BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491792
Length=1435
Score E
Sequences producing significant alignments: (Bits) Value
AT4G29700.1 | Symbols: | Alkaline-phosphatase-like family prot... 2130 0.0
AT4G29690.1 | Symbols: | Alkaline-phosphatase-like family prot... 979 0.0
AT4G29710.1 | Symbols: | Alkaline-phosphatase-like family prot... 566 3e-160
> AT4G29700.1 | Symbols: | Alkaline-phosphatase-like family protein
| chr4:14543457-14545138 REVERSE LENGTH=1682
Length=1682
Score = 2130 bits (1153), Expect = 0.0
Identities = 1313/1390 (94%), Gaps = 11/1390 (1%)
Strand=Plus/Plus
Query 1 ATGGCTAAAACCAAAACTTTTCTTTCTTTCAAACTTTCTCTCA--TT-CTTCTTAATATT 57
|||||||||||||||| | || ||||||||||||||||||||| || ||||||||||||
Sbjct 15 ATGGCTAAAACCAAAAATGTTATTTCTTTCAAACTTTCTCTCATCTTCCTTCTTAATATT 74
Query 58 TTCATCATAGCCATCATAGCAGCCGCAGCCGCAGCTAACGCCCGTACCAATGGGTTAGAT 117
|||||| |||||| ||| ||||||||||| || | ||||||| ||||||| || || |||
Sbjct 75 TTCATCGTAGCCACCATCGCAGCCGCAGCGGCCGTTAACGCCGGTACCAAAGGTTTGGAT 134
Query 118 TCTCCGTCGTCCAAAA-CATGGCGTCCTTGGCCTTTCAAGAAGCTTAACAAACCGGTGGT 176
|||| | ||||||||| || ||||||| ||||||||||||||||| ||||||||||||||
Sbjct 135 TCTCGGCCGTCCAAAACCA-GGCGTCCCTGGCCTTTCAAGAAGCTCAACAAACCGGTGGT 193
Query 177 TTTAATGATTTCTTGTGACGGTTTCCGGTTTGGTTACCAATTTAAAACGGAAACACCAAA 236
||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 194 TTTAATGATCTCTTGCGACGGTTTCCGGTTTGGTTACCAATTTAAAACGGACACACCAAA 253
Query 237 CATCGACCTTCTCATATCCGGAGGAACCGAGGCCAAACACGGTTTAATCCCGGTTTTCCC 296
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 254 CATCGACCTTCTCATATCCGGAGGAACTGAGGCCAAACACGGTTTAATCCCGGTTTTCCC 313
Query 297 CACCATGACATTCCCAAACCACTACTCTATCGCAACCGGACTCTACCCGGCTTACCACGG 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 314 CACCATGACATTCCCAAACCACTACTCTATCGCAACCGGACTCTACCCGGCTTACCACGG 373
Query 357 TATAATCATGAACAAGTTTACCGATCCGGTTACGGGAGAGGTGTTCAACAAAGGCTTACA 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 374 TATAATCATGAACAAGTTTACCGATCCGGTTACGGGAGAGGTGTTCAACAAAGGCTTACA 433
Query 417 ACCGAAATGGTGGTTAGGTGAGCCGCTGTGGGTAACCGCAGCAAACCAAGGTCTCAAGGC 476
||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 434 ACCAAAATGGTGGTTAGGTGAGCCGCTGTGGGTAACCGCAGTAAACCAAGGTCTCAAGGC 493
Query 477 TGTGACTTACTTTTGGCCAGGCTCTGAAGTTCCCAAAGGTTCTTGGACTTGCCCTGAAGG 536
