BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491722
Length=1008
Score E
Sequences producing significant alignments: (Bits) Value
AT4G30280.1 | Symbols: ATXTH18, XTH18 | xyloglucan endotransglu... 1443 0.0
AT1G65310.1 | Symbols: ATXTH17, XTH17 | xyloglucan endotransglu... 1319 0.0
AT4G30290.1 | Symbols: ATXTH19, XTH19 | xyloglucan endotransglu... 1064 0.0
AT5G48070.1 | Symbols: ATXTH20, XTH20 | xyloglucan endotransglu... 913 0.0
AT5G57530.1 | Symbols: XTH12, AtXTH12 | xyloglucan endotransglu... 65.8 8e-10
> AT4G30280.1 | Symbols: ATXTH18, XTH18 | xyloglucan endotransglucosylase/hydrolase
18 | chr4:14825808-14827047 REVERSE LENGTH=1048
Length=1048
Score = 1443 bits (781), Expect = 0.0
Identities = 887/939 (94%), Gaps = 3/939 (0%)
Strand=Plus/Plus
Query 1 ATCGACAATACATTTGAGATATCAATACTCCTCCACAA-ATCTACCAAAATGAAGCTTTC 59
||| |||||||||||||||||||||||| |||||| || || ||| ||||||||||||||
Sbjct 1 ATCAACAATACATTTGAGATATCAATACACCTCCAAAATATATACAAAAATGAAGCTTTC 60
Query 60 TTGTGGTACAAGTTTTGCGTTCTTGATTTTGTTTCTTTTTGCGGCACAATCTGTGCATGT 119
|||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||
Sbjct 61 TTGTGGTACAAGTTTTGCGTTCTTGATTATGTTTCTCTTTGCGGCACAATCTATGCATGT 120
Query 120 CAATGCGGGTAGCTTCCACAAAGACGTTCAGATACATTGGGGTGATGGCCGCGGAAAGAT 179
| |||||||||||||||||||||| |||||||||||||||||||| ||||| |||||| |
Sbjct 121 CTATGCGGGTAGCTTCCACAAAGATGTTCAGATACATTGGGGTGACGGCCGTGGAAAGGT 180
Query 180 TCGCGACAGAGATGGAAAGCTTCTTTCTCTCTCGCTCGACAAATCCTCTGGATCCGGTTT 239
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 181 GCGCGACAGAGATGGAAAGCTTCTATCTCTCTCGCTCGACAAATCCTCTGGATCCGGTTT 240
Query 240 TCAGTCTAACCAGGAGTTTCTCTATGGCAAAGCTGAGGTTCAAATGAAACTTGTCTCTGG 299
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct 241 TCAGTCCAACCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAATGAAACTTGTCCCTGG 300
Query 300 TAACTCAGCTGGAACAGTGACAACATTTTATCTTAAATCTCCGGGAACTACGTGGGATGA 359
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct 301 TAACTCAGCTGGAACAGTAACAACATTCTATCTTAAGTCTCCGGGAACTACGTGGGATGA 360
Query 360 GATTGATTTCGAGTTCTTGGGAAATCTTAGTGGTCATCCATATACTCTCCATACTAATGT 419
|||||||||||||||||| ||||| || ||||||||||| ||||||||||||||||||||
Sbjct 361 GATTGATTTCGAGTTCTTAGGAAACCTAAGTGGTCATCCGTATACTCTCCATACTAATGT 420
Query 420 TTACACAAAAGGCTCTGGAGATAAAGAACAACAATTTCATCTATGGTTCGACCCAACCGT 479
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 421 TTACACAAAAGGCTCAGGAGACAAAGAACAACAATTTCATCTATGGTTCGACCCAACTGT 480
