AGAGATCAAGCTCAACTCATTATTAAACGATCAGATGGTGAGCCTTGAAGATTGGGCCAC 2187
Query 2069 ACTTGAAAGAGACCATGTTAGTTCTTTAGTTGGAGCCATATCAGATTTAGAAGCAAACAC 2128
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2188 ACTTGAAAGAGATCATGTTAGTTCTTTAGTTGGAGCCATATCAGATTTAGAAGCAAACAC 2247
Query 2129 TCTTCGCCTTCCAGCGACTGGAGGAACAAAGGCGGACACTGAATCTTTGAAAGCAGCTAT 2188
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2248 TCTTCGCCTTCCAGCTACTGGAGGAACAAAGGCGGACACAGAATCTTTGAAAGCAGCTAT 2307
Query 2189 GTCCTCGGCCCTCGATGTAATGCAGGCTATGGGATCGTCCATTTGGTCTTTACTCTCAAA 2248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2308 GTCCTCGGCCCTCGATGTAATGCAGGCTATGGGATCGTCCATTTGGTCTTTACTCTCAAA 2367
Query 2249 GGTGGAGGAGATGAACATAATGGTAACAGAACTCGCTGTTGTAGTTACAAAAGAGAGTTC 2308
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2368 GGTGGAGGAGATGAACATAATGGTAACAGAACTCGCTGTTGTAGTAACAAAAGAGAGTTC 2427
Query 2309 TATGCAAGGAAAATGCGAAGATCTTCTGGCCTCTACTGCGATCATGCAGATAGAAGAGTG 2368
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2428 TATGCAAGGAAAATGCGAAGATCTTCTGGCCTCAACTGCGATCATGCAGATAGAAGAGTG 2487
Query 2369 TAGCCTCAAGACTCATCTGATACAAACTAGGCGAGAAGAAGGAGAAGACGCAAAGGAGAC 2428
||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 2488 TAGTCTCAGGACTCATCTGATACAAACTAGGCGAGAAGAAGGAGAAGACGCA--G-AGAC 2544
Query 2429 TCC---TCCATTGTTGCCATTAAGCAAGTTCCCATGGCCATAAATAACAAA-GCTTACAG 2484
||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 2545 TCCACCTCCATTGTTGCCATTAAGCAAGTTTCCATGGCCATAAATAACAAAAGCTTACAG 2604
Query 2485 TTCCCACACGCTCAACACTGATCACCTGTAAATTGCTCTCTGATGCCTC-ACAtttctct 2543
||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||
Sbjct 2605 TTCCCACACGCTCAACACTGATCACCTGTAAATTGCTCTTTGATGCCCCCACATTTCTCT 2664
Query 2544 tgtcgagatccttttttgatctttgcttgttgaagttttcttcttcttttttt-GGTATA 2602
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2665 TGTCGAGATCCTTTTTTGATCTTTGCTTGTTGAAGTTTTCTTCTTCTTTTTTTTGGTATA 2724
Query 2603 AAA-CATTAGCTTAGGAAAAAAGGAAGTGAAAGATCACGAGTTCGAAAGTCTTAGGATAC 2661
||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2725 AAAACATTAGCTTAGGAAAAAAGGAAGTGGAAGATCACGAGTTCGAAAGTCTTAGGATAC 2784
Query 2662 aaaaaaaGAAATTTATTTT-T-CACA--T-----GTAAGCTCTGATGTGGG 2703
||||| |||||||||||| | |||| | |||||||||||||||||
Sbjct 2785 CAAAAAGGAAATTTATTTTGTTCACAAATCACATGTAAGCTCTGATGTGGG 2835
Score = 244 bits (132), Expect = 3e-63
Identities = 154/164 (94%), Gaps = 4/164 (2%)
Strand=Plus/Plus
Query 119 TTTATTATTCGGATTAGAGAGAAAAATAAAAAGACTCTTTTTAATATCAAAATTAGGTGG 178
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 189 TTTATTATTCGGATTAGAGAGAAAAATAAAAAGACCCTTTT-AATATCAAAATTAGGTGG 247
Query 179 CGCGAAAATAACGCCctctctctctctctcttt--ttctct-ctctctctTTGATCTCCT 235
|||||||||||||||||||||||||| |||||| || | | ||||||||||||||||||
Sbjct 248 CGCGAAAATAACGCCCTCTCTCTCTCACTCTTTCCTTTTTTTCTCTCTCTTTGATCTCCT 307
Query 236 CGAACCCATCCTCTTAAATCGCCCGATCAATTCTATCACCGGCG 279
|||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 308 CGAACCCATCATCTTAAATCGCCCGATCAATTCTATCTCCGGCG 351
> AT4G30740.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein
match is: Family of unknown function (DUF566) (TAIR:AT4G30710.1);
Has 43 Blast hits to 43 proteins in 9 species: Archae
- 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:14979246-14979521
REVERSE LENGTH=276
Length=276
Score = 429 bits (232), Expect = 7e-119
Identities = 260/274 (95%), Gaps = 0/274 (0%)
Strand=Plus/Plus
Query 888 ATGAGAAGCCTCAGTGTTTCGTTTCAGTCGGATTCAGTCTCAGTGCCTGTTAGTAAGAAG 947
