BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491721
Length=961
Score E
Sequences producing significant alignments: (Bits) Value
AT4G30290.1 | Symbols: ATXTH19, XTH19 | xyloglucan endotransglu... 1519 0.0
AT4G30280.1 | Symbols: ATXTH18, XTH18 | xyloglucan endotransglu... 1118 0.0
AT1G65310.1 | Symbols: ATXTH17, XTH17 | xyloglucan endotransglu... 1101 0.0
AT5G48070.1 | Symbols: ATXTH20, XTH20 | xyloglucan endotransglu... 904 0.0
AT5G57530.1 | Symbols: XTH12, AtXTH12 | xyloglucan endotransglu... 97.1 3e-19
> AT4G30290.1 | Symbols: ATXTH19, XTH19 | xyloglucan endotransglucosylase/hydrolase
19 | chr4:14828712-14830016 REVERSE LENGTH=1127
Length=1127
Score = 1519 bits (822), Expect = 0.0
Identities = 919/966 (95%), Gaps = 5/966 (1%)
Strand=Plus/Plus
Query 1 ATCAACAATATACATCT--G--ATCAAAACTCCTAGAGAGATCTAAT-AAAATGAAGTCT 55
||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||
Sbjct 1 ATCAACAATATACATCTGAGATATCAAAACTCCTAGAGAGATCTAATAAAAATGAAGTCT 60
Query 56 TTTGCGTTCTTGATTCTCTTTCTCTTTGCAGCACAATCTATGAGCGTCTATGCAGGCAGC 115
||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 61 TTTACGTTCTTGATTCTCTTTCTCTTTGCAGCACAATCTATCAGCGTCTATGCAGGCAGC 120
Query 116 TTTCACAAAGACGTTAAAATACATTGGGGTGATGGTCGAGGAAAGATTCACGATAATGAA 175
|| |||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||
Sbjct 121 TTCCACAAAGACGTTAAGATACATTGGGGTGATGGTCGTGGAAAGATTCACGATAATCAA 180
Query 176 GGGAAACTTCTTTCTCTCTCGCTTGACAAATCTTCTGGTTCAGGTTTCCAATCTAATCAA 235
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 181 GGGAAACTTCTATCTCTCTCGCTTGACAAATCCTCTGGTTCAGGTTTCCAATCTAATCAA 240
Query 236 GAGTTTCTCTATGGCAAAGCCGAGGTTCAAATGAAACTTGTCCCTGGTAACTCTGCTGGA 295
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 241 GAGTTTCTCTATGGTAAAGCCGAAGTTCAAATGAAACTTGTCCCTGGTAACTCTGCTGGA 300
Query 296 ACCGTCACAACATTCTATCTTAAATCTCCGGGAACTACATGGGATGAGATTGATTTCGAG 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 ACCGTCACAACATTCTATCTTAAATCTCCGGGAACTACATGGGATGAGATTGATTTCGAG 360
Query 356 TTCTTGGGGAACATAAGTGGTCATCCATATACTCTCCACACTAATGTTTACACAAAAGGC 415
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 361 TTTTTGGGGAACATAAGTGGTCATCCATATACTCTCCATACTAATGTTTACACAAAAGGC 420
Query 416 TCAGGAGACAAAGAACAACAGTTTCATCTATGGTTTGACCCAACCGCTAACTTCCACACT 475
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 421 TCAGGAGACAAAGAACAACAATTTCATCTATGGTTTGACCCAACCGCTAACTTTCACACT 480