Query 480 TAACTTTCACACTTATTGCATCACATGGAATCCCCAAAGGATTATTTTTACAGTTGATGG 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 TAACTTTCACACTTATTGCATCACATGGAATCCCCAAAGGATTATTTTTACAGTTGATGG 540
Query 540 AATTCCCATTAGAGAGTTCAAGAATTCCGAGTCAATTGGAGTTCCGTTCCCAACGAAGCA 599
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 541 AATTCCTATTAGAGAGTTCAAGAACTCCGAGTCAATTGGAGTTCCGTTCCCAACGAAGCA 600
Query 600 ACCAATGAGGCTCTACGCGAGTCTATGGGAAGCCGAGCATTGGGCTACAAGGGGAGGATT 659
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 601 ACCAATGAGGCTTTACGCGAGTCTCTGGGAAGCCGAGCATTGGGCTACAAGGGGAGGGTT 660
Query 660 AGAGAAAACAGATTGGTCAAAGGCTCCTTTTACCGCTTTCTACAGAAACTACAATGTTGA 719
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 661 AGAGAAAACAGATTGGTCAAAGGCTCCTTTCACCGCTTTCTACAGAAACTACAATGTTGA 720
Query 720 TGGGTGTGTATGGGCTAATGGAAAATCATCTTGTCCCACGAATTC-TCCATGGTTCACTC 778
|| ||||||||||||||||||||||||||||||||| | ||||| || |||||||||||
Sbjct 721 AGGATGTGTATGGGCTAATGGAAAATCATCTTGTCCCGCAAATTCCTC-ATGGTTCACTC 779
Query 779 AACAACTCGATTCAAACGGCCAGACAAGAATGAAAGGAGTACAGAGTAAGTACATGGTCT 838
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 780 AACAACTCGATTCAAACGGCCAGACAAGAATGAAAGGGGTACAGAGTAAGTACATGGTCT 839
Query 839 ACAACTATTGCACCGATaaaaaaaGGTTTCCTCGAGGTGTTCCAGCAGAGTGCAGTTAAA 898
|||||||||| | ||| |||| ||||||||||||||||||||| | ||||||||||||||
Sbjct 840 ACAACTATTGTAACGACAAAAGAAGGTTTCCTCGAGGTGTTCCTGTAGAGTGCAGTTAAA 899
Query 899 TTGTTGATTCTTTGATTCGTGAATAAGTTACATAGCATT 937
|||||||||||||||| | |||||||||||| | |||||
Sbjct 900 TTGTTGATTCTTTGATACATGAATAAGTTACTTGGCATT 938
> AT1G65310.1 | Symbols: ATXTH17, XTH17 | xyloglucan endotransglucosylase/hydrolase
17 | chr1:24257216-24258473 FORWARD LENGTH=1049
Length=1049
Score = 1319 bits (714), Expect = 0.0
Identities = 865/937 (92%), Gaps = 13/937 (1%)
Strand=Plus/Plus
Query 5 ACAATACATTTGAGATATCAATACTCCTCCACAAATCTACCAAAATGAAGCTTTCTTGTG 64
|||||||||||||||||||||||||||| | | | ||||||||||||||||||||
Sbjct 8 ACAATACATTTGAGATATCAATACTCCT-GTGAGA---A-CAAAATGAAGCTTTCTTGTG 62
Query 65 GTACAAGTTTTGCGTTCTTGA-TTTTGTTTCTTTTTGCGGCACAATCTGTGCATGTCAAT 123
||||||| ||||||||||| | || |||||||| ||||||||||||||||||||||| ||
Sbjct 63 GTACAAGCTTTGCGTTCTT-ACTTCTGTTTCTTCTTGCGGCACAATCTGTGCATGTCTAT 121
Query 124 GCGGGTAGCTTCCACAAAGACGTTCAGATACATTGGGGTGATGGCCGCGGAAAGATTCGC 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 122 GCGGGTAGCTTCCACAAAGACGTTCAGATACATTGGGGTGATGGCCGCGGAAAGATTCAC 181
Query 184 GACAGAGATGGAAAGCTTCTTTCTCTCTCGCTCGACAAATCCTCTGGATCCGGTTTTCAG 243