|||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct 494 TGTGACCTACTTTTGGCCAGGCTCTGAAGTTCTAAAAAGTTCTTGGACTTGCCCTGAAGG 553
Query 537 ATATTGTCCACGTTTCAATCTTTC-GATTCCTTTAGAAGAAAGGGTTGATTCGGTCTTGA 595
||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct 554 ATATTGTCCACATTTCAATCTTTCAG-TTCCTTTAGAAGAAAGGGTTGATTCGGTCTTGA 612
Query 596 GCCATTTTGATCACCCTGAGGACGAAATTCCTGATTTGCTGATGTTGTACTTCGATGAGT 655
||||||||||||||| |||||||||| |||||||||| ||||||||||| |||||||||
Sbjct 613 GCCATTTTGATCACCTTGAGGACGAAGTTCCTGATTTACTGATGTTGTATTTCGATGAGC 672
Query 656 CAGACCAATCGGGTCATAACTATGGTCCTGATGATGCTCGGGTTACGACTGCGGTTTCGA 715
||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |
Sbjct 673 CAGACCAATCGGGTCATAACTATGGTCCTGATGATCCTCGGGTTACGACTGCTGTTTCTA 732
Query 716 GGGTAGATAACATGATTGGTAGGGTGATAAACGGGCTTAAGAAGAGGTAGATCTTTGATG 775
|||| ||||| |||||||||||||||||||| ||||| ||| ||||| ||||||||||||
Sbjct 733 GGGTTGATAAAATGATTGGTAGGGTGATAAAGGGGCTGAAGCAGAGGGAGATCTTTGATG 792
Query 776 AGGTTCATGTGATATTGCTTGGTGATCACGGAATGGTGACCAACTGTGAATGTAACGAGA 835
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 793 AGGTTCATGTGATATTGCTTGGTGATCACGGAATGGTGACCAACTGTGAGTGTAACGAGA 852
Query 836 AAGCGATTTACATTGATGACTTAGCGGATTGGATCAAGATACCTGCGGCTTGGATCCAGG 895
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 853 AAGCGATTTACATTGATGACTTAGCGGATTGGATCAAGATACCCGCGGCTTGGATCCAGG 912
Query 896 CTTACAGCCCAGTTCTAGCAATTAATCCTCAGTGGGGCAAAAATGTCGAGAATCAA-GAC 954
||||||||||||| |||||||| |||||||||||||| ||| |||||||||||||| | |
Sbjct 913 CTTACAGCCCAGTGCTAGCAATCAATCCTCAGTGGGGGAAAGATGTCGAGAATCAAAG-C 971
Query 955 GAAAAGAACGCGGAAGTAGTGGCAAAGATGAACGAAGCTTTGAGCTCAGGGAAAGTAAAA 1014
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 972 GAAAAGAACGCGGAAGTCGTGGCGAAGATGAACGAAGCTTTGAGCTCAGGGAAAGTAAAA 1031
Query 1015 AACGGAGAGTTTTTGAAGGTTTACTTGAAGGAGAAGTTACCGGAAAGACTGCATTATTCC 1074
||||||||||||||||| |||||||||||||||||| |||| || |||||||||| |||
Sbjct 1032 AACGGAGAGTTTTTGAAAGTTTACTTGAAGGAGAAGCTACCAGAGAGACTGCATTTTTCA 1091
Query 1075 GAGAGTTCTCGGATTCCACCGATCATTGGAATGGTCGGAGAAGGTCTAATTGTCAGACAG 1134
||||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||||
Sbjct 1092 GAGAGTTATCGGATTCCACCGATCATAGGAATTGTCGGAGAAGGTCTAATGGTCAGACAG 1151
Query 1135 AACAGAACAAATGCTCAAGTTTGCTATGGAGACCATGGTTACGACAACGAGCTCTTCTCG 1194
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1152 AACAGAACAAATGCTCAAGTTTGCTATGGAGACCATGGTTATGACAACGAGCTCTTCTCG 1211
