BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491793
Length=1547
Score E
Sequences producing significant alignments: (Bits) Value
AT4G29690.1 | Symbols: | Alkaline-phosphatase-like family prot... 2198 0.0
AT4G29700.1 | Symbols: | Alkaline-phosphatase-like family prot... 953 0.0
AT4G29710.1 | Symbols: | Alkaline-phosphatase-like family prot... 339 7e-92
> AT4G29690.1 | Symbols: | Alkaline-phosphatase-like family protein
| chr4:14540907-14542481 REVERSE LENGTH=1575
Length=1575
Score = 2198 bits (1190), Expect = 0.0
Identities = 1446/1567 (92%), Gaps = 28/1567 (2%)
Strand=Plus/Plus
Query 1 TCTCTCTCGATGACTAAAAGTAAACCTGGCCGGTCCTGTTTTTCCGGTTACACCA-TGTA 59
|||||||| ||||| ||||||||||||||||||||| ||||||||||||||| | ||||
Sbjct 16 TCTCTCTCAATGACGAAAAGTAAACCTGGCCGGTCCGGTTTTTCCGGTTACA-TATTGTA 74
Query 60 CAAGTTATCTCTAACCGTTCTCATCGTCCTCGT-CGTAGCCGTCACTGCCGATGGTTCGG 118
|||||||||||||||||||||||| |||||| | |||||||||||||||| |||||||||
Sbjct 75 CAAGTTATCTCTAACCGTTCTCATTGTCCTC-TCCGTAGCCGTCACTGCCAATGGTTCGG 133
Query 119 ACTCTCAAT-TGTCCAACGCT-AGGAGACCCCAGCCCTCCAAGAAACTCAACAAACCGGT 176
|||| | || | ||| ||| | ||||||||||| ||| ||||||| ||||||||||||||
Sbjct 134 ACTCCCCATCT-TCCTACG-TCAGGAGACCCCAACCCCCCAAGAAGCTCAACAAACCGGT 191
Query 177 GGTTCTATTGATTTCCTGCGACGGTTTCCGGTTCGGTTACCAATTCAAAACAGAGACACC 236
|||||| || ||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 192 GGTTCTGTTAATTTCCTGCGATGGTTTCCGGTTCGGTTACCAATTCAAGACAGAGACACC 251
Query 237 AAACATCGACCTGCTTATATCCAGAGGAACCGAAGCCAAGACCGGTTTAATTCCGGTTTT 296
||||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 252 AAACATCGATCTGCTCATATCCAGAGGTACCGAAGCTAAGACCGGTTTAATTCCGGTTTT 311
Query 297 CCCCACCATGACGTTCCCAAACCATTACTCAATCGCCACCGGACTTTACCCGGCTTCCCA 356
|||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||
Sbjct 312 CCCCACCATGACGTTCCCAAACCATTACTCAATCGCTACCGGACTCTATCCGGCTTCCCA 371
Query 357 CGGTATAATCATGAACAAATTTACCGATCCGGTAAGCGGGGAACTATTCAACAGGAACCT 416
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 372 CGGCATAATCATGAACAAATTTACCGATCCGGTAAGTGGGGAACTATTCAACAGGAACCT 431
Query 417 AAACCCTAAATGGTGGTTAGGTGAGCCATTGTGGGTGACGGCGGTGAACCAGGGGCTCAA 476
||||||||||||||||||||||||||| ||||||||||| || |||||||| |||||||
Sbjct 432 AAACCCTAAATGGTGGTTAGGTGAGCCGTTGTGGGTGACCGCAGTGAACCAAGGGCTCAT 491
Query 477 GGCTGCGACTTACTTTTGGCCAGGCGCTGACGTCCACAAAGGCTCTTGGAACTGCCCAAA 536
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 492 GGCTGCGACTTACTTTTGGCCAGGCGCTGACGTCCACAAAGGGTCTTGGAACTGCCCAAA 551
Query 537 AGGATTTTGCAAAGCTCCTTACAATGTTTCGGTTCCTCTAGAAGAAAGAGTCGATACGAT 596