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 182 GACAGAGATGGAAAACTTCTTTCTCTCTCGCTCGACAAATCCTCTGGATCCGGTTTTCAG 241
Query 244 TCTAACCAGGAGTTTCTCTATGGCAAAGCTGAGGTTCAAATGAAACTTGTCTC-TGGTAA 302
||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||
Sbjct 242 TCTAACCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAATGAAACTTGT-TCCTGGTAA 300
Query 303 CTCAGCTGGAACAGTGACAACATTTTATCTTAAATCTCCGGGAACTACGTGGGATGAGAT 362
||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 301 TTCAGCTGGAACAGTGACAACATTCTATCTAAAATCTCCGGGAACTACGTGGGATGAGAT 360
Query 363 TGATTTCGAGTTCTTGGGAAATCTTA-GTGGTCATCCATATACTCTCCATACTAATGTTT 421
|||||||||||||||||||| | || |||||||||||||||||||||||||||||||||
Sbjct 361 CGATTTCGAGTTCTTGGGAAA-CATAAGTGGTCATCCATATACTCTCCATACTAATGTTT 419
Query 422 ACACAAAAGGCTCTGGAGATAAAGAACAACAATTTCATCTATGGTTCGACCCAACCGTTA 481
||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 420 ACACAAAAGGCACAGGAGACAAAGAACAACAATTTCATCTATGGTTCGACCCAACCGTTA 479
Query 482 ACTTTCACACTTATTGCATCACATGGAATCCCCAAAGGATTATTTTTACAGTTGATGGAA 541
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 480 ACTTTCACACTTATTGCATCACATGGAATCCTCAAAGGATTATTTTTACGGTTGATGGAA 539
Query 542 TTCCCATTAGAGAGTTCAAGAATTCCGAGTCAATTGGAGTTCCGTTCCCAACGA-AGCAA 600
|||| ||||||||||||||||| ||||| | |||||||| ||||||||||| | | |||
Sbjct 540 TTCCTATTAGAGAGTTCAAGAACCCCGAGGCGATTGGAGTCCCGTTCCCAACTAGA-CAA 598
Query 601 CCAATGAGGCTCTACGCGAGTCTATGGGAAGCCGAGCATTGGGCTACAAGGGGAGGATTA 660
|||||||| |||||||||||||| |||||||||||||||||||| ||||| |||||||||
Sbjct 599 CCAATGAGACTCTACGCGAGTCTTTGGGAAGCCGAGCATTGGGCAACAAGAGGAGGATTA 658
Query 661 GAGAAAACAGATTGGTCAAAGGCTCCTTTTACCGCTTTCTACAGAAACTACAATGTTGAT 720
|||||||||||||||||||| ||||||||||| ||||| || |||||||||||||| |||
Sbjct 659 GAGAAAACAGATTGGTCAAAAGCTCCTTTTACTGCTTTTTATAGAAACTACAATGTCGAT 718
Query 721 GGGTGTGTATGGGCTAATGGAAAATCATCTTGTCCCACGAATTCTCCATGGTTCACTCAA 780
|| |||||||||||||||||||||||||||||| || ||||||| |||||||||||||||
Sbjct 719 GGATGTGTATGGGCTAATGGAAAATCATCTTGTTCCGCGAATTCCCCATGGTTCACTCAA 778
Query 781 CAACTCGATTCAAACGGCCAGACAAGAATGAAAGGAGTACAGAGTAAGTACATGGTCTAC 840
|||||||||| ||||||||||||||||||||||| || || ||||| |||||| |||||
Sbjct 779 AAACTCGATTCGAACGGCCAGACAAGAATGAAAGGTGTGCAAAGTAAATACATGATCTAC 838
Query 841 AACTATTGCACCGATaaaaaaaGGTTTCCTCGAGGTGTTCCAGCAGAGTGCAGTTAAATT 900
||||||||||||||||||| ||||||||||||||| ||||| || ||||||| |||||||
Sbjct 839 AACTATTGCACCGATAAAAGAAGGTTTCCTCGAGGAGTTCCTGCCGAGTGCACTTAAATT 898
Query 901 GTTGATTCTTTGATTCGTGAATAAGTTACATAGCATT 937