Query 476 TACTGCATCACATGGAATCCTCAAAGGATTATTTTTACTGTTGATGGGATTCCAATTAGA 535
|| ||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct 481 TATTGCATCACATGGAATCCACAAAGAATTATTTTTACCGTTGATGGGATTCCAATTAGA 540
Query 536 GAGTTCATGAATGCCGAGTCACGTGGAGTCCCATTCCCAACGAAGCAACCAATGAGGCTC 595
||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 541 GAGTTTATGAATGCCGAGTCACGTGGAGTCCCATTCCCAACAAAGCAACCAATGAGGCTA 600
Query 596 TATGCGAGTCTCTGGGAAGCTGAGCATTGGGCTACAAGGGGAGGATTAGAGAAAACAGAT 655
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 601 TATGCGAGTCTATGGGAAGCAGAGCATTGGGCTACAAGGGGAGGATTAGAGAAAACAGAT 660
Query 656 TGGTCAAAAGCTCCTTTCACCGCTTTTTACAGAAACTACAATGTCGAAGGATGTGTTTGG 715
||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||
Sbjct 661 TGGTCAAAAGCTCCTTTCACCGCTTATTACAGAAACTACAATGTCGAGGGATGTGTATGG 720
Query 716 GCTAATGGAAAATCAGCTTGTCCAGCAAATTCTCAATGGTTCACTCAAAAACTCGATTCG 775
| ||||||||| |||| |||||| |||||||| |||||||||||||||||||||||||||
Sbjct 721 GTTAATGGAAAGTCAGTTTGTCCCGCAAATTCCCAATGGTTCACTCAAAAACTCGATTCG 780
Query 776 AATGGCCAGAAAAGAATGAAAGGGGTACAAAGTAAATACATGGTTTACAACTATTGCACC 835
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct 781 AATGGCCAGACAAGAATGAAAGGGGTACAGAGTAAATACATGGTTTACAACTATTGCTCC 840
Query 836 GATAAAAAGAGGTTTCCTCGAGGTGTTCCTCCAGAGTGCAGCTAAATTATTGATTCTTTG 895
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 841 GATAAAAAAAGGTTTCCTCGAGGTGTTCCTCCAGAGTGCAGCTAAATGATTGATTCTTTG 900
Query 896 ATTCGTGAATAAGTTACTTGGCATTGTCTTTGTAACTCAATGGTTCTTCTTTTCTATTAT 955
|||| | ||||||||||||| | |||||||||||||||||||||||||||| ||||| ||
Sbjct 901 ATTCATAAATAAGTTACTTGACGTTGTCTTTGTAACTCAATGGTTCTTCTTATCTATAAT 960
Query 956 TTTTCA 961
||||||
Sbjct 961 TTTTCA 966
> AT4G30280.1 | Symbols: ATXTH18, XTH18 | xyloglucan endotransglucosylase/hydrolase
18 | chr4:14825808-14827047 REVERSE LENGTH=1048
Length=1048
Score = 1118 bits (605), Expect = 0.0
Identities = 802/897 (89%), Gaps = 14/897 (2%)
Strand=Plus/Plus
Query 55 TTTTGCGTTCTTGATTCTCTTTCTCTTTGCAGCACAATCTATG-AGCGTCTATGCAGGCA 113
|||||||||||||||| | ||||||||||| |||||||||||| | |||||||| || |
Sbjct 73 TTTTGCGTTCTTGATTATGTTTCTCTTTGCGGCACAATCTATGCA-TGTCTATGCGGGTA 131
Query 114 GCTTTCACAAAGACGTTAAAATACATTGGGGTGATGGTCGAGGAAAGATTCACGATAATG 173
|||| |||||||| ||| | |||||||||||||| || || |||||| | | ||| | |
