BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491739 Length=1234 Score E Sequences producing significant alignments: (Bits) Value AT4G30140.1 | Symbols: CDEF1 | GDSL-like Lipase/Acylhydrolase s... 1736 0.0 AT2G19060.1 | Symbols: | SGNH hydrolase-type esterase superfam... 233 3e-60 > AT4G30140.1 | Symbols: CDEF1 | GDSL-like Lipase/Acylhydrolase superfamily protein | chr4:14738387-14740676 REVERSE LENGTH=1391 Length=1391 Score = 1736 bits (940), Expect = 0.0 Identities = 1133/1223 (93%), Gaps = 25/1223 (2%) Strand=Plus/Plus Query 1 ACAATAAGCCAACTTTTCTTCTTCTCTCATTAAGC--TTT-TTCTCTCCTCATTTTTCGT 57 |||||||||| ||||||||||||||||||| |||| ||| ||||||||||||||||||| Sbjct 50 ACAATAAGCCCACTTTTCTTCTTCTCTCATCAAGCTTTTTCTTCTCTCCTCATTTTTCGT 109 Query 58 GT-A----A-TT-CG-AAAATGGTCGAGGGAGAGTCCAAGGCATTGTGGATTATTGTGGC 109 | | | || || ||||||||||||||||||||||||||||||||||||||| |||| Sbjct 110 ATAATTCGATTTGCGAAAAATGGTCGAGGGAGAGTCCAAGGCATTGTGGATTATTTTGGC 169 Query 110 CACCGTGTTTGCAGTCGCGGCGGTCGCACCAGCGGCACATGGACAACAAGCGCCGTGTTA 169 |||||||||||||||||||||||| |||||||||| |||||||| ||| |||||||||| Sbjct 170 CACCGTGTTTGCAGTCGCGGCGGTGGCACCAGCGGTGCATGGACAGCAAACGCCGTGTTA 229 Query 170 CTTCGTGTTTGGAGACTCTGTCTTCGACAATGGTAACAACAATGCCTTGAACACCAAGGC 229 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 230 CTTCGTGTTTGGAGACTCTGTCTTCGACAACGGTAACAACAATGCCTTGAACACCAAGGC 289 Query 230 TAAGGTCAACTATTTACCTTATGGTATAGATTTTC-CTCAAGGTCCGACCGGTCGGTTTA 288 ||||||||||||||||||||||||||||| || | ||||||||| ||||||||||||| Sbjct 290 CAAGGTCAACTATTTACCTTATGGTATAGA-TTACTTTCAAGGTCCAACCGGTCGGTTTA 348 Query 289 GCAACGGTCGGAATATTCCAGACGTTATCGCTGAACTAGCGGGTTTCAATGACTCAATTC 348 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 349 GCAACGGTCGGAATATTCCAGACGTTATCGCTGAACTAGCGGGTTTCAATAACCCAATTC 408 Query 349 CACCGTTCGCCGGAGCATCACAAGCACAAGCTAACATCGGACTCAACTATGCTTCCGGTG 408 |||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 409 CACCATTTGCCGGAGCATCACAGGCACAAGCTAACATCGGACTCAACTATGCTTCCGGTG 468 Query 409 CCGGAGGTATCCGCGAAGACACCAGCGAAAATATGGGTGAGAGAATCAGTTTGAGAAAGC 468 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct 469 CCGGCGGTATCCGCGAAGAAACCAGCGAAAATATGGGTGAGAGAATCAGTTTGAGACAGC 528 Query 469 AAATAAACAACCACCTGTCGGCGATCATAAACGCGGCGGTGCCACGGAGTCAGTTAAGGC 528 || ||||||||||| | || || ||||||| |||||||||||||| ||||| |||||||| Sbjct 529 AAGTAAACAACCACTTTTCCGCTATCATAACCGCGGCGGTGCCACTGAGTCGGTTAAGGC 588 Query 529 AATGTCTATACACAATCAACATCGGAAGCAACGATTACCTCAACAACTACTTCTTGTCGC 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 589 AATGTCTATACACAATCAACATCGGAAGCAACGATTACCTCAACAACTACTTCTTGTCGC 648 Query 589 CTCCTACTTTAGCACGTCGTATATATAATCCTGACCAGTACGCTCGATCTCTCATACGCC 648 |||||||| |||| |||||| ||| ||||||||||||||||||||||||||||||| ||| Sbjct 649 CTCCTACTCTAGCTCGTCGTCTATTTAATCCTGACCAGTACGCTCGATCTCTCATAAGCC 708 Query 649 TCTACCGTTTTTATTTGGA-GCAATTGTACGTACTAGGAGCGAGGAATGTAGCTTTGTTC 707 |||||||| | ||| || | ||||||||||||||||||||||||||||||||| |||||| Sbjct 709 TCTACCGTATCTATCTG-ACGCAATTGTACGTACTAGGAGCGAGGAATGTAGCGTTGTTC 767 Query 708 AGTATCGGTAAGATCGGATGTACACCACGAATTGTTGCTACCCTTGGTGGCGGCACTGGC 767 |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 768 GGTATCGGTAAGATCGGATGTACACCACGGATTGTTGCTACCCTCGGTGGCGGCACTGGC 827 Query 768 TGTGCAGAAGAAGTGAACCAAGCCGCGAATC-TCTTCAACATTAAACTCAAAGACCTAGT 826 || |||||||||||||||||||||| || || ||||||||| ||||||||||| |||||| Sbjct 828 TGCGCAGAAGAAGTGAACCAAGCCGTGA-TCATCTTCAACACTAAACTCAAAGCCCTAGT 