||||||||||||| | |||||| ||||| | |||||
Sbjct 899 CTTGATTCTTTGATACATGAATATGTTACTTGGCATT 935
> AT4G30290.1 | Symbols: ATXTH19, XTH19 | xyloglucan endotransglucosylase/hydrolase
19 | chr4:14828712-14830016 REVERSE LENGTH=1127
Length=1127
Score = 1064 bits (576), Expect = 0.0
Identities = 773/867 (89%), Gaps = 18/867 (2%)
Strand=Plus/Plus
Query 72 TTTTGCGTTCTTGATTTTGTTTCTTTTTGCGGCACAATCTGTGCA-TGTCAATGCGGGTA 130
|||| ||||||||||| | ||||| ||||| ||||||||| | || ||| |||| || |
Sbjct 60 TTTTACGTTCTTGATTCTCTTTCTCTTTGCAGCACAATCTAT-CAGCGTCTATGCAGGCA 118
Query 131 GCTTCCACAAAGACGTTCAGATACATTGGGGTGATGGCCGCGGAAAGATTCGCGA-CA-G 188
||||||||||||||||| ||||||||||||||||||| || |||||||||| ||| |
Sbjct 119 GCTTCCACAAAGACGTTAAGATACATTGGGGTGATGGTCGTGGAAAGATTCACGATAATC 178
Query 189 AGATGGAAAGCTTCTTTCTCTCTCGCTCGACAAATCCTCTGGATCCGGTTTTCAGTCTAA 248
| | ||||| ||||| ||||||||||| |||||||||||||| || ||||| || |||||
Sbjct 179 A-AGGGAAA-CTTCTATCTCTCTCGCTTGACAAATCCTCTGGTTCAGGTTTCCAATCTAA 236
Query 249 CCAGGAGTTTCTCTATGGCAAAGCTGAGGTTCAAATGAAACTTGTCTCTGGTAACTCAGC 308
|| |||||||||||||| ||||| || |||||||||||||||||| |||||||||| ||
Sbjct 237 TCAAGAGTTTCTCTATGGTAAAGCCGAAGTTCAAATGAAACTTGTCCCTGGTAACTCTGC 296
Query 309 TGGAACAGTGACAACATTTTATCTTAAATCTCCGGGAACTACGTGGGATGAGATTGATTT 368
|||||| || |||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 297 TGGAACCGTCACAACATTCTATCTTAAATCTCCGGGAACTACATGGGATGAGATTGATTT 356
Query 369 CGAGTTCTTGGGAAATC-TTAGTGGTCATCCATATACTCTCCATACTAATGTTTACACAA 427
|||||| ||||| || | | ||||||||||||||||||||||||||||||||||||||||
Sbjct 357 CGAGTTTTTGGGGAA-CATAAGTGGTCATCCATATACTCTCCATACTAATGTTTACACAA 415
Query 428 AAGGCTCTGGAGATAAAGAACAACAATTTCATCTATGGTTCGACCCAACCGTTAACTTTC 487
||||||| ||||| |||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct 416 AAGGCTCAGGAGACAAAGAACAACAATTTCATCTATGGTTTGACCCAACCGCTAACTTTC 475
Query 488 ACACTTATTGCATCACATGGAATCCCCAAAGGATTATTTTTACAGTTGATGGAATTCCCA 547
||||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||||| |
Sbjct 476 ACACTTATTGCATCACATGGAATCCACAAAGAATTATTTTTACCGTTGATGGGATTCCAA 535
Query 548 TTAGAGAGTTCAAGAATTCCGAGTCAATTGGAGTTCCGTTCCCAACGAAGCAACCAATGA 607
|||||||||| | |||| |||||||| |||||| || |||||||| |||||||||||||
Sbjct 536 TTAGAGAGTTTATGAATGCCGAGTCACGTGGAGTCCCATTCCCAACAAAGCAACCAATGA 595
Query 608 GGCTCTACGCGAGTCTATGGGAAGCCGAGCATTGGGCTACAAGGGGAGGATTAGAGAAAA 667
|||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 596 GGCTATATGCGAGTCTATGGGAAGCAGAGCATTGGGCTACAAGGGGAGGATTAGAGAAAA 655
