BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491807
Length=1533
Score E
Sequences producing significant alignments: (Bits) Value
AT4G29510.1 | Symbols: ATPRMT11, PRMT11, ATPRMT1B, PRMT1B | arg... 2283 0.0
AT2G19670.1 | Symbols: ATPRMT1A, PRMT1A | protein arginine meth... 994 0.0
> AT4G29510.1 | Symbols: ATPRMT11, PRMT11, ATPRMT1B, PRMT1B | arginine
methyltransferase 11 | chr4:14491625-14494001 FORWARD
LENGTH=1536
Length=1536
Score = 2283 bits (1236), Expect = 0.0
Identities = 1450/1548 (94%), Gaps = 36/1548 (2%)
Strand=Plus/Plus
Query 1 AAATAAAAAGCTTCGCGTCTTCCTAAAACCCTAATCTTGCGACTTCGTCTCTATCCCC-A 59
|||| |||||||||| |||||| |||||||||||||| |||||||||||||||||||| |
Sbjct 10 AAATTAAAAGCTTCGTGTCTTCATAAAACCCTAATCTCGCGACTTCGTCTCTATCCCCAA 69
Query 60 AAA-----TCC-CTCTT-GTTC------GAGACCGAGaaaaaaaaGATGACTAAGAACAG 106
||| ||| ||||| ||| ||||||||| ||||||||||||||||||||||
Sbjct 70 AAACCCTTTCCTCTCTTCCTTCTTGTGTGAGACCGAG-AAAAAAAGATGACTAAGAACAG 128
Query 107 TAACGACAACGAGCATGAGTTCATCAGCTTTGAACCTAATCAGAACACGAAGATACGCTT 166
|||| || ||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 129 TAACCACGACGAGAATGAGTTCATCAGCTTTGAACCAAATCAGAACACGAAGATACGCTT 188
Query 167 TGAAGATGCTGATGAAGACGAAGTTGCTGAAGGGTCTGGTGTTGCCGGTGAGGAAGCTGC 226
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |
Sbjct 189 TGAAGATGCTGATGAAGACGAAGTTGCTGAAGGGTCTGGTGTTGCCGGCGAGGAAACTCC 248
Query 227 CCAAGATGAATCCATGTTCGACGCCGGAGAGAGCGCCGACACCGCTGATGTCACTGATGA 286
||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 249 CCAAGATGAGTCCATGTTCGACGCCGGAGAGAGCGCCGACACCGCTGAAGTAACTGATGA 308
Query 287 TACCACCAGCGCCGATTACTACTTCGATTCTTACTCTCACTTCGGAATCCATGAAGAGAT 346
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 309 TACCACCAGTGCCGATTACTACTTCGATTCTTACTCTCACTTTGGAATCCATGAAGAGAT 368
Query 347 GTTAAAGGATGTAGTGAGAACGAAGACTTATCAGAATGTTATTTATCAGAACAAGTTTCT 406
||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 369 GTTGAAGGATGTTGTGAGAACAAAGACTTATCAGAATGTTATTTATCAGAACAAGTTTCT 428
Query 407 TATCAAGGACAAAATTGTTCTTGATGTTGGAGCTGGAACTGGTATTTTGTCTCTGTTCTG 466
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 429 TATCAAGGACAAAATTGTTCTTGATGTTGGAGCTGGAACCGGAATTTTGTCTCTGTTCTG 488
Query 467 TGCCAAGGCAGGAGCAGCTCATGTCTACGCTGTTGAATGTTCGCAAATGGCTGACATGGC 526
||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 489 TGCCAAGGCAGGAGCTGCTCATGTCTACGCTGTTGAGTGTTCTCAAATGGCTGACATGGC 548
Query 527 AAAGGAGATTGTTAAAGCCAATGGATTTTCTGATGTTATTACGGTTTTGAAAGGGAAGAT 586