Sbjct 132 GCTTCCACAAAGATGTTCAGATACATTGGGGTGACGGCCGTGGAAAGGTGCGCGA-CA-G 189
Query 174 A-AGGGAAA-CTTCTTTCTCTCTCGCTTGACAAATCTTCTGGTTCAGGTTTCCAATCTAA 231
| | ||||| ||||| ||||||||||| |||||||| ||||| || ||||| || || ||
Sbjct 190 AGATGGAAAGCTTCTATCTCTCTCGCTCGACAAATCCTCTGGATCCGGTTTTCAGTCCAA 249
Query 232 TCAAGAGTTTCTCTATGGCAAAGCCGAGGTTCAAATGAAACTTGTCCCTGGTAACTCTGC 291
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 250 CCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAATGAAACTTGTCCCTGGTAACTCAGC 309
Query 292 TGGAACCGTCACAACATTCTATCTTAAATCTCCGGGAACTACATGGGATGAGATTGATTT 351
|||||| || ||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 310 TGGAACAGTAACAACATTCTATCTTAAGTCTCCGGGAACTACGTGGGATGAGATTGATTT 369
Query 352 CGAGTTCTTGGGGAACATAAGTGGTCATCCATATACTCTCCACACTAATGTTTACACAAA 411
||||||||| || ||| ||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 370 CGAGTTCTTAGGAAACCTAAGTGGTCATCCGTATACTCTCCATACTAATGTTTACACAAA 429
Query 412 AGGCTCAGGAGACAAAGAACAACAGTTTCATCTATGGTTTGACCCAACCGCTAACTTCCA 471
|||||||||||||||||||||||| |||||||||||||| |||||||| | |||||| ||
Sbjct 430 AGGCTCAGGAGACAAAGAACAACAATTTCATCTATGGTTCGACCCAACTGTTAACTTTCA 489
Query 472 CACTTACTGCATCACATGGAATCCTCAAAGGATTATTTTTACTGTTGATGGGATTCCAAT 531
|||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct 490 CACTTATTGCATCACATGGAATCCCCAAAGGATTATTTTTACAGTTGATGGAATTCCTAT 549
Query 532 TAGAGAGTTCATGAA-TGCCGAGTCACGTGGAGTCCCATTCCCAACGAAGCAACCAATGA 590
||||||||||| ||| | |||||||| |||||| || ||||||||||||||||||||||
Sbjct 550 TAGAGAGTTCAAGAACT-CCGAGTCAATTGGAGTTCCGTTCCCAACGAAGCAACCAATGA 608
Query 591 GGCTCTATGCGAGTCTCTGGGAAGCTGAGCATTGGGCTACAAGGGGAGGATTAGAGAAAA 650
|||| || ||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 609 GGCTTTACGCGAGTCTCTGGGAAGCCGAGCATTGGGCTACAAGGGGAGGGTTAGAGAAAA 668
Query 651 CAGATTGGTCAAAAGCTCCTTTCACCGCTTTTTACAGAAACTACAATGTCGAAGGATGTG 710
||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 669 CAGATTGGTCAAAGGCTCCTTTCACCGCTTTCTACAGAAACTACAATGTTGAAGGATGTG 728
Query 711 TTTGGGCTAATGGAAAATCAGCTTGTCCAGCAAATTC-TCAATGGTTCACTCAAAAACTC 769
| |||||||||||||||||| ||||||| |||||||| ||| |||||||||||| |||||
Sbjct 729 TATGGGCTAATGGAAAATCATCTTGTCCCGCAAATTCCTCA-TGGTTCACTCAACAACTC 787
Query 770 GATTCGAATGGCCAGAAAAGAATGAAAGGGGTACAAAGTAAATACATGGTTTACAACTAT 829
||||| || ||||||| |||||||||||||||||| ||||| |||||||| |||||||||
Sbjct 788 GATTCAAACGGCCAGACAAGAATGAAAGGGGTACAGAGTAAGTACATGGTCTACAACTAT 847