Query 668 CAGATTGGTCAAAGGCTCCTTTTACCGCTT-TCTACAGAAACTACAATGTTGATGGG-TG 725
||||||||||||| |||||||| ||||||| | ||||||||||||||||| || ||| ||
Sbjct 656 CAGATTGGTCAAAAGCTCCTTTCACCGCTTAT-TACAGAAACTACAATGTCGA-GGGATG 713
Query 726 TGTATGGGCTAATGGAAAATCA-TCTTGTCCCACGAATTCTCCA-TGGTTCACTCAACAA 783
|||||||| ||||||||| ||| | ||||||| | ||||| ||| |||||||||||| ||
Sbjct 714 TGTATGGGTTAATGGAAAGTCAGT-TTGTCCCGCAAATTC-CCAATGGTTCACTCAAAAA 771
Query 784 CTCGATTCAAACGGCCAGACAAGAATGAAAGGAGTACAGAGTAAGTACATGGTCTACAAC 843
|||||||| || |||||||||||||||||||| ||||||||||| |||||||| ||||||
Sbjct 772 CTCGATTCGAATGGCCAGACAAGAATGAAAGGGGTACAGAGTAAATACATGGTTTACAAC 831
Query 844 TATTGCACCGATaaaaaaaGGTTTCCTCGAGGTGTTCCAGCAGAGTGCAGTTAAATTG-T 902
|||||| ||||||||||||||||||||||||||||||| |||||||||| ||||| | |
Sbjct 832 TATTGCTCCGATAAAAAAAGGTTTCCTCGAGGTGTTCCTCCAGAGTGCAGCTAAAT-GAT 890
Query 903 TGATTCTTTGATTCGTGAATAAGTTAC 929
|||||||||||||| | ||||||||||
Sbjct 891 TGATTCTTTGATTCATAAATAAGTTAC 917
> AT5G48070.1 | Symbols: ATXTH20, XTH20 | xyloglucan endotransglucosylase/hydrolase
20 | chr5:19482106-19483452 FORWARD LENGTH=1122
Length=1122
Score = 913 bits (494), Expect = 0.0
Identities = 749/870 (86%), Gaps = 26/870 (3%)
Strand=Plus/Plus
Query 60 TTGTGGTACAAGTTTTGCGTTCTTGATTTTGTTTCTTTTTGCGGCACAATCTGTGCATGT 119
||| |||| ||| || || ||||||||| | ||||| ||||| ||||||| || || |||
Sbjct 64 TTGCGGTAGAAGGTTCGCCTTCTTGATTATCTTTCTCTTTGCAGCACAATATGAGCGTGT 123
Query 120 CAATGCGGGTAGCTTCCACAAAGACGTTCAGATACATTGGGGTGATGGCCGCGGAAAGAT 179
| | || |||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct 124 CTACGCTGGTAGCTTTCACAAGGACGTTCAGATACATTGGGGTGATGGCCGTGGAAAAAT 183
Query 180 TCGCGACAGA-GAT-GGAAAGCTTCTTTCTCTCTCGCTCGACAAATCCTCTGGATCCGGT 237
|| ||||| | | | ||||| ||||||||||||||||||||||||| |||||| ||||||
Sbjct 184 TCTCGACA-ATG-TCGGAAATCTTCTTTCTCTCTCGCTCGACAAATTCTCTGGTTCCGGT 241
Query 238 TTTCAGTCTAACCAGGAGTTTCTCTATGGCAAAGCT-GAGGTTCAAATGAAACTTGT-CT 295
|||||||| | || |||||||| |||||||||| | |||||||||||||||||||| |
Sbjct 242 TTTCAGTCCCATCAAGAGTTTCTTTATGGCAAAG-TAGAGGTTCAAATGAAACTTGTAC- 299
Query 296 CTGGTAACTCAGCTGGAACAGTGACAACATTTTATCTTAAATCTCCGGGAACTACGTGGG 355
|||||||||| |||||||||||||||||||| ||||| |||||||| |||||||| ||||
Sbjct 300 CTGGTAACTCTGCTGGAACAGTGACAACATTCTATCTAAAATCTCCTGGAACTACATGGG 359
Query 356 ATGAGATTGATTTCGAGTTCTTGGGAAATCTTA-GTGGTCATCCATATACTCTCCATACT 414
|||| || ||||| |||||||||||||| | || ||||||||||||||||||| ||||||
Sbjct 360 ATGAAATAGATTTTGAGTTCTTGGGAAA-CATAAGTGGTCATCCATATACTCTTCATACT 418