Query 1195 ATGAGGTCTATTTTTGTCGGACATGGTTCTAGGTTTAGTAGAGGGAAAAAAGTGCCATCC 1254
|||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1212 ATGAGGACTATTTTTGTCGGACATGGTTCTAGGTTTAGTAGAGGAAAAAAAGTGCCATCA 1271
Query 1255 TTCGAGAATGTGCAGATCTATAACGTCGTTGCAGAGCTTCTTGGACTCCGACCAGCTCCG 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1272 TTCGAGAATGTGCAGATCTATAACGTCGTTGCAGAGCTTCTTGGACTCCGACCAGCTCCG 1331
Query 1315 AACAATGGTTCTTCTTTGTTCCCTCGGAGCATTCTCTTGCCTTTTGGAGCAACAGGGGA- 1373
||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct 1332 AACAATGGTTCTTCTTTGTTCCCTCGGAGCATTCTCTTGCCTTCTGGAGCAACAAGGGAA 1391
Query 1374 GATAAAATGA 1383
| ||||||||
Sbjct 1392 G-TAAAATGA 1400
> AT4G29690.1 | Symbols: | Alkaline-phosphatase-like family protein
| chr4:14540907-14542481 REVERSE LENGTH=1575
Length=1575
Score = 979 bits (530), Expect = 0.0
Identities = 1018/1246 (82%), Gaps = 63/1246 (5%)
Strand=Plus/Plus
Query 153 CAAGAAGCTTAACAAACCGGTGGTTTTAATGATTTCTTGTGACGGTTTCCGGTTTGGTTA 212
||||||||| ||||||||||||||| | | ||||| || || ||||||||||| |||||
Sbjct 171 CAAGAAGCTCAACAAACCGGTGGTTCTGTTAATTTCCTGCGATGGTTTCCGGTTCGGTTA 230
Query 213 CCAATTTAAAACGGAAACACCAAACATCGACCTTCTCATATCCGGAGGAACCGAGGCCAA 272
|||||| || || || |||||||||||||| || ||||||||| |||| ||||| || ||
Sbjct 231 CCAATTCAAGACAGAGACACCAAACATCGATCTGCTCATATCCAGAGGTACCGAAGCTAA 290
Query 273 -ACACGGTTTAATCCCGGTTTTCCCCACCATGACATTCCCAAACCACTACTCTATCGCAA 331
|| ||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||| |
Sbjct 291 GAC-CGGTTTAATTCCGGTTTTCCCCACCATGACGTTCCCAAACCATTACTCAATCGCTA 349
Query 332 CCGGACTCTACCCGGCTTACCACGGTATAATCATGAACAAGTTTACCGATCCGGTTACG- 390
|||||||||| ||||||| |||||| |||||||||||||| ||||||||||||| || |
Sbjct 350 CCGGACTCTATCCGGCTTCCCACGGCATAATCATGAACAAATTTACCGATCCGG-TAAGT 408
Query 391 GGAGAGGTGTTCAACAAAGG--CTTACAA-CCGAAATGGTGGTTAGGTGAGCCGCTGTGG 447
|| || | |||||| ||| | || || || ||||||||||||||||||||| |||||
Sbjct 409 GGGGAACTATTCAAC--AGGAACCTA-AACCCTAAATGGTGGTTAGGTGAGCCGTTGTGG 465
Query 448 GTAACCGCAGCAAACCAAGGTCTCAAGGCTGTGACTTACTTTTGGCCAGGCTCTGAAGTT 507
|| ||||||| |||||||| |||| ||||| ||||||||||||||||||| |||| | |
Sbjct 466 GTGACCGCAGTGAACCAAGGGCTCATGGCTGCGACTTACTTTTGGCCAGGCGCTGACG-T 524
Query 508 CC-CAAAGGTTCTTGG-ACTTGCCCTGAAGGATATTGTCCACG-T--TT-CAATCTTTCG 561
|| |||||| |||||| || ||||| |||| | |||| | | | || |||| ||||
Sbjct 525 CCACAAAGGGTCTTGGAAC-TGCCCAAAAGGCTTTTGT-AAAGCTCCTTACAATGTTTC- 581