||| ||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 552 AGGCTTTTGTAAAGCTCCTTACAATGTTTCAGTTCCTTTAGAAGAAAGAGTCGATACGAT 611
Query 597 TTTGAACTATTTCGATCTTCCAGAAAGCGAAATCCCCGATTTCATGGCTCTGTATTTCGA 656
||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||
Sbjct 612 CTTGAACTATTTCGATCTTCCAGAGAGAGAAATCCCTGATTTCATGGCTCTGTATTTCGA 671
Query 657 TGAACCGGACATACAAGGCCATGAGTACGGCCCTGATGATCCTCGCGTCACAGAAGCGGT 716
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 672 TGAACCGGACATACAAGGCCATGAGTACGGCCCTGATGATCCTCGCGTCACGGAAGCCGT 731
Query 717 CTCAAAGGTCGATAATATGATCGGTAGGATCATACGA-GGG-TTGAAGAAGAGAAAGGTT 774
||||||||||||||| ||||||||||||||||| | | ||| ||| ||||||| ||||||
Sbjct 732 CTCAAAGGTCGATAAAATGATCGGTAGGATCAT-C-ATGGGATTGGAGAAGAGGAAGGTT 789
Query 775 TTTAGTGATGTTCATGTGATATTGCTTGGTGATCACGGAATGGTTACTAACTGTGACAAG 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 790 TTTAGTGATGTTCATGTGATATTGCTTGGTGATCACGGAATGGTTACTAACTGTGACAAG 849
Query 835 AAAGTGATTTACATTGATGATTTAGCGGATTGGATCAAGATACCCGCGGATTGGATCCAA 894
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 850 AAAGTGATTTACATTGATGATTTAGCCGATTGGATCAAGATACCCGCGGATTGGATCCAA 909
Query 895 GATTATAGCCCCGTGCTAGCGATGAATCCGCGGTGGGGCAAAGATGTCAAGAATCCAGG- 953
|||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 910 GATTATAGTCCGGTGCTAGCGATGAATCCGCGCTGGGGCAAAGATGTCAAGAATCCAGGA 969
Query 954 CGAGAAGAATGCGGAACTTGTG-GCGAAGATGAACGAAGCTTTGAGCTCAGGGAAAGTAG 1012
| |||||||||| ||||| || | |||||||||||||||||||||||||||||||||||
Sbjct 970 C-AGAAGAATGCAGAACTCGTAAG-GAAGATGAACGAAGCTTTGAGCTCAGGGAAAGTAG 1027
Query 1013 CCAACGGAGAGTTTTTACAGGTATACTTGAAGGAGAATTTACCGCAAAGGCTACATTATT 1072
|||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 1028 CCAACGGAGAGTTTTTGCAGGTTTACTTGAAGGAGAATTTACCGCAAAGGCTGCATTATT 1087
Query 1073 CCGATAGCTCTCGGATTCCACCGATCATCGGAATGGTGGGAGAAGGTCTAATGGTTAAAC 1132
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1088 CCGATAGTTCTCGGATTCCACCGATCATCGGAATGGTGGGAGAAGGTCTAATGGTTAAAC 1147
Query 1133 AGAACAGAACAAACGTTCAAGAATGTTCCGGAAATCATGGATACGACAACATGTTCTTTT 1192
||||||||||| |||||||||||||||| |||| |||||||||||| || ||||||||||
Sbjct 1148 AGAACAGAACATACGTTCAAGAATGTTCTGGAACTCATGGATACGATAATATGTTCTTTT 1207
Query 1193 CCATGAGATCCATCTTTATTGGATATGGTCCAAGGTTTAGGAGTGGAAGGAAAGTGCCGT 1252
| |||||||| |||||| ||||||||||||||||||||||||| |||| |||||||| |
Sbjct 1208 CTATGAGATCAATCTTTGTTGGATATGGTCCAAGGTTTAGGAGAGGAATAAAAGTGCCAT 1267
Query 1253 CGTTTGAAAATGTTCAGGTCTATAATGCTGTTACAGAGATTCTCGGACTCCGACCAGCTC 1312