Query 830 TGCACCGATAAAAAGA-GGTTTCCTCGAGGTGTTCCTCCAGAGTGCAGCTAAATTATTGA 888
|| | ||| |||| || |||||||||||||||||||| ||||||||| |||||| ||||
Sbjct 848 TGTAACGACAAAA-GAAGGTTTCCTCGAGGTGTTCCTGTAGAGTGCAGTTAAATTGTTGA 906
Query 889 TTCTTTGATTCGTGAATAAGTTACTTGGCATTGTCTTTGTAACTCAAT-G-GTTCTT 943
||||||||| | ||||||||||||||||||||| ||| |||||||||| | ||||||
Sbjct 907 TTCTTTGATACATGAATAAGTTACTTGGCATTGCCTTAGTAACTCAATTGAGTTCTT 963
> AT1G65310.1 | Symbols: ATXTH17, XTH17 | xyloglucan endotransglucosylase/hydrolase
17 | chr1:24257216-24258473 FORWARD LENGTH=1049
Length=1049
Score = 1101 bits (596), Expect = 0.0
Identities = 796/891 (89%), Gaps = 20/891 (2%)
Strand=Plus/Plus
Query 56 TTTGCGTTCTTGA-TTCTCTTTC-TCTTTGCAGCACAATCTATG-AGCGTCTATGCAGGC 112
||||||||||| | |||| |||| || |||| ||||||||| || | |||||||| ||
Sbjct 71 TTTGCGTTCTT-ACTTCTGTTTCTTC-TTGCGGCACAATCTGTGCA-TGTCTATGCGGGT 127
Query 113 AGCTTTCACAAAGACGTTAAAATACATTGGGGTGATGGTCGAGGAAAGATTCACGATA-A 171
||||| |||||||||||| | ||||||||||||||||| || |||||||||||||| | |
Sbjct 128 AGCTTCCACAAAGACGTTCAGATACATTGGGGTGATGGCCGCGGAAAGATTCACGACAGA 187
Query 172 TGAAGGGAAACTTCTTTCTCTCTCGCTTGACAAATCTTCTGGTTCAGGTTTCCAATCTAA 231
|| || |||||||||||||||||||| |||||||| ||||| || ||||| || |||||
Sbjct 188 -GATGGAAAACTTCTTTCTCTCTCGCTCGACAAATCCTCTGGATCCGGTTTTCAGTCTAA 246
Query 232 TCAAGAGTTTCTCTATGGCAAAGCCGAGGTTCAAATGAAACTTGTCCCTGGTAACTCTGC 291
|| ||||||||||||||||||||||||||||||||||||||||| |||||||| || ||
Sbjct 247 CCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAATGAAACTTGTTCCTGGTAATTCAGC 306
Query 292 TGGAACCGTCACAACATTCTATCTTAAATCTCCGGGAACTACATGGGATGAGATTGATTT 351
|||||| || |||||||||||||| ||||||||||||||||| ||||||||||| |||||
Sbjct 307 TGGAACAGTGACAACATTCTATCTAAAATCTCCGGGAACTACGTGGGATGAGATCGATTT 366
Query 352 CGAGTTCTTGGGGAACATAAGTGGTCATCCATATACTCTCCACACTAATGTTTACACAAA 411
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 367 CGAGTTCTTGGGAAACATAAGTGGTCATCCATATACTCTCCATACTAATGTTTACACAAA 426
Query 412 AGGCTCAGGAGACAAAGAACAACAGTTTCATCTATGGTTTGACCCAACCGCTAACTTCCA 471
|||| ||||||||||||||||||| |||||||||||||| |||||||||| |||||| ||
Sbjct 427 AGGCACAGGAGACAAAGAACAACAATTTCATCTATGGTTCGACCCAACCGTTAACTTTCA 486
Query 472 CACTTACTGCATCACATGGAATCCTCAAAGGATTATTTTTACTGTTGATGGGATTCCAAT 531
|||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||
