BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491827 Length=434 Score E Sequences producing significant alignments: (Bits) Value AT4G29285.1 | Symbols: LCR24 | low-molecular-weight cysteine-ri... 641 0.0 AT4G13095.1 | Symbols: LCR37 | low-molecular-weight cysteine-ri... 257 5e-68 > AT4G29285.1 | Symbols: LCR24 | low-molecular-weight cysteine-rich 24 | chr4:14431526-14432290 FORWARD LENGTH=435 Length=435 Score = 641 bits (347), Expect = 0.0 Identities = 407/436 (93%), Gaps = 4/436 (1%) Strand=Plus/Plus Query 1 ATTTCTCTATACCATTTTCAATATCAAAAAGTTTCTTCAAACAAACAAGTATTAGATTAA 60 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATTTCTCTCTACCATTTTCAATATCAAAAAGTTTCTTCAAACAAACAAGTATTAGATTAA 60 Query 61 CACTATCTTCTTAATTTTCAGAAATTCATGGCTAAACTATTATGTTCGTATCTATTCATC 120 || |||| |||| |||||||| ||||||||||||||||| ||| |||||||||||||||| Sbjct 61 CATTATCCTCTTCATTTTCAGCAATTCATGGCTAAACTAATATATTCGTATCTATTCATC 120 Query 121 TCCATGTTTGTTCTCTCAGtttttttGGCTTTGCCAAATGCAGAGGGAGCGAATATAAAA 180 ||||||||||||||||||||| ||||||| |||||||||||||| |||||| |||| ||| Sbjct 121 TCCATGTTTGTTCTCTCAGTTCTTTTGGCGTTGCCAAATGCAGAAGGAGCGGATATTAAA 180 Query 181 AGATGTGTTGTGGACGTGAAGCTTAGCAAGCCATGCACTTTTCAAGAATGCATACCACTT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 AGATGTGTTGTGGACGTGAAGCTTAGCAAGCCATGCACTTTTCAAGAATGCATACCACTT 240 Query 241 TGTTTTCAAAAGTACAACGGGAATGGCGTTTGTACCGGAAATAAAAACCAAATTTGCACT 300 |||||||||| |||||| ||||||||||||||||||||||| |||||| ||||||||||| Sbjct 241 TGTTTTCAAAGGTACAATGGGAATGGCGTTTGTACCGGAAAGAAAAACGAAATTTGCACT 300 Query 301 TGCGCTTACAACTGTTAAGCTA-A-TATGTTTGTTAAACTAGACCAAAAATCTTTAATGT 358 ||||| ||||| |||||||||| | |||||| |||| |||||||||||||||||||||| Sbjct 301 TGCGCCTACAATTGTTAAGCTATAATATGTT-GTTAG-CTAGACCAAAAATCTTTAATGT 358 Query 359 TATGGTGCCTTAATAATCCTTGACTTCATGTATTTGGAGAATATGATAATATGAATAAAG 418 |||||||||||| |||||||||||| ||||||||||||| ||||||| |||||||||||| Sbjct 359 TATGGTGCCTTAGTAATCCTTGACTCCATGTATTTGGAGGATATGATCATATGAATAAAG 418 Query 419 ATCTATTAAATATTCT 434 |||| |||||| |||| Sbjct 419 ATCTTTTAAATTTTCT 434 > AT4G13095.1 | Symbols: LCR37 | low-molecular-weight cysteine-rich 37 | chr4:7634993-7635483 FORWARD LENGTH=234 Length=234 Score = 257 bits (139), Expect = 5e-68 Identities = 205/236 (87%), Gaps = 7/236 (3%) Strand=Plus/Plus Query 88 ATGGCTAAACTATTATGTTCGTATCTATTCATCTCCATGTTTGTTCTCTCAGtttttttG 147 ||||| |||| ||| ||||| ||| | ||||||||||||||| ||||||||| ||||||| Sbjct 1 ATGGCCAAACAATTGTGTTCTTATATGTTCATCTCCATGTTTATTCTCTCAGCTTTTTTG 60 Query 148 GCTTTGCCAAATGCAGA--G-GGAGCGAATATAAAAAGATGTGTTGTGGACGTGAAGCTT 204 |||||||||| |||||| | ||||||| |||||||| |||||||||||||||||| ||| Sbjct 61 GCTTTGCCAAGTGCAGAGGGAGGAGCGACTATAAAAAAATGTGTTGTGGACGTGAAACTT 120 Query 205 AGCAAGCCATGCACTTTTCAAGAATGC-ATACCACTTTGTTTTCAAAAGTACAACGGGAA 263 ||||||||||||||||||||||||||| | |||||||||| |||||||||| |||||||| Sbjct 121 AGCAAGCCATGCACTTTTCAAGAATGCCA-ACCACTTTGTCTTCAAAAGTATAACGGGAA 179 Query 264 TGGCGTTTGTACCGGAAATAAAAACCAA-ATTTGCACTTGCGCTTACAACTGTTAA 318 |||| ||||| ||||| || | ||| || |||||| |||| | |||||| || ||| Sbjct 180 TGGCCTTTGTCCCGGAGATGACAAC-AATATTTGCGCTTGTGTTTACAATTGCTAA 234 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 20609777090 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5