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 549 AAAGGAGATTGTTAAAGCTAATGGATTTTCTGATGTTATTACGGTATTGAAAGGGAAGAT 608
Query 587 TGAGGAGATAGAGCTTCCCACTCCTAAAGTGGATGTGATTATATCTGAATGGATGGGTTA 646
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 609 TGAGGAGATAGAGCTTCCCACTCCTAAAGTGGATGTGATTATATCGGAATGGATGGGTTA 668
Query 647 CTTTTTGTTGTTTGAAAATATGTTGGATAGTGTCTTATACGCTCGTGATAAATGGCTTGT 706
||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||
Sbjct 669 CTTTTTGTTGTTTGAAAATATGTTGGACAGTGTCTTGTATGCTCGTGATAAATGGCTTGT 728
Query 707 TGATGGTGGAGTTGTGCTTCCAGACAAAGCCTCCCTGCATCTTACAGCCATAGAGGATTC 766
||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 729 TGAAGGTGGAGTTGTGCTACCAGACAAAGCCTCTCTGCATCTTACAGCCATAGAGGATTC 788
Query 767 GGAGTACAAAGAAGACAAAATAGAATTTTGGAACAGTGTGTATGGTTTTGACATGTCATG 826
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 789 AGAGTACAAAGAAGACAAAATCGAATTTTGGAACAGTGTGTATGGTTTTGACATGTCATG 848
Query 827 TATCAAGAAAAAAGCTATGATGGAACCACTTGTTGACACAGTCGACCAAAACCAAATCGT 886
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 849 TATTAAGAAAAAAGCTATGATGGAACCACTTGTTGACACAGTCGACCAAAACCAAATCGT 908
Query 887 TACCGATAGTAGGCTTCTAAAGACCATGGACATCTCAAAGATGTCTTCTGGTGATGCTTC 946
||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||
Sbjct 909 CACCGATAGTAGGCTTCTAAAGACGATGGATATCTCAAAGATGTCCTCTGGTGATGCTTC 968
Query 947 CTTCACAGCTCCCTTTAAGCTTGTTGCACAACGCAATGACTACATCCACGCCCTTGTAGC 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 969 CTTCACAGCTCCCTTTAAGCTTGTTGCACAACGCAATGACTACATCCACGCCCTTGTAGC 1028
Query 1007 CTACTTTGATGTATCGTTTACCATGTGCCACAAGCTGCTGGGTTTCTCAACAGGACCGAA 1066
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1029 CTACTTTGATGTATCGTTTACCATGTGCCACAAGCTGCTGGGCTTCTCAACAGGACCGAA 1088
Query 1067 ATCCCGAGCTACACACTGGAAGCAAACAGTTCTGTACCTAGAAGATGTGTTAACCATATG 1126
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 1089 ATCCCGAGCTACACACTGGAAACAAACAGTTCTGTATCTAGAAGATGTGTTAACCATATG 1148
Query 1127 TGAGGGTGAGACAATCACTGGAACCATGTCTGTTTCTCCTAACAAGAAGAATCCACGAGA 1186
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct 1149 TGAGGGTGAGACAATCACTGGAACTATGTCCGTTTCTCCTAACAAGAAGAATCCTCGAGA 1208
Query 1187 CATTGACATAAAGCTAAGCTATTCTTTGAATGGCCAGCATTGCAAGATCTCAAGGACCCA 1246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1209 CATTGACATAAAGCTAAGCTATTCTTTGAATGGCCAGCATTGCAAGATCTCAAGGACCCA 1268