Sbjct 487 CACTTATTGCATCACATGGAATCCTCAAAGGATTATTTTTACGGTTGATGGAATTCCTAT 546
Query 532 TAGAGAGTTCATGAATGCCGAGTC-ACGTGGAGTCCCATTCCCAACGA-AGCAACCAATG 589
||||||||||| ||| ||||| | | ||||||||| |||||||| | | |||||||||
Sbjct 547 TAGAGAGTTCAAGAACCCCGAGGCGAT-TGGAGTCCCGTTCCCAACTAGA-CAACCAATG 604
Query 590 AGGCTCTATGCGAGTCTCTGGGAAGCTGAGCATTGGGCTACAAGGGGAGGATTAGAGAAA 649
|| ||||| |||||||| |||||||| ||||||||||| ||||| |||||||||||||||
Sbjct 605 AGACTCTACGCGAGTCTTTGGGAAGCCGAGCATTGGGCAACAAGAGGAGGATTAGAGAAA 664
Query 650 ACAGATTGGTCAAAAGCTCCTTTCACCGCTTTTTACAGAAACTACAATGTCGAAGGATGT 709
||||||||||||||||||||||| || |||||||| ||||||||||||||||| ||||||
Sbjct 665 ACAGATTGGTCAAAAGCTCCTTTTACTGCTTTTTATAGAAACTACAATGTCGATGGATGT 724
Query 710 GTTTGGGCTAATGGAAAATCAGCTTGT-CCAGCAAATTCTCAATGGTTCACTCAAAAACT 768
|| |||||||||||||||||| ||||| || || ||||| | ||||||||||||||||||
Sbjct 725 GTATGGGCTAATGGAAAATCATCTTGTTCC-GCGAATTCCCCATGGTTCACTCAAAAACT 783
Query 769 CGATTCGAATGGCCAGAAAAGAATGAAAGGGGTACAAAGTAAATACATGGTTTACAACTA 828
||||||||| ||||||| |||||||||||| || ||||||||||||||| | ||||||||
Sbjct 784 CGATTCGAACGGCCAGACAAGAATGAAAGGTGTGCAAAGTAAATACATGATCTACAACTA 843
Query 829 TTGCACCGATAAAAAGA-GGTTTCCTCGAGGTGTTCCT-CCAGAGTGCAGCT-AAATTAT 885
|||||||||||||| || ||||||||||||| |||||| || ||||||| || ||||| |
Sbjct 844 TTGCACCGATAAAA-GAAGGTTTCCTCGAGGAGTTCCTGCC-GAGTGCA-CTTAAATTCT 900
Query 886 TGATTCTTTGATTCGTGAATAAGTTACTTGGCATTGTCTTTGTAACTCAAT 936
|||||||||||| | |||||| |||||||||||||| ||||||||||||||
Sbjct 901 TGATTCTTTGATACATGAATATGTTACTTGGCATTGCCTTTGTAACTCAAT 951
> AT5G48070.1 | Symbols: ATXTH20, XTH20 | xyloglucan endotransglucosylase/hydrolase
20 | chr5:19482106-19483452 FORWARD LENGTH=1122
Length=1122
Score = 904 bits (489), Expect = 0.0
Identities = 757/884 (86%), Gaps = 28/884 (3%)
Strand=Plus/Plus
Query 62 TTCTTGATTCTCTTTCTCTTTGCAGCACAATCTATGAGC--GTCTATGCAGGCAGCTTTC 119
||||||||| |||||||||||||||||||| ||||||| ||||| || || |||||||
Sbjct 83 TTCTTGATTATCTTTCTCTTTGCAGCACAA--TATGAGCGTGTCTACGCTGGTAGCTTTC 140
Query 120 ACAAAGACGTTAAAATACATTGGGGTGATGGTCGAGGAAAGATTCACGATAATGAAGGGA 179
|||| |||||| | ||||||||||||||||| || ||||| |||| ||| |||| |||
Sbjct 141 ACAAGGACGTTCAGATACATTGGGGTGATGGCCGTGGAAAAATTCTCGACAATG-TCGGA 199
Query 180 AA-CTTCTTTCTCTCTCGCTTGACAAA-TCTTCTGGTTCAGGTTTCCAATCTAATCAAGA 237
|| ||||||||||||||||| |||||| || |||||||| ||||| || || |||||||
