BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491901
Length=2025
Score E
Sequences producing significant alignments: (Bits) Value
AT4G28620.1 | Symbols: ATATM2, ATM2 | ABC transporter of the mi... 1664 0.0
AT4G28630.1 | Symbols: ATM1, ATATM1 | ABC transporter of the mi... 1125 0.0
> AT4G28620.1 | Symbols: ATATM2, ATM2 | ABC transporter of the
mitochondrion 2 | chr4:14135526-14137953 REVERSE LENGTH=2043
Length=2043
Score = 1664 bits (901), Expect = 0.0
Identities = 1127/1230 (92%), Gaps = 39/1230 (3%)
Strand=Plus/Plus
Query 1 ATGATGAGA-TTATCGCAGCTCCAACTCTGTCACACTTCTCTGTCTTACCGTCTTCGCTC 59
||||||||| || || || ||||||||||||| ||||||||| || ||||||||||||||
Sbjct 1 ATGATGAGAGTT-TCTCAACTCCAACTCTGTCGCACTTCTCTTTCGTACCGTCTTCGCTC 59
Query 60 TGG-T-T-ATCATCATCATCATGTTCATCACAGTTTCTCCAGGCTCATCAAACGTAACTC 116
||| | | |||||||||||||| |||| |||||||||| || ||||||||||||||||||
Sbjct 60 TGGTTATCATCATCATCATCATCTTCACCACAGTTTCTTCAAGCTCATCAAACGTAACTC 119
Query 117 AATTCTTGAATCTGCACCTATC-AATGCATATAACTCTAA--TCCATCTCCGATCACTCC 173
||||||||||||| |||||| | ||||||| | | || || |||||| ||||| |||||
Sbjct 120 AATTCTTGAATCTCCACCTA-CTAATGCATCTCA-TC-AATCTCCATCCCCGATTACTCC 176
Query 174 AATGGTCAACGCACGCGTTATGTTCTTCTCAACTTCAACTTCAGCTCCAAATCAAGATCA 233
||||||||||||||||| ||||||||||| ||||||||||||||||| | | ||
Sbjct 177 TATGGTCAACGCACGCGTCATGTTCTTCTCCACTTCAACTTCAGCTCC--A-C---AT-- 228
Query 234 GACCACCTCTAAACCTGATAATCAAATCAACACGACGTCGTCGGAGAAGATCCTCCGCAT 293
| | | || | ||||||||| ||||||||||||||| ||||| || ||
Sbjct 229 ------C-C---A---GA-GA--AAATCAACAGGACGTCGTCGGAGAATATCCTTCGGAT 272
Query 294 GATTTCAAGCTACCTATGGATGAAAGACAACCCAAAACTAC-GTTTCAGAGTCATCACTG 352
|||||||||||| |||||||||||||||||||||||||| | |||||||||||||| |||
Sbjct 273 GATTTCAAGCTATCTATGGATGAAAGACAACCCAAAACT-CTGTTTCAGAGTCATCTCTG 331
Query 353 CTTTAGCGTGTCTCGTGGGAGCCAAGTTCTTGAATGTTCAAGTTCCTTTCCTCTTCAAAG 412
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 332 CTTTTGCGTGTCTCGTGGGAGCTAAGTTCTTGAATGTTCAAGTTCCTTTCCTCTTCAAAG 391
Query 413 TAGCTATAGATTGGCTCTCTTCATCTTCATTTGTTGATTCAAATCCTTTTCTAGTTGCTG 472
||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||
Sbjct 392 TAGCTATAGATTGGCTCTCTTCATCTTCATTCGTTGATTCAAACCCTTACCTAGTTGCTG 451
Query 473 CTTTCGCTACTCCTTCCTCTGTTCTCATTGGTTATGGCATTGCTCGATCTGGATCTTCCG 532
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 452 CTTTCGCTACTCCTTCCTCTGTTCTCATTGGTTATGGCATTGCTCGATCTGGTTCTTCTG 511
Query 533 CTTTTAACGAGCTTCGTACTAGTGTTTTCTCCAAAGTAGCTCTCCACACCATACGAACCA 592