886 Query 827 CACTACTTTT-AACAACAAATCTGGAGCTAAGTTCACTTATGTTGATCTCTTCTCTGGAA 885 ||| | ||| ||||||||| | ||||||| ||||||||||||||||||||||||||||| Sbjct 887 CAC-AGATTTCAACAACAAACCGGGAGCTATGTTCACTTATGTTGATCTCTTCTCTGGAA 945 Query 886 ATGCTGAAGATTTCGCAGCTCTAGGGATTACGGTTGGTGATAGGAGTTGCTGTACTGTTA 945 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 946 ATGCTGAAGATTTCGCCGCTCTAGGGATTACGGTTGGTGATAGGAGTTGCTGTACGGTTA 1005 Query 946 ATCCGGGGGAAGAACTTTGTGCTGCGAACGGACCGGTTTGTCCAGACCGAAACAAATACA 1005 ||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||| || Sbjct 1006 ATCCGGGTGAAGAACTTTGTGCGGCGAACGGACCGGTTTGTCCAGACAGAAACAAATTCA 1065 Query 1006 TATTCTGGGATAACGTGCATACTACGGAAGTGATCAATACTGTGGTGGCTAACGCAGCGT 1065 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1066 TATTCTGGGATAACGTGCATACTACGGAAGTGATAAATACTGTGGTGGCTAACGCAGCGT 1125 Query 1066 TTAACGGACCTATAGCT-GCTCCGTTCAACATATCCCAGCTT-GTGAATTAATATTAGGG 1123 ||||||||||||||||| | ||||||||||||||||||| || ||||||||| ||||||| Sbjct 1126 TTAACGGACCTATAGCTAG-TCCGTTCAACATATCCCAG-TTAGTGAATTAAAATTAGGG 1183 Query 1124 CTTTATATCCATTGTTAAAATGGCATAGTCC-TCTATGTAAATCCTGGTTTCGTCTAGAT 1182 || ||| |||||||||||||||||||||||| | ||| |||| | ||||||||||||||| Sbjct 1184 CTCTAT-TCCATTGTTAAAATGGCATAGTCCCTTTATTTAAAACTTGGTTTCGTCTAGAT 1242 Query 1183 GGAAACCATATATCAGACACATA 1205 |||||||||||||||||||||| Sbjct 1243 TGAAACCATATATCAGACACATA 1265 > AT2G19060.1 | Symbols: | SGNH hydrolase-type esterase superfamily protein | chr2:8257000-8260545 FORWARD LENGTH=1811 Length=1811 Score = 233 bits (126), Expect = 3e-60 Identities = 357/464 (77%), Gaps = 33/464 (7%) Strand=Plus/Plus Query 149 TGGACAACAAG-CGCCGTGTTACTTCGTGTTT-GGAGACTCTGTCTTCGACAATGGTAAC 206 |||||||| || | || || || ||||| ||| ||||||||||||||||||||||||||| Sbjct 103 TGGACAACTAGTC-CCTTGCTATTTCGT-TTTCGGAGACTCTGTCTTCGACAATGGTAAC 160 Query 207 AACAATGCCTTGAACACCAAGGCTAAGGTCAACTATTTACCTTATGGTATAGATTTTCCT 266 ||||||| ||| | ||| ||| || |||||||||| |||||| ||||| |||||| || Sbjct 161 AACAATGAGTTGGATACCCTGGCCAAAGTCAACTATTCACCTTACGGTATTGATTTTGCT 220 Query 267 CA-AGGTCCGACCGGTCGGTTTAGCAACGGTCGGAATATTCCAGACGTTATCGCTGAACT 325 | |||||| ||||| |||| ||||| ||||| |||||||| ||| ||||||||||| Sbjct 221 -AGAGGTCCTACCGGGAGGTTCAGCAATGGTCGTAATATTCCCGACTTTATCGCTGAAGA 279 Query 326 AGCGGGT-TTCAATGACTCA-ATTCCACCGTTCGCCGGAGCATC-ACAAGCACAAGCTAA 382 | | | || | | | | | |||||||| ||| || ||||||| || | ||||||| | Sbjct 280 ATTGAGAATT-AGTTA-TGACATTCCACCATTCACCAGAGCATCGACG-GAACAAGCTCA 336 Query 383 CATCGGACTCAACTATGCTTCCGGTG---CCGGAGGTATCCGCGAAGACACCAGCGAAAA 439 || |||| | || || ||||| |||| ||||| | || |||||| || ||| || | Sbjct 337 CACCGGAATAAATTACGCTTCTGGTGGTGCCGGAC-T-TCT-CGAAGAAACTAGCCAACA 393 Query 440 TATGGGTGAGAGAATCAGTTT-GAGAAAGCAAATAAAC-AACCACCTGTCGGCGATCATA 497 | | ||||| ||||||||||| || ||||||||||| | || |||| | | ||| || Sbjct 394 TTTAGGTGAAAGAATCAGTTTTGA-AAAGCAAATAA-CTAATCACCGGAAGATGATTATG 451 Query 498 AACG-CGGCG-GTGCCAC-GGAGTCAG-TTAAGGCAA-TGTCTATACACAATCAACATCG 552 | || ||| | || |||| |||| || ||||| || |||||||| ||||| || || | Sbjct 452 A-CGGCGG-GAGTTCCACCGGAGA-AGCTTAAG--AAGTGTCTATATACAATTAATATTG 506 Query 553 GAAGCAACGATTACCTCAACAACTACTTCTTGTCGCCTCC-TAC 595 ||||||| ||||| ||||||||||| ||| || || |||| ||| Sbjct 507 GAAGCAATGATTATCTCAACAACTATTTCATGCCGGCTCCCTAC 550 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 60642258360 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5