Sbjct 200 AATCTTCTTTCTCTCTCGCTCGACAAATTC-TCTGGTTCCGGTTTTCAGTCCCATCAAGA 258
Query 238 GTTTCTCTATGGCAAAGCCGAGGTTCAAATGAAACTTGTCCCTGGTAACTCTGCTGGAAC 297
|||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 259 GTTTCTTTATGGCAAAGTAGAGGTTCAAATGAAACTTGTACCTGGTAACTCTGCTGGAAC 318
Query 298 CGTCACAACATTCTATCTTAAATCTCCGGGAACTACATGGGATGAGATTGATTTCGAGTT 357
|| |||||||||||||| |||||||| ||||||||||||||||| || ||||| |||||
Sbjct 319 AGTGACAACATTCTATCTAAAATCTCCTGGAACTACATGGGATGAAATAGATTTTGAGTT 378
Query 358 CTTGGGGAACATAAGTGGTCATCCATATACTCTCCACACTAATGTTTACACAAAAGGCTC 417
|||||| |||||||||||||||||||||||||| || ||||||||||||||||||||| |
Sbjct 379 CTTGGGAAACATAAGTGGTCATCCATATACTCTTCATACTAATGTTTACACAAAAGGCAC 438
Query 418 AGGAGACAAAGAACAACAGTTTCATCTATGGTTTGACCCAACCGCTAACTTCCACACTTA 477
|||||||||||||||||||||||||||||||||||||||||| | | |||| ||||||||
Sbjct 439 AGGAGACAAAGAACAACAGTTTCATCTATGGTTTGACCCAACTGTTGACTTTCACACTTA 498
Query 478 CTGCATCACATGGAATCCTCAAAGGATTATTTTTACTGTTGATGGGATTCCAATTAGAGA 537
|| |||| ||||||||| |||||| | |||||||| | ||||| ||||| || |||||
Sbjct 499 TTGTATCATATGGAATCCCCAAAGGGTCATTTTTACAATAGATGGAATTCCGATAAGAGA 558
Query 538 GTTCATGAA-TGCCGA-GTCACGTGGAGT-CCCATTCCCAACGAAGCAACCAATGAGGCT 594
|||| ||| | |||| | | | |||||| ||| ||||||| | | ||||||||||||||
Sbjct 559 ATTCAAGAACT-CCGAAGCC-CTTGGAGTTCCC-TTCCCAAAGCATCAACCAATGAGGCT 615
Query 595 CTATGCGAGTCTCTGGGAAGCTGAGCATTGGGCTACAAGGGGAGGATTAGAGAAAACAGA 654
|||||| || || |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 616 CTATGCTAGCCTTTGGGAAGCCGAGCATTGGGCTACAAGAGGAGGATTAGAGAAAACAGA 675
Query 655 TTGGTCAAAAGCTCCTTTCACCGCTTTTTACAGAAACTACAATGTCGAAGGATGTGTTTG 714
||||| |||||||||||||||||||| ||||||||||||||||| || | |||||| ||
Sbjct 676 CTGGTCCAAAGCTCCTTTCACCGCTTTCTACAGAAACTACAATGTGGATGCATGTGTGTG 735
Query 715 GGCTAATGGAAAATCAGCTTG-TCCAGCAAATTC-TCAATGGTTCACTCAAAAACTCGAT 772
| | |||||||||||| | || || || ||||| ||| ||||| |||||| ||| |||
Sbjct 736 GTCCAATGGAAAATCATCATGCTCT-GCGAATTCCTCA-TGGTTTACTCAAGTACTTGAT 793
Query 773 T-CGAATGGCCAGAAAAGAATGAAAGGGGTACAAAGTAAA-TACATGGTTTACAACTATT 830
| | || ||| |||| ||| ||||| ||| ||| || ||| |||||||| ||||||||||
Sbjct 794 TTCAAA-GGCAAGAATAGAGTGAAATGGGCACAGAG-AAAGTACATGGTCTACAACTATT 851
Query 831 GCACCGATAA-AAAGAGGTTTCCTCGAGGTGTTCCTCCAGAGTGCAGCTAAATTATTGAT 889
|||| ||||| ||| || ||||||| ||||| ||||||||||||||| ||||| | ||||
Sbjct 852 GCACTGATAAGAAA-AGATTTCCTCAAGGTGCTCCTCCAGAGTGCAGTTAAATAACTGAT 910