|||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 512 CTTTCAACGAGCTTCGTACTAGTGTTTTCTCCAAAGTAGCTCTCCGCACCATACGAACCA 571
Query 593 TCTCTAGAAAAGTGCTCTCGCGTTTACACGATCTCGATCTTCGTTACCACT-TGAATCGA 651
||||||||||||| ||||||||||||||||||||||||||||||||||| | | ||| ||
Sbjct 572 TCTCTAGAAAAGTTCTCTCGCGTTTACACGATCTCGATCTTCGTTACCA-TCTAAATAGA 630
Query 652 GAAACAGGAGCTTTGAACAGAATCATTGATCGTGGTAGCCGCGCTATAAACACGATTCTC 711
|| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 631 GACACAGGTGCTTTGAACAGAATCATTGATCGTGGAAGCCGCGCTATAAACACGATTCTC 690
Query 712 TCAGCTATGGTTTTCAACATTGTTCCCACGATCTTGGAGATATCAATGGTCTCATTTACA 771
||||||||||||||||||||| | ||||||||||||||||||||||||||||||| || |
Sbjct 691 TCAGCTATGGTTTTCAACATTATGCCCACGATCTTGGAGATATCAATGGTCTCATGTATA 750
Query 772 TTAGCATACAAATTCGGAGTTGTCTATGCATTGATTACTTGTCTTTCTGTTGGATCATAT 831
|||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct 751 TTAGCATACAAATTTGGAGCTGTTTATGCATTGATTACTTGTCTTTCTGTTGGATCATAT 810
Query 832 ATAGCTTTCACATTGGCTTTGACACAGTGGAGAATCAAGATTAGAAAAGCTATGAATGAA 891
||||| ||||| |||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct 811 ATAGCATTCACGTTGGCTATGACGCAGTGGAGAATCAAGATTAGAAAAGCTATGAATGAA 870
Query 892 GCCGAAAACGATGCTAGCACAAGAGCCATTGACTCTCTCATAAACTACGAGACTGTTAAG 951
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 871 GCTGAAAACGATGCTAGCACCAGAGCCATTGACTCTCTCATAAACTACGAGACTGTTAAG 930
Query 952 TATTTCAACAACGAAGATTACGAAGCTCGAAAGTATGATCAGTTACACGAAAATTACGAA 1011
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 931 TATTTCAACAACGAAGATTACGAAGCTCGAAAGTACGATCAGTTACACGAAAATTACGAA 990
Query 1012 GATGCTGCATTGCAAAGTCGGAAAAGTTTTGCCTTGTTAAATTTTGGACAGAGTGTTATA 1071
|||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||
Sbjct 991 GATGCTGCATTGCAAAGTCGGAAAAGCTTTGCCTTATTAAATTTTGGACAGAGTTTTATA 1050
Query 1072 TTTAGCACAGCTTTGTCAACAGCAATGGTGTTGTGTTCTCAAGGGATTATGAATGGTCAG 1131
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1051 TTTAGTACAGCTTTGTCAACAGCAATGGTGTTGTGTTCTCAGGGGATTATGAATGGTCAG 1110
Query 1132 ATGACAGTTGGTGATTTGGTGATGGTGAATGGTCTTCTCTTTCAATTGTCTCTTCCTCTT 1191
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct 1111 ATGACAGTTGGTGATTTGGTGATGGTGAATGGTCTCCTCTTTCAACTGTCTCTTCCTCTT 1170
Query 1192 TATTTTCTCGGTGTTGTTTATAGCGACACC 1221
|| |||||||| |||||||| |||||||||
Sbjct 1171 TACTTTCTCGGGGTTGTTTACAGCGACACC 1200
Score = 1192 bits (645), Expect = 0.0
Identities = 753/806 (93%), Gaps = 4/806 (0%)
Strand=Plus/Plus
Query 1222 CTAGAGGAAAGATCCGATATCGGAGATAAAGATATAGACAGGAAGTTCCCTACTCTTGTT 1281
|||||||| ||||| |||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1240 CTAGAGGAGAGATCTGATATCGGAGATAAAGATATAGACAGGAAGCTCCCTCCTCTTGTT 1299