||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 1 ATGAGAATCCTCAGTGTTTCGTTTCAGTCTGATTCAGTCTCAGTCCCTGTTAGTAAGAAG 60
Query 948 GAGAAACCGGTTAGTAGTTCTTCTGTTGATCGAACATTGAGACCTTCTTCGAATATAGCT 1007
|||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 61 GAGAGACTGGTTAGTAGTTCTTCTGGTGATCGAACATTGAGACCTTCTTCGAATATAGCT 120
Query 1008 CAGAAGCATAAGGCTGAAACGACCTCTATATCAAGAAAACCTACGCCAGAGAGGAAGGGA 1067
|| |||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||
Sbjct 121 CAAAAGCATAAGGCTGAAACGACCTCTGTATCAAGGAAACCTACGCCAGAGAGGAAAAGA 180
Query 1068 AGTCCATTGAAAGGGAAGAATAATGTATCTGATCTTTCAGAGAATTCGAAACCTGTAGAT 1127
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 181 AGTCCATTGAAAGGGAAGAATAATGTGTCTGATCTTTCAGAGAATTCGAAACCTGTAGAT 240
Query 1128 GGTCCTCACAGTCGGTTGATAGAACAGCATCGGT 1161
|||||||| |||||||| ||||||||||||||||
Sbjct 241 GGTCCTCATAGTCGGTTAATAGAACAGCATCGGT 274
> AT2G24070.1 | Symbols: QWRF4 | Family of unknown function (DUF566)
| chr2:10231822-10234296 REVERSE LENGTH=2140
Length=2140
Score = 350 bits (189), Expect = 5e-95
Identities = 494/633 (78%), Gaps = 54/633 (9%)
Strand=Plus/Plus
Query 575 TCCATCCGAGAAGAACAATGCA-CTTGCTGCCACTCGCCGTCCTCGAACAACGGAGGTCA 633
|||||| ||||||||||||| | || ||| ||| |||||| || |||||| |||||| |
Sbjct 394 TCCATCTGAGAAGAACAATGTAGGTT-CTGTCACGCGCCGTGCTAGAACAATGGAGGTTA 452
Query 634 GTTCAAGATACAGATCACCAACGCCAACCAAAACCGGGCGATGCCCTTCCCCAAGCGTCA 693
|||||||||| |||||||| || || || ||||| || |||| ||||| || | ||||
Sbjct 453 GTTCAAGATATAGATCACCGACTCCTACTAAAACTAGGAGATGTCCTTCACCTATTGTCA 512
Query 694 CAAGG-C--CGACAGTGTCTTCAAGC-TCTCAATCTGTGGC-TGCAAAAAGAGCAGTTTC 748
| ||| | || | | ||||| | | || |||| || | || |||||||| |||||
Sbjct 513 CCAGGACTGCG-C-CT-TCTTC-ATCACCTGAATC-GT-TCTTG--AAAAGAGCGGTTTC 564
Query 749 AGCAGAGAGGAA--G-CGTCCTTCAACACCACCATCTCCGACTAGTCCCTCCACGCCGAT 805
||| |||||||| | ||||||| |||||| | || || | || | | | |||
Sbjct 565 AGCGGAGAGGAACCGTGGTCCTTCGACACCA--A-CTACG-CCGGT---T--A-G-TGAT 613
Query 806 ACGTGACTTGTCTATAGACTTACCAGCTTCATCTAGGAGGCTATCTACAGGTCGTTTACC 865
|| | ||| |||| ||||| | ||| |||||||| |||||||| |||||||||||
Sbjct 614 --GT-A-TTG---GTAGATTTACCGGTTTCTTCTAGGAGACTATCTACTGGTCGTTTACC 666
Query 866 TGAAAGCTTATGGCCTTCCACTATGAGAAGCCTCAGTGTTTCGTTTCAGTCGGATTCAGT 925
|||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||
Sbjct 667 TGAAAGCTTATGGCCTTCTACTATGAGAAGCCTCAGTGTTTCTTTTCAGTCTGATTCAGT 726
Query 926 CTCAGTGCCTGTTAGTAAGAAGGAGAAACCGGTTAGT-AGTTCTTCTGT-TGATCGAACA 983
||||| |||||||||||||||||||||||| || || | |||||| | |||||| |||
Sbjct 727 GTCAGTTCCTGTTAGTAAGAAGGAGAAACCGCTT-GTTACTTCTTC-GACTGATCGGACA 784
Query 984 TTGAGACC-T-T-CTTCGAATATAGCTCAGAAGCATAAG-GCTGAAACGACCTCTATATC 1039
|||||||| | | ||||||||||||| || ||||| || | ||| || |||||| || |
Sbjct 785 TTGAGACCGTCTTCTTCGAATATAGCGCATAAGCAGCAGAG-TGAGACAACCTCTGTAAC 843
Query 1040 AAGAAAACCTACGCCAGAGAGGAAGGGAAGTCCATTGAAAGGGAA-GAATAATGTATC-T 1097
||| |||| ||||| |||||||| ||||||||||||| ||||| |||| ||| || |
Sbjct 844 AAGGAAACAAACGCCCGAGAGGAAAAGAAGTCCATTGAA-GGGAAAGAATG-TGTCTCCT 901
Query 1098 GATCTTTCAGAGAATTCGAAACCTGTAGATGGTCCTCACAGTCGGTTGATAG-A--ACAG 1154
| || ||||||||||| |||||| | |||||| |||| ||| ||| ||| | ||||
Sbjct 902 GGTCAATCAGAGAATTCAAAACCTATGGATGGTTCTCATAGTATGTTAATACCACCACAG 961
Query 1155 CATCGGTGGCCTAGTAGAATT-GGTGGAA-AGA 1185
||||| ||| || || ||||| || |||| |||
Sbjct 962 CATCGATGGTCTGGTCGAATTAGGGGGAACAGA 994
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 134246739468
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5