Query 562 A-TTCCTTTAGAAGAAAGGGTTGATTCGGTCTTGAGCCATTTTGATCACCCTGAG-GACG 619
| |||||||||||||||| || ||| || |||||| | |||| |||| || ||| || |
Sbjct 582 AGTTCCTTTAGAAGAAAGAGTCGATACGATCTTGAACTATTTCGATCTTCCAGAGAGA-G 640
Query 620 AAATTCCTGATTTGCTGAT-G-T-TGTACTTCGATGAGTCAGACCAAT-C-GGGTCATAA 674
|||| |||||||| | || | | |||| |||||||| | || | || | || ||| |
Sbjct 641 AAATCCCTGATTT-C--ATGGCTCTGTATTTCGATGAACCGGA-C-ATACAAGGCCATGA 695
Query 675 CTATGGTCCTGATGATGCTCGGGTTAC-GACTGCGGTTTCGAGGGTAGATAACATGATTG 733
|| || ||||||||| |||| || || || || || || | ||| ||||| ||||| |
Sbjct 696 GTACGGCCCTGATGATCCTCGCGTCACGGA-AGCCGTCTCAAAGGTCGATAAAATGATCG 754
Query 734 GTAGGGTGATAAACGGGCTT-AAGAAGAGGTAGATCTTTGA-TGAGGTTCATGTGATATT 791
||||| | || | ||| || |||||||| || | ||| | ||| ||||||||||||||
Sbjct 755 GTAGGATCAT-CATGGGATTGGAGAAGAGGAAGGT-TTTTAGTGATGTTCATGTGATATT 812
Query 792 GCTTGGTGATCACGGAATGGTGACCAACTGTGAATGTAACGAGAAAGCGATTTACATTGA 851
||||||||||||||||||||| || |||||||| || || || | ||||||||||||
Sbjct 813 GCTTGGTGATCACGGAATGGTTACTAACTGTGAC---AA-GA-AA-GTGATTTACATTGA 866
Query 852 TGACTTAGCGGATTGGATCAAGATACCTGCGGCTTGGATCCAGGCTTACAGCCCAGTTCT 911
||| ||||| ||||||||||||||||| |||| ||||||||| | ||| || || || ||
Sbjct 867 TGATTTAGCCGATTGGATCAAGATACCCGCGGATTGGATCCAAGATTATAGTCCGGTGCT 926
Query 912 AGCAATTAATCCTCAG-TGGGGCAAAAATGTCGAGAATCAAG-ACGAAAAGAACGCGGAA 969
||| || ||||| | | ||||||||| ||||| |||||| || || | ||||| || |||
Sbjct 927 AGCGATGAATCCGC-GCTGGGGCAAAGATGTCAAGAATCCAGGAC-AGAAGAATGCAGAA 984
Query 970 GTAGT--GGCAAAGATGAACGAAGCTTTGAGCTCAGGGAAAGTAAAAAACGGAGAGTTTT 1027
| || || || ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 985 CTCGTAAGG-AA-GATGAACGAAGCTTTGAGCTCAGGGAAAGTAGCCAACGGAGAGTTTT 1042
Query 1028 TGAAGGTTTACTTGAAGGAGAAGTTACCGGAAAGACTGCATTATTCCGAGAGTTCTCGGA 1087
|| ||||||||||||||||||| |||||| |||| |||||||||||||| ||||||||||
Sbjct 1043 TGCAGGTTTACTTGAAGGAGAATTTACCGCAAAGGCTGCATTATTCCGATAGTTCTCGGA 1102
Query 1088 TTCCACCGATCATTGGAATGGTCGGAGAAGGTCTAATTGTCAGACAGAACAGAACAAATG 1147
||||||||||||| |||||||| |||||||||||||| || | ||||||||||||| | |
Sbjct 1103 TTCCACCGATCATCGGAATGGTGGGAGAAGGTCTAATGGTTAAACAGAACAGAACATACG 1162
Query 1148 CTCAAGTTTGCTATGGAGAC-CATGGTTACGACAACGA-GCTCTTCTCGATGAGGTCTAT 1205
||||| || | |||| || ||||| ||||| || | | |||| || ||||| || ||
Sbjct 1163 TTCAAGAATGTTCTGGA-ACTCATGGATACGATAAT-ATGTTCTTTTCTATGAGATCAAT 1220