Query 1282 CTGAAAGGTGGAAGCATTAGTTTTGAGAATGTACACTTTAGTTATCTGCCGGAGAGAAAG 1341
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 1300 CTGAAAGGTGGAAGCATTAGTTTTGAGAATGTACATTTTAGTTATCTACCGGAGAGAAAG 1359
Query 1342 ATTTTAGATGGGATTTCATTTGAGGTACCGGCGGGGAAAAGTGTGGCGATTGTTGGTAGT 1401
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 1360 ATTTTAGATGGGATTTCATTTGAGGTACCGGCAGGGAAAAGTGTGGCGATTGTCGGTAGT 1419
Query 1402 AGCGGGAGCGGAAAATCGACGATTCTTAGAATGATATTCAGATTCTTTGACACAGATTCC 1461
||||| |||||||||||||| |||||||||||||||||||| |||||||| |||||||
Sbjct 1420 AGCGGAAGCGGAAAATCGACTATTCTTAGAATGATATTCAGGTTCTTTGATGTAGATTCC 1479
Query 1462 GGAAATGTAAAGATTGATGGTCAGAATATAAAGGAAGTGAG-TTTGAAGAGTCTTCGAAG 1520
||||||||||| |||||||||||| |||||||||||||||| | | |||||||| ||||
Sbjct 1480 GGAAATGTAAAAATTGATGGTCAGGATATAAAGGAAGTGAGACTAG-AGAGTCTTAGAAG 1538
Query 1521 CTCCATTGGAGTTGTCCCTCAAGATACTGTGCTCTTCAACGACACTATATTTCACAACAT 1580
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1539 CTCCATTGGAGTTGTCCCTCAAGATACTGTGCTCTTTAACGACACTATATTTCACAACAT 1598
Query 1581 TCACTATGGAAACCTTTCAACAACAGAGGAAGAGGTGTACGATGCAGCTCGGCGAGCAGC 1640
||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||
Sbjct 1599 TCACTATGGAAACCTTTCAGCAACAGAGGAAGAGGTGTACAATGCAGCTCGACGAGCAGC 1658
Query 1641 GATTCACGACATGATCATGAAATTCCCGGATAAATATTCAACCGCGGTGGGAGAAAGAGG 1700
||||||||| | ||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1659 GATTCACGATACGATCATGAAATTCCCTGATAAATATTCGACCGCGGTGGGAGAAAGAGG 1718
Query 1701 GCTGATGCTGAGTGGTGGAGAGAAACAGAGAGTAGCACTTGCTCGTGCATTTCTAAAATC 1760
|||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct 1719 GCTGATGCTGAGTGGTGGAGAGAAACAGAGGGTGGCACTTGCTCGTGCATTTCTGAAATC 1778
Query 1761 ACCAGTGATTATGTTGTGTGACGAAGCGACTAGTGCGCTCGACAGTAAAACCGAGGCAGA 1820
||||| || | |||||||||||||| || ||||| |||||||||||||||||||||||
Sbjct 1779 ACCAGCAATCCTATTGTGTGACGAAGCAACAAGTGCACTCGACAGTAAAACCGAGGCAGA 1838
Query 1821 GATAATGAAATCGCTGAGGTCGCTAGCGAGTAACAGAAATTGCATTTTCATTGCACATAG 1880
|||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 1839 GATAATGAAAACGCTGAGGTCGCTAGCGAGTAACAGGACTTGCATTTTCATTGCACATAG 1898
Query 1881 ACTGACCACTGTAATGCAATGTGATGAGATTAT-AGTAATGGAGAAAGGGAAAGTGGTGG 1939
||||||||||| |||||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct 1899 ACTGACCACTGCAATGCAATGTGATGAGAT-ATTAGTAATGGAGAAAGGAAAAGTGGTGG 1957
Query 1940 GAAAAGGGACACACCAAGTGCTGTTGGGAAAATCTGGAAGATACGCCAAATTATGGACAC 1999
||||||||||||| ||||| ||||||| |||||||| |||||||| |||||||||||||