|||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1268 CGTTCGAGAATGTTCAGGTCTATAATGCTGTTGCAGAGATTCTCGGACTCCGACCAGCTC 1327
Query 1313 CGAACAACGGGTCTTCTTTGTTTACTCGTAGCCTTCTCTTGCCCTTTGGAGAAACATCGC 1372
|||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||| |
Sbjct 1328 CGAACAACGGTTCTTCTTTGTTTACTCGTAGTCTTCTCTTGCCATTTGGAGAAACATCAC 1387
Query 1373 AAGTAGAATGAAGCTAAATAAAAACCTAAGTTTGTTTCAGTATGGCTTTTAGTTTCGGAT 1432
|||||||||||||||||| || || ||||||||||| ||||||||| |||| ||||||||
Sbjct 1388 AAGTAGAATGAAGCTAAACAATAATCTAAGTTTGTTGCAGTATGGCGTTTACTTTCGGAT 1447
Query 1433 GCATTTT-AA-T----G--TTTCAGCTCTAAATCAATG-T--ATCAACACATAATGTGTT 1481
||||||| || | | ||| ||||||||||||||| | ||||||| ||||| ||||
Sbjct 1448 GCATTTTGAAGTTTTAGGCTTTTAGCTCTAAATCAATGGTGTATCAACAAATAATATGTT 1507
Query 1482 ATGGAA-TAATTTTGCTAGTATAAGACTAAAGTTTTACAAAGTTAAATAGACCTAAATTA 1540
||| || |||||||| |||||||||| ||| || | | | ||||||||||||||||||
Sbjct 1508 ATGAAAATAATTTTGTTAGTATAAGAATAATGTGCAAGATACTTAAATAGACCTAAATTA 1567
Query 1541 TTTGAAT 1547
|||||||
Sbjct 1568 TTTGAAT 1574
> AT4G29700.1 | Symbols: | Alkaline-phosphatase-like family protein
| chr4:14543457-14545138 REVERSE LENGTH=1682
Length=1682
Score = 953 bits (516), Expect = 0.0
Identities = 1025/1265 (81%), Gaps = 58/1265 (5%)
Strand=Plus/Plus
Query 156 CAAGAAACTCAACAAACCGGTGGTTCTATTGATTTCCTGCGACGGTTTCCGGTTCGGTTA 215
|||||| |||||||||||||||||| || |||| || ||||||||||||||||| |||||
Sbjct 170 CAAGAAGCTCAACAAACCGGTGGTTTTAATGATCTCTTGCGACGGTTTCCGGTTTGGTTA 229
Query 216 CCAATTCAAAACAGAGACACCAAACATCGACCTGCTTATATCCAGAGGAACCGAAGCCAA 275
|||||| ||||| || ||||||||||||||||| || |||||| ||||||| || |||||
Sbjct 230 CCAATTTAAAACGGACACACCAAACATCGACCTTCTCATATCCGGAGGAACTGAGGCCAA 289
Query 276 GAC-CGGTTTAATTCCGGTTTTCCCCACCATGACGTTCCCAAACCATTACTCAATCGCCA 334
|| ||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||| |
Sbjct 290 -ACACGGTTTAATCCCGGTTTTCCCCACCATGACATTCCCAAACCACTACTCTATCGCAA 348
Query 335 CCGGACTTTACCCGGCTTCCCACGGTATAATCATGAACAAATTTACCGATCCGGTAAGCG 394
||||||| |||||||||| ||||||||||||||||||||| |||||||||||||| | ||
Sbjct 349 CCGGACTCTACCCGGCTTACCACGGTATAATCATGAACAAGTTTACCGATCCGGTTA-CG 407
Query 395 GG-GAACTATTCAAC--AGGAACCTA-AACCCTAAATGGTGGTTAGGTGAGCCATTGTGG 450
|| || | |||||| ||| | || || || |||||||||||||||||||| |||||
Sbjct 408 GGAGAGGTGTTCAACAAAGG--CTTACAA-CCAAAATGGTGGTTAGGTGAGCCGCTGTGG 464
Query 451 GTGACGGCGGTGAACCAGGGGCTCAAGGCTGCGACTTACTTTTGGCCAGGCGCTGACG-T 509
|| || || || ||||| || |||||||||| ||| ||||||||||||||| |||| | |