Query 1247 ACACTACAAAATGCGTTAAAGTTCTCTCATAAGAAGCAGAACTTCAGAAGATACAATTCT 1306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1269 ACACTACAAAATGCGTTAAAGTTCTCTCATAAGAAGCAGAACTTCAGAAGATACAATTCT 1328
Query 1307 CAAATTGTGATTTAGATTTTGTATTTCttttttttccagatttccaaatttccatttgct 1366
|| |||||||||||| |||| ||||||||||| | ||||||| | || ||||||||||||
Sbjct 1329 CATATTGTGATTTAGTTTTTATATTTCTTTTTCT-CCAGATTAC-AACTTTCCATTTGCT 1386
Query 1367 tcacattgcaacatttgtttttgtttttcTTCTCAAGCTAAATTAATGATTTTGCTCTAA 1426
||||||||||||||||| || | ||||||| ||||||||||||||||||||||
Sbjct 1387 TCACATTGCAACATTTGCTT--------CATCTCAAGTTAAATTAATGATTTTGCTCTAA 1438
Query 1427 ACCATCTCGTGTATGTTCCTTCTTGTATCACAGAACTGATGTCTCTCAAGTCTCAAAAAT 1486
||||||||||||||||||||| ||| |||||| ||||||||||| |||| | | |
Sbjct 1439 ACCATCTCGTGTATGTTCCTTGTTG-ATCACAAAACTGATGTCTGTCAA--CAC-----T 1490
Query 1487 ACTTTCAATATTCTCTCCAAA-GATTATAGAAACTAAACGAACTCTAC 1533
||||||||||||||||||| |||||||||||||||| ||| |||||
Sbjct 1491 --TTTCAATATTCTCTCCAAAAGATTATAGAAACTAAAGGAAATCTAC 1536
> AT2G19670.1 | Symbols: ATPRMT1A, PRMT1A | protein arginine methyltransferase
1A | chr2:8499086-8501181 REVERSE LENGTH=1360
Length=1360
Score = 994 bits (538), Expect = 0.0
Identities = 855/1009 (85%), Gaps = 17/1009 (2%)
Strand=Plus/Plus
Query 273 GATGTCACTGATGATACCACCAGCGCCGATTACTACTTCGATTCTTACTCTCACTTCGGA 332
||||| ||||||| | ||||||||||||||||||||||||||||||||||| |||||
Sbjct 176 GATGTTGCTGATGACATTACCAGCGCCGATTACTACTTCGATTCTTACTCTCATTTCGGT 235
Query 333 ATCCATGAAGAGATGTTAAAGGATGTAGTGAGAACGAAGACTTATC-AGAATGTTATTTA 391
|| |||||||| |||||||||||||||||||| || |||| ||||| || ||||||||||
Sbjct 236 ATTCATGAAGAAATGTTAAAGGATGTAGTGAGGACAAAGAGTTATCAAG-ATGTTATTTA 294
Query 392 TC-AGAACAAGTTTCTTATCAAGGACAAAATTGTTCTTGATGTTGGAGCTGGAACTGGTA 450
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 295 -CAAGAACAAGTTTCTTATCAAGGACAAAATTGTTCTTGATGTTGGAGCTGGAACTGGAA 353
Query 451 TTTTGTCTCTGTTCTGTGCCAAGGCAGGAGCAGCTCATGTCTACGCTGTTGAATGTTCGC 510
| |||||||| |||||||| || |||||||||||||| || ||||| ||||| ||||| |
Sbjct 354 TCTTGTCTCTCTTCTGTGCTAAAGCAGGAGCAGCTCACGTTTACGCAGTTGAGTGTTCTC 413
Query 511 AAATGGCTGACATGGCAAAGGAGATTGTTAAAGCC-AATGGATTTTCTGATGTTATTACG 569
|||||||||||| ||||||||||||||||| | | |||||||| || |||||||| |||
Sbjct 414 AAATGGCTGACACAGCAAAGGAGATTGTTAA-GTCGAATGGATTCTCAGATGTTATAACG 472
Query 570 GTTTTGAAAGGGAAGATTGAGGAGATAGAGCTTCCCACT-CCTAAAGTGGATGTGATTAT 628
|||||||||||||||||||||||||| || ||||| | | ||||||||||||||||||||
Sbjct 473 GTTTTGAAAGGGAAGATTGAGGAGATCGAACTTCC-AGTTCCTAAAGTGGATGTGATTAT 531