Sbjct 1958 AAAAAGGGACACACGAAGTGTTGTTGGGGAAATCTGGCAGATACGCTAAATTATGGACAC 2017
Query 2000 AACAAAACAGTAAATTGGAGGTGTGA 2025
||||||||||||||||||||||||||
Sbjct 2018 AACAAAACAGTAAATTGGAGGTGTGA 2043
> AT4G28630.1 | Symbols: ATM1, ATATM1 | ABC transporter of the
mitochondrion 1 | chr4:14138359-14140958 REVERSE LENGTH=2276
Length=2276
Score = 1125 bits (609), Expect = 0.0
Identities = 980/1151 (85%), Gaps = 57/1151 (5%)
Strand=Plus/Plus
Query 82 CATCACAGTTTCTCCAGGCTCATCAAACGTAACTCAATTCTTGA-ATCTGCACCTATCAA 140
||||||||||||||||| | |||||||||| |||||||| || ||| || |||||||
Sbjct 133 CATCACAGTTTCTCCAGTTTTATCAAACGTAGCTCAATTC-AGAGATCACCAGCTATCAA 191
Query 141 TGCA-T-ATAACTCTAATCCATCTCCGA--T-CA-CTCCAATGGTCAACGCACGCGT-TA 193
|||| | | || | |||||||||| | | || |||| | ||||||||||| || |
Sbjct 192 TGCATTCTTCAC-C-GATCCATCTCC-ATCTCCATCTCC-A--GTCAACGCACGAGTCT- 244
Query 194 TGTTCTTCTCAACTTCAACTTCAGCTCCAAATCAAGATCAGACCACCTCTAAACCTGATA 253
| ||||||||||||||||||||| |||||||||||||||| | | | | | | |
Sbjct 245 TCTTCTTCTCAACTTCAACTTCAACTCCAAATCAAGATCA-A--A-C-C---A----A-A 291
Query 254 ATCAAATCAACACGACGTCGTCGGAGAAGATCCTCCGCATGATTTCAAGCTACCTATGGA 313
| | | | | | | || | ||||||||||||||| |||||||||||| |||||||
Sbjct 292 A-C--AGC-A-TC-A--TC-T--AAGAAGATCCTCCGCACGATTTCAAGCTATCTATGGA 340
Query 314 TGAAAGACAACCCAAAACTACGTTTCAGAGTCATCACTGCTTTAGCGTGTCTCGTGGGAG 373
|||||||||||||| |||| || |||||||||||| ||||||||||||||||| | ||||
Sbjct 341 TGAAAGACAACCCAGAACTCCGATTCAGAGTCATCGCTGCTTTAGCGTGTCTCATAGGAG 400
Query 374 CCAAGTTCTTGAATGTTCAAGTTCCTTTCCTCTTCAAAGTAGCTATAGATTGGCTCTCTT 433
| |||||||||||||||||||||||||||||||||||| || |||| |||| |||||||
Sbjct 401 CTAAGTTCTTGAATGTTCAAGTTCCTTTCCTCTTCAAATTATCTATCGATTTACTCTCTT 460
Query 434 CATCTTCAT-TT-----GT---TGATTCAAATCCTTTTCTAGTTGCTGCTTTCGCTACTC 484
||| ||||| || | |||||||||||||| |||| ||||||||||||||||||
Sbjct 461 CATATTCATCTTCAACAATCACTGATTCAAATCCTTATCTACTTGCTGCTTTCGCTACTC 520
Query 485 CTTCCTCTGTTCTCATTGGTTATGGCATTGCTCGATCTGGATCTTCCGCTTTTAACGAGC 544
|||| || ||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 521 CTTCTTCCGTTCTCATTGGCTATGGCATTGCTCGATCTGGATCTTCAGCTTTTAACGAGC 580
Query 545 TTCGTACTAG-TGTTTTCTCCAAAGTAGCTCTCCACACCATACGAACCATCTCTAGAAAA 603
|||||||| | |||||||||||||||| |||||| ||| |||||| | | ||| | |||
Sbjct 581 TTCGTACT-GCTGTTTTCTCCAAAGTATCTCTCCGCACAATACGATCTGTTTCTCGTAAA 639
Query 604 GTGCTCTCGCGTTTACACGATCTCGATCTTCGTTACCACTTGAATCGAGAAACAGGAGCT 663
|||||||||| |||||| ||||| |||||||||||||| |||||||||||||||||||||
Sbjct 640 GTGCTCTCGCATTTACATGATCTTGATCTTCGTTACCATTTGAATCGAGAAACAGGAGCT 699