Sbjct 465 GTAACCGCAGTAAACCAAGGTCTCAAGGCTGTGACCTACTTTTGGCCAGGCTCTGAAGTT 524
Query 510 CCACAAAGGCTCTTGGAAC-TGCCCAAAAGGAT-TT-TGCAAAGCTCCTTACAATGTTTC 566
| | ||| | |||||| || ||||| |||||| || | || | | || |||| ||||
Sbjct 525 CTA-AAAAGTTCTTGG-ACTTGCCCTGAAGGATATTGTCCACA--T--TT-CAATCTTTC 577
Query 567 GGTTCCTCTAGAAGAAAGAGTCGATACGATTTTGAACTATTTCGATCTTCC-AGAAAG-C 624
|||||| |||||||||| || ||| || | |||| | |||| |||| || | | | |
Sbjct 578 AGTTCCTTTAGAAGAAAGGGTTGATTCGGTCTTGAGCCATTTTGATC-ACCTTG-AGGAC 635
Query 625 GAAATCCCCGATTTCA-TGGCT-CTGTATTTCGATGAACCGGA-C-ATACAAGGCCATGA 680
||| | || ||||| | | | | ||||||||||||| || || | || | || ||| |
Sbjct 636 GAAGTTCCTGATTT-ACT-GATGTTGTATTTCGATGAGCCAGACCAAT-C-GGGTCATAA 691
Query 681 GTACGGCCCTGATGATCCTCGCGTCACAGA-AGCGGTCTCAAAGGTCGATAATATGATCG 739
|| || |||||||||||||| || || || || || || | ||| ||||| ||||| |
Sbjct 692 CTATGGTCCTGATGATCCTCGGGTTAC-GACTGCTGTTTCTAGGGTTGATAAAATGATTG 750
Query 740 GTAGGATCAT-ACGAGGGTTGAAGAAGAGAAAGGT-TTTTAGTGATGTTCATGTGATATT 797
||||| | || | | ||| ||||| |||| || | ||| | ||| ||||||||||||||
Sbjct 751 GTAGGGTGATAAAG-GGGCTGAAGCAGAGGGAGATCTTTGA-TGAGGTTCATGTGATATT 808
Query 798 GCTTGGTGATCACGGAATGGTTACTAAC--T--GTG--ACAAGAAAGTGATTTACATTGA 851
||||||||||||||||||||| || ||| | ||| || |||||| ||||||||||||
Sbjct 809 GCTTGGTGATCACGGAATGGTGACCAACTGTGAGTGTAACGAGAAAGCGATTTACATTGA 868
Query 852 TGATTTAGCGGATTGGATCAAGATACCCGCGGATTGGATCCAAGATTATAGCCCCGTGCT 911
||| |||||||||||||||||||||||||||| ||||||||| | ||| ||||| |||||
Sbjct 869 TGACTTAGCGGATTGGATCAAGATACCCGCGGCTTGGATCCAGGCTTACAGCCCAGTGCT 928
Query 912 AGCGATGAATCCGCGGTGGGGCAAAGATGTCAAGAATCCAGGCGAGAAGAATGCGGAACT 971
||| || ||||| | |||||| ||||||||| |||||| | |||| ||||| |||||| |
Sbjct 929 AGCAATCAATCCTCAGTGGGGGAAAGATGTCGAGAATCAAAGCGAAAAGAACGCGGAAGT 988
Query 972 TGTGGCGAAGATGAACGAAGCTTTGAGCTCAGGGAAAGTAGCCAACGGAGAGTTTTT-AC 1030
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 989 CGTGGCGAAGATGAACGAAGCTTTGAGCTCAGGGAAAGTAAAAAACGGAGAGTTTTTGAA 1048
Query 1031 AGGTATACTTGAAGGAGAATTTACC-GCAAAGGCTACATTATTCCGATAGCTCTCGGATT 1089
|| | |||||||||||||| |||| | | || || |||| ||| || || | |||||||
Sbjct 1049 AGTT-TACTTGAAGGAGAAGCTACCAG-AGAGACTGCATTTTTCAGAGAGTTATCGGATT 1106
Query 1090 CCACCGATCATCGGAATGGTGGGAGAAGGTCTAATGGTTAAACAGAACAGAACAAACGTT 1149
||||||||||| ||||| || ||||||||||||||||| | ||||||||||||||| | |
Sbjct 1107 CCACCGATCATAGGAATTGTCGGAGAAGGTCTAATGGTCAGACAGAACAGAACAAATGCT 1166
Query 1150 CAAGAATGTTCCGGAAATCATGGATACGACAAC-ATGTTCTTTTCCATGAG-ATCCATCT 1207
|||| || | ||| | ||||| || |||||| | | |||| || ||||| | | || |