Query 415 AATGTTTACACAAAAGGCTCTGGAGATAAAGAACAACAATTTCATCTATGGTTCGACCCA 474
|||||||||||||||||| | ||||| ||||||||||| |||||||||||||| ||||||
Sbjct 419 AATGTTTACACAAAAGGCACAGGAGACAAAGAACAACAGTTTCATCTATGGTTTGACCCA 478
Query 475 ACCGTTAACTTTCACACTTATTGCATCACATGGAATCCCCAAAGGATTATTTTTACAGTT 534
|| ||| |||||||||||||||| |||| |||||||||||||||| | ||||||||| |
Sbjct 479 ACTGTTGACTTTCACACTTATTGTATCATATGGAATCCCCAAAGGGTCATTTTTACAATA 538
Query 535 GATGGAATTCCCATTAGAGAGTTCAAGAATTCCGA-GTCAATTGGAGTTCCGTTCCCAAC 593
||||||||||| || ||||| |||||||| ||||| | | |||||||||| |||||||
Sbjct 539 GATGGAATTCCGATAAGAGAATTCAAGAACTCCGAAGCCC-TTGGAGTTCCCTTCCCAAA 597
Query 594 GAAGCAACCAATGAGGCTCTACGCGAGTCTATGGGAAGCCGAGCATTGGGCTACAAGGGG 653
| | ||||||||||||||||| || || || |||||||||||||||||||||||||| ||
Sbjct 598 GCATCAACCAATGAGGCTCTATGCTAGCCTTTGGGAAGCCGAGCATTGGGCTACAAGAGG 657
Query 654 AGGATTAGAGAAAACAGATTGGTC-AAAGGCTCCTTTTACCGCTTTCTACAGAAACTACA 712
|||||||||||||||||| ||||| |||| ||||||| ||||||||||||||||||||||
Sbjct 658 AGGATTAGAGAAAACAGACTGGTCCAAAG-CTCCTTTCACCGCTTTCTACAGAAACTACA 716
Query 713 ATGTTGATGGGTGTGTATGGGCTAATGGAAAATCATCTTG-TCCCACGAATTC-TCCATG 770
|||| |||| ||||| ||| | |||||||||||||| || || ||||||| || |||
Sbjct 717 ATGTGGATGCATGTGTGTGGTCCAATGGAAAATCATCATGCTCTG-CGAATTCCTC-ATG 774
Query 771 GTTCACTCAACAACTCGATT-CAAACGGCCAGACA-AGAATGAAA-GGAGTACAGAGTAA 827
||| |||||| ||| |||| |||| ||| ||| | ||| ||||| || | |||||| ||
Sbjct 775 GTTTACTCAAGTACTTGATTTCAAA-GGCAAGA-ATAGAGTGAAATGG-GCACAGAGAAA 831
Query 828 GTACATGGTCTACAACTATTGCACCGATaaaaaaaGGTTTCCTCGAGGTGTTCCAGCAGA 887
|||||||||||||||||||||||| ||||| ||||| ||||||| ||||| ||| ||||
Sbjct 832 GTACATGGTCTACAACTATTGCACTGATAAGAAAAGATTTCCTCAAGGTGCTCCTCCAGA 891
Query 888 GTGCAGTTAAATTGTTGATT-CTTTGATTC 916
|||||||||||| ||||| ||| |||||
Sbjct 892 GTGCAGTTAAATAACTGATTGCTT-GATTC 920
> AT5G57530.1 | Symbols: XTH12, AtXTH12 | xyloglucan endotransglucosylase/hydrolase
12 | chr5:23300321-23301605 REVERSE LENGTH=1062
Length=1062
Score = 65.8 bits (35), Expect = 8e-10
Identities = 58/69 (84%), Gaps = 2/69 (3%)
Strand=Plus/Plus
Query 352 TGGGATGAGATTGATTTCGAGTTCTTGGGAAATC-TTAGTGGTCATCCATATACTCTCCA 410
||||||||||||||||||||||||||||| || | ||| ||| || || ||| | ||||
Sbjct 351 TGGGATGAGATTGATTTCGAGTTCTTGGGTAA-CGTTACTGGACAGCCTTATGTTATCCA 409
Query 411 TACTAATGT 419
||| |||||
Sbjct 410 TACAAATGT 418
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 49380166501
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5