Query 664 TTGAACAGAATCATTGATCGTGGTAGCCGCGCTATAAACACGATTCTCTCAGCTATGGTT 723
||||| ||||||||||| ||||| || ||||| || |||||||| ||||| |||||||||
Sbjct 700 TTGAATAGAATCATTGACCGTGGAAGTCGCGCGATTAACACGATCCTCTCTGCTATGGTT 759
Query 724 TTCAACATTGTTCCCACGATCTTGGAGATATCAATGGTCTCATTTACATTAGCATACAAA 783
||||| ||||||| |||||||||||||||||||||||| || || ||||||||||||
Sbjct 760 TTCAATGTTGTTCCAACGATCTTGGAGATATCAATGGTCACAGGTATATTAGCATACAAT 819
Query 784 TTCGGAGTTGTCTATGCATTGATTACTTGTCTTTCTGTTGGATCATATATAGCTTTCACA 843
|| ||| ||| | ||| ||||| |||| |||||| ||||||||||| ||||||||||||
Sbjct 820 TTTGGACCTGTTTTTGCTTTGATCACTTCTCTTTCCGTTGGATCATACATAGCTTTCACA 879
Query 844 TTGGCTT-TGACACAGTGGAGAATC-AAGATTAGAAAAGCTATGAATGAAGCCGAAAACG 901
|||| || ||||||||| |||| | ||| |||||||||||||||| |||| || || |
Sbjct 880 TTGG-TTGTGACACAGTATAGAA-CTAAGTTTAGAAAAGCTATGAACCAAGCTGATAATG 937
Query 902 ATGCTAGCACAAGAGCCATTGACTCTCTCATAAACTACGAGACTGTTAAGTATTTCAACA 961
|||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||| ||||
Sbjct 938 ATGCAAGCACAAGAGCTATTGATTCTCTTGTAAACTACGAGACTGTTAAGTATTTTAACA 997
Query 962 ACGAAGATTACGAAGCTCGAAAGTATGATCAGTTACAC-GAAAATTACGAAGATGCTGCA 1020
|||||||||||||||| ||||||| ||| | |||| | ||| | || ||||||||||||
Sbjct 998 ACGAAGATTACGAAGCGAGAAAGTACGATGATTTACTCGGAAGA-TATGAAGATGCTGCA 1056
Query 1021 TTGCAAAGTCGGAAAAGTTTTGCCTTGTTAAATTTTGGACAGAGTGTTATATTTAGCACA 1080
||||||| || ||| ||| |||| || ||| |||||||||||||| |||||||||| |||
Sbjct 1057 TTGCAAACTCAGAAGAGTCTTGCGTTTTTAGATTTTGGACAGAGTTTTATATTTAGTACA 1116
Query 1081 GCTTTGTCAACAGCAATGGTGTTGTGTTCTCAAGGGATTATGAATGGTCAGATGACAGTT 1140
|||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1117 GCTTTGTCAACATCAATGGTGTTGTGTTCTCAAGGGATTATGAATGGAGAGATGACAGTT 1176
Query 1141 GGTGATTTGGTGATGGTGAATGGTCTTCTCTTTCAATTGTCTCTTCCTCTTTATTTTCTC 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1177 GGTGATTTGGTGATGGTGAATGGTCTTCTCTTTCAATTGTCTCTTCCTCTTTACTTTCTC 1236
Query 1201 GGTGTTGTTTA 1211
|||| ||||||
Sbjct 1237 GGTGGTGTTTA 1247
Score = 1086 bits (588), Expect = 0.0
Identities = 736/808 (91%), Gaps = 8/808 (1%)
Strand=Plus/Plus
Query 1222 CTAGAGGAAAGATCCGATATCGGAGATAAAGATATAGACAGGAAGTTCCCTACTCTTGTT 1281
|||||||| ||||||||||| ||||||||||||| ||| | ||| | ||| ||||||||
Sbjct 1297 CTAGAGGAGAGATCCGATATTGGAGATAAAGATACAGAGACAAAGCTACCTCCTCTTGTT 1356
Query 1282 CTGAAAGGTGGAAGCATTAGTTTTGAGAATGTACACTTTAGTTATCTGCCGGAGAGAAAG 1341
|||| |||||||||||| ||||||||||||||||| |||||||||||||| |||||||||
Sbjct 1357 CTGAGAGGTGGAAGCATCAGTTTTGAGAATGTACATTTTAGTTATCTGCCAGAGAGAAAG 1416
Query 1342 ATTTTAGATGGGATTTCATTTGAGGTACCGGCGGGGAAAAGTGTGGCGATTGTTGGTAGT 1401