Sbjct 1167 CAAGTTTGCTATGGAGACCATGGTTATGACAACGA-GCTCTTCTCGATGAGGA-CTATTT 1224
Query 1208 TTATTGGATATGGTCCAAGGTTTAGGAGTGGAAGGAAAGTGCCGTCGTTTGAAAATGTTC 1267
|| | ||| ||||| | |||||||| || |||| |||||||| || || || ||||| |
Sbjct 1225 TTGTCGGACATGGTTCTAGGTTTAGTAGAGGAAAAAAAGTGCCATCATTCGAGAATGTGC 1284
Query 1268 AGGTCTATAATG-CTGTTACAGAGATTCTCGGACTCCGACCAGCTCCGAACAACGGGTCT 1326
|| ||||||| | | ||| ||||| |||| ||||||||||||||||||||||| || |||
Sbjct 1285 AGATCTATAACGTC-GTTGCAGAGCTTCTTGGACTCCGACCAGCTCCGAACAATGGTTCT 1343
Query 1327 TCTTTGTTTACTCGTAGCCTTCTCTTGCCCTT-TGGAGAAACATCGCAAGTAGAATGAAG 1385
|||||||| |||| ||| |||||||||| || ||||| |||| | ||||| |||||||
Sbjct 1344 TCTTTGTTCCCTCGGAGCATTCTCTTGCC-TTCTGGAGCAACAAGGGAAGTAAAATGAAG 1402
Query 1386 CTAAA 1390
||||
Sbjct 1403 -TAAA 1406
> AT4G29710.1 | Symbols: | Alkaline-phosphatase-like family protein
| chr4:14547001-14547402 REVERSE LENGTH=402
Length=402
Score = 339 bits (183), Expect = 7e-92
Identities = 323/391 (83%), Gaps = 8/391 (2%)
Strand=Plus/Plus
Query 982 ATGAACGAAGCTTTGAGCTCAGGGAAAGTAGCCAACGGAGAGTTTTT-ACAGGTATACTT 1040
|||||||||||||||||||||||||||||| |||||||||||||| || | | |||||
Sbjct 1 ATGAACGAAGCTTTGAGCTCAGGGAAAGTAAAAAACGGAGAGTTTTTGACTGTT-TACTT 59
Query 1041 GAAGGAGAATTTACCGCAAAGGCTACATTATTCCGATAGCTCTCGGATTCCACCGATCAT 1100
||||||||| |||||| | || || ||||||||| | || | |||||||||||| |||||
Sbjct 60 GAAGGAGAAGTTACCGGACAGACTGCATTATTCCCAGAGTTATCGGATTCCACCAATCAT 119
Query 1101 CGGAATGGTGGGAGAAGGTCTAATGGTTAAACAGAACAGAACAAACGTTCAAGAATGTTC 1160
|||||||| |||||||||||||| || | ||| || ||||| || | ||||||||| |
Sbjct 120 AGGAATGGTCGGAGAAGGTCTAATTGTCAGACAAAATAGAACTAATGCTCAAGAATGCTA 179
Query 1161 CGGAAATCATGGATACGACAACATGTTCTTTTCCATGAG-ATCCATCTTTATTGGATATG 1219
|||| | ||||| || ||||||| |||||| || ||||| | | || ||| | ||| |||
Sbjct 180 CGGAGACCATGGTTATGACAACAAGTTCTTCTCAATGAGGA-CTATTTTTGTCGGACATG 238
Query 1220 GTCCAAGGTTTAGGAGTGGAAGGAAAGTGCCGTCGTTTGAAAATGTTCAGGTCTATAATG 1279
|| | ||||||||||| |||| ||||||||| |||||||| ||||| ||| |||||| |
Sbjct 239 GTTCTAGGTTTAGGAGAGGAAAGAAAGTGCCATCGTTTGAGAATGTGCAGATCTATAGCG 298
Query 1280 -CTGTTACAGAGATTCTCGGACTCCGACCAGCTCCGAACAACGGGTCTTCTTTGTTTACT 1338
| ||| |||| ||||| ||||||||||||||||||||||| || ||||||||||| ||
Sbjct 299 TC-GTTGCAGATATTCTTGGACTCCGACCAGCTCCGAACAATGGTTCTTCTTTGTTCCCT 357
Query 1339 CGTAGCCTTCTCTTGCCCTTTG-GAGAAACA 1368
|| ||| |||||||||| ||| ||| ||||
Sbjct 358 CGGAGCATTCTCTTGCC-TTTCAGAGCAACA 387
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76355028945
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5