Query 890 T-CTTTGATTCGTGAAT-AAGTTACTTGGCATTGTCTTTGTAAC 931
| ||| ||||| |||| || | || ||||||||||||||||||
Sbjct 911 TGCTT-GATTCACGAATTAA-TCACGTGGCATTGTCTTTGTAAC 952
> AT5G57530.1 | Symbols: XTH12, AtXTH12 | xyloglucan endotransglucosylase/hydrolase
12 | chr5:23300321-23301605 REVERSE LENGTH=1062
Length=1062
Score = 97.1 bits (52), Expect = 3e-19
Identities = 364/506 (72%), Gaps = 56/506 (11%)
Strand=Plus/Plus
Query 212 GGTTCAGGTTTCCAATCTAATCAAGAGT-TTCTCTAT-GGCAAAG-CCGAGGT-TCAA-A 266
||||||||||| ||||| || |||||| || | | | || |||| ||| | | || |
Sbjct 228 GGTTCAGGTTTTCAATCCAAGAAAGAGTATT-TGT-TCGG-AAAGATCGA--TATGAAGA 282
Query 267 TGAAACTTG-TCCCTGGTAACTCTGCTGGAACCGTCACAACATT-CTATCTTAAATC-TC 323
| ||||||| |||| || || ||||| |||||||||||| | || ||| ||| ||
Sbjct 283 TAAAACTTGTTCCC-GGAAATTCTGCCGGAACCGTCACAGC-TTACTACCTTTCTTCAAA 340
Query 324 CGG-GAACTACATGGGATGAGATTGATTTCGAGTTCTTGGGGAACATAAGTGGTCATCCA 382
|| | | |||||||||||||||||||||||||||||||| ||| | | ||| || ||
Sbjct 341 AGGTG-A-GACATGGGATGAGATTGATTTCGAGTTCTTGGGTAACGTTACTGGACAGCCT 398
Query 383 TATACTCTCCACACTAATGT-TT-ACACAAAAGGCTCA-GG-AGACAAAGAACAA-CAGT 437
||| | |||| || ||||| || || | | || | | || | || ||| | ||||
Sbjct 399 TATGTTATCCATACAAATGTCTTTAC-CGGA-GG-TAAAGGTA-ACCGCGAA-ATGCAGT 453
Query 438 T-TCATCTATGGTTTGA-CCCAACCGCTAACTTCCACACTTACTGCATCACAT-GGAATC 494
| | |||| |||||||| |||| | ||| | |||||||||||| | | | | |||| |
Sbjct 454 TCT-ATCTCTGGTTTGATCCCA-CTGCTGATTTCCACACTTACACCGTG-CTTTGGAACC 510
Query 495 CTCA-AAGGATTATTTTTACTG-TTGATGGGATTCCAATTAGAGAGTTCATGAATGCCGA 552
||| || || || ||| ||| ||||||| || ||||| | | ||||| ||| ||
Sbjct 511 CTCTCAAC-ATCATCTTT-CTGGTTGATGGTATCCCAATCCGGGTGTTCAAGAACAATGA 568
Query 553 GTC-A-CGTGGAGTCCCATT-CCC-AACGAAGC-AACCAATGAGGCTCTA-TGCGAGTCT 606
| | | || | || | || ||| || |||| ||||||||| | |||| | | |||||
Sbjct 569 GGCTAACG-GC-GTGGC-TTACCCGAA--AAGCCAACCAATGAAGATCTACT-CAAGTCT 622
Query 607 CTGGGAAGCTGA-GCATTGGGCTACA-AGGG-GAGGATTAGAGAAAACAGATTGGTCAAA 663
||||||||||| | ||||||| ||| | || | ||| || || || |||||| | ||
Sbjct 623 ATGGGAAGCTGATG-ATTGGGCCACACAAGGCG-GGAA-AGTCAAGACCGATTGGACCAA 679
Query 664 AGCTCCTTTCACCGCTTTTTACAGAA 689
||||| |||| ||||| |||||||
Sbjct 680 CGCTCCATTCAGCGCTTCCTACAGAA 705
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 47019161592
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5