||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 1417 ATTTTGGATGGGATTTCATTTGAGGTACCGGCAGGGAAAAGTGTAGCGATTGTTGGTAGT 1476
Query 1402 AGCGGGAGCGGAAAATCGACGATTCTTAGAATGATATTCAGATTCTTTGACACAGATTCC 1461
||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 1477 AGCGGAAGCGGCAAATCGACGATTCTTAGAATGATTTTCAGGTTCTTTGACACAGATTCT 1536
Query 1462 GGAAATGTAAAGATTGATGGTC-AGAATATAAAGGAAGTGA-GTTTGAAGAGTCTTCGAA 1519
|| ||||| | ||||||||||| || ||||||||||||||| | | ||||||||||||
Sbjct 1537 GGTAATGTTAGGATTGATGGTCAAG-ATATAAAGGAAGTGACACTAG-AGAGTCTTCGAA 1594
Query 1520 GCTCCATTGGAGTTGTCCCTCAAGATACTGTGCTCTTCAACGACACTATATTTCACAACA 1579
||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 1595 GCTGCATTGGAGTTGTCCCTCAAGATACTGTGCTCTTCAATGACACAATATTTCACAACA 1654
Query 1580 TTCACTATGGAAACCTTTCAACAACAGAGGAAGAGGTGTACGATGCAGCTCGGCGAGCAG 1639
|||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||
Sbjct 1655 TTCACTATGGAAACCTTTCAGCAACAGAAGAAGAGGTGTACGATGCAGCTAGGCGAGCAG 1714
Query 1640 CGATTCACGACATGATCATGAAATTCCCGGATAAATATTCAACCGCGGTGGGAGAAAGAG 1699
||||||||| | |||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 1715 TGATTCACGATACGATCATGAAATTTCCGGATAAATATTCGACCGCGGTGGGAGAAAGAG 1774
Query 1700 GGCTGATGCTGAGTGGTGGAGAGAAACAGAGAGTAGCACTTGCTCGTGCATTTCTAAAAT 1759
|||||||||||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||
Sbjct 1775 GGCTGATGCTGAGTGGTGGAGAAAAACAAAGAGTGGCACTTGCTCGTGCCTTTCTGAAAT 1834
Query 1760 CACCAGTGATTATGTTGTGTGACGAAGCGACTAGTGCGCTCGACAGTAAAACCGAGGCAG 1819
|||||| |||| | |||||||||||||| || | |||||| || ||||||||||||||||
Sbjct 1835 CACCAGCGATTCTCTTGTGTGACGAAGCAACGAATGCGCTTGATAGTAAAACCGAGGCAG 1894
Query 1820 AGATAATGAAATCGCTGAGGTCGCTAGCGAGTAACAGAA-ATTGCATTTTCATTGCACAT 1878
||||||||||| || | |||||||||||||||||||||| || |||||||||||||||||
Sbjct 1895 AGATAATGAAAACGTTCAGGTCGCTAGCGAGTAACAGAACAT-GCATTTTCATTGCACAT 1953
Query 1879 AGACTGACCACTGTAATGCAATGTGATGAGATTATAGTAATGGAGAAAGGGAAAGTGGTG 1938
|| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1954 AGGCTGACCACTGCGATGCAATGTGATGAGATAATAGTAATGGAGAAAGGGAAAGTGGTG 2013
Query 1939 GGAAAAGGGACACACCAAGTGCTGTTGG-GAAAATCTGGAAGATACGCCAAATTATGGAC 1997
| ||||||||||||||||||| |||||| |||| ||||| |||||||| |||||||||||
Sbjct 2014 GAAAAAGGGACACACCAAGTGTTGTTGGAGAAA-TCTGGCAGATACGCTAAATTATGGAC 2072
Query 1998 ACAACAAAACAGTAAATTGGAGGTGTGA 2025
|||||||||||||| | |||||||||||
Sbjct 2073 ACAACAAAACAGTACACTGGAGGTGTGA 2100
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 100350889455
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5