Query 1206 TTTTGTCGGACATGGTTCTAGGTTTAGTAGAGGGAA-AAAAGTGCCATCCTTCGAGAATG 1264
||||| ||| ||||| | |||||||| ||||| || |||||||||||| ||||||||||
Sbjct 1221 CTTTGTTGGATATGGTCCAAGGTTTAGGAGAGG-AATAAAAGTGCCATCGTTCGAGAATG 1279
Query 1265 TGCAGATCTATAACG-TCGTTGCAGAGCTTCTTGGACTCCGACCAGCTCCGAACAATGGT 1323
| ||| ||||||| | | ||||||||| |||| ||||||||||||||||||||||| |||
Sbjct 1280 TTCAGGTCTATAATGCT-GTTGCAGAGATTCTCGGACTCCGACCAGCTCCGAACAACGGT 1338
Query 1324 TCTTCTTTGTTCCCTCGGAG-CATTCTCTTGCCTTTTGGAGCAACA 1368
||||||||||| |||| || | |||||||||| ||||||| ||||
Sbjct 1339 TCTTCTTTGTTTACTCGTAGTC-TTCTCTTGCCATTTGGAGAAACA 1383
> AT4G29710.1 | Symbols: | Alkaline-phosphatase-like family protein
| chr4:14547001-14547402 REVERSE LENGTH=402
Length=402
Score = 566 bits (306), Expect = 3e-160
Identities = 372/404 (92%), Gaps = 4/404 (1%)
Strand=Plus/Plus
Query 982 ATGAACGAAGCTTTGAGCTCAGGGAAAGTAAAAAACGGAGAGTTTTTGAAGGTTTACTTG 1041
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1 ATGAACGAAGCTTTGAGCTCAGGGAAAGTAAAAAACGGAGAGTTTTTGACTGTTTACTTG 60
Query 1042 AAGGAGAAGTTACCGGAAAGACTGCATTATTCCGAGAGTTCTCGGATTCCACCGATCATT 1101
||||||||||||||||| ||||||||||||||| |||||| |||||||||||| |||||
Sbjct 61 AAGGAGAAGTTACCGGACAGACTGCATTATTCCCAGAGTTATCGGATTCCACCAATCATA 120
Query 1102 GGAATGGTCGGAGAAGGTCTAATTGTCAGACAGAACAGAACAAATGCTCAAGTTTGCTAT 1161
|||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||
Sbjct 121 GGAATGGTCGGAGAAGGTCTAATTGTCAGACAAAATAGAACTAATGCTCAAGAATGCTAC 180
Query 1162 GGAGACCATGGTTACGACAACGAGCTCTTCTCGATGAGGTCTATTTTTGTCGGACATGGT 1221
|||||||||||||| |||||| || ||||||| |||||| ||||||||||||||||||||
Sbjct 181 GGAGACCATGGTTATGACAACAAGTTCTTCTCAATGAGGACTATTTTTGTCGGACATGGT 240
Query 1222 TCTAGGTTTAGTAGAGGGAAA-AAAGTGCCATCCTTCGAGAATGTGCAGATCTATAACGT 1280
||||||||||| ||| ||||| ||||||||||| || ||||||||||||||||||| |||
Sbjct 241 TCTAGGTTTAGGAGA-GGAAAGAAAGTGCCATCGTTTGAGAATGTGCAGATCTATAGCGT 299
Query 1281 CGTTGCAGAGCTTCTTGGACTCCGACCAGCTCCGAACAATGGTTCTTCTTTGTTCCCTCG 1340
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 CGTTGCAGATATTCTTGGACTCCGACCAGCTCCGAACAATGGTTCTTCTTTGTTCCCTCG 359
Query 1341 GAGCATTCTCTTGCCTTTTGGAGCAACA-GGGGAGATAAAATGA 1383
|||||||||||||||||| |||||||| |||| | || |||||
Sbjct 360 GAGCATTCTCTTGCCTTTCAGAGCAACAAGGGG-GTTAGAATGA 402
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70732567905
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5