Query 629 ATCTGAATGGATGGGTTACTTTTTGTTGTTTGAAAATATG-TTGGATAGTGTCTTATACG 687
||||||||||||||||||||| |||||| |||||||||| ||| | | ||||| || |
Sbjct 532 CTCTGAATGGATGGGTTACTTTCTGTTGTATGAAAATATGCTTG-ACACCGTCTTGTATG 590
Query 688 CTCGTGATAAATGGCTTGTTGATGGTGGAGTTGTGCTTCCAGACAAAGCCTCCCTGCATC 747
|||| ||||||||||||||||||||||| |||| || ||||| ||||| || || ||
Sbjct 591 CTCGCAATAAATGGCTTGTTGATGGTGGAATTGTTCTACCAGATAAAGCTTCTCTTTATG 650
Query 748 TTACAGCCATAGAGGATTCGGAGTACAAAGAAGACAAAATAGAATTTTGGAAC-AGTGTG 806
|||| ||||| |||||| | | || ||||| |||||| |||| |||||| || | |||
Sbjct 651 TTACTGCCATTGAGGATGCTCATTATAAAGACGACAAAGTAGAGTTTTGGGACGAC-GTG 709
Query 807 TATGGTTTTGACATGTCATGTATCAAGAAAAAAGCTATGATGGAACCACTTGTTGACACA 866
||||| ||||||||||| || ||||||| || ||| || | ||||| |||||||||||
Sbjct 710 TATGGGTTTGACATGTCGTGCATCAAGAGAAGAGCAATTACAGAACCGCTTGTTGACACC 769
Query 867 GTCGACCAAAACCAAATCGTTACCGATAGTAGGCTTCTAAAGACCATGGACATCTCAAAG 926
|| || ||||||||||| || ||||| | ||| || ||||| ||||| ||||| |||
Sbjct 770 GTTGATGGTAACCAAATCGTGACTGATAGCAAGCTGCTGAAGACAATGGATATCTCTAAG 829
Query 927 ATGTCTTCTGGTGATGCTTCCTTCACAGCTCCCTTTAAGCTTGTTGCACAACGCAATGAC 986
||| || |||| |||||||||||||||||||| |||||||| || |||||||| ||||||
Sbjct 830 ATGGCTGCTGGAGATGCTTCCTTCACAGCTCCGTTTAAGCTCGTCGCACAACGAAATGAC 889
Query 987 TACATCCACGCCCTTGTAGCCTACTTTGATGTATCGTTTACCATGTGCCACAAGCTGCTG 1046
| ||||| ||||||||||||||||| ||||| || || || ||||| |||||| | ||
Sbjct 890 CATATCCATGCCCTTGTAGCCTACTTCGATGTGTCATTCACTATGTGTCACAAGAAGATG 949
Query 1047 GGTTTCTCAACAGGACCGAAATCCCGAGCTACACACTGGAAGCAAACAGTTCTGTACCTA 1106
||||||||||||||||||||||| || ||||| || ||||| ||||| || ||||||||
Sbjct 950 GGTTTCTCAACAGGACCGAAATCGCGGGCTACGCATTGGAAACAAACTGTGCTGTACCTG 1009
Query 1107 GAAGATGTGTTAACCATATGTGAGGGTGAGACAATCACTGGAACCATGTCTGTTTCTCCT 1166
|||||||||||||||||||| |||||||| |||||||| |||| |||| | || | |
Sbjct 1010 GAAGATGTGTTAACCATATGCGAGGGTGAAACAATCACAGGAAGCATGACCATTGCACAA 1069
Query 1167 AACAAGAAGAATCC-ACGAGACATTGACATAAAGCTAAGCTATTCTTTGAATGGCCAGCA 1225
||||| |||||||| | ||||| | ||||||||||| |||||||||||||| ||||| ||
Sbjct 1070 AACAAAAAGAATCCCA-GAGACGTCGACATAAAGCTCAGCTATTCTTTGAACGGCCAACA 1128
Query 1226 TTGCAAGATCTCAAGGACCCAACA-CTACAAAATGCGTTAAA-GTTCTC 1272
|||||| |||||||||||||| | ||| || ||||| |||| | ||||
Sbjct 1129 TTGCAATATCTCAAGGACCCA-CTTCTATAAGATGCGCTAAAAGCTCTC 1176
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75652221315
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5