BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491934
Length=1389
Score E
Sequences producing significant alignments: (Bits) Value
AT4G28390.1 | Symbols: AAC3, ATAAC3 | ADP/ATP carrier 3 | chr4:... 2119 0.0
AT5G13490.1 | Symbols: AAC2 | ADP/ATP carrier 2 | chr5:4335467-... 645 0.0
> AT4G28390.1 | Symbols: AAC3, ATAAC3 | ADP/ATP carrier 3 | chr4:14041288-14043278
REVERSE LENGTH=1444
Length=1444
Score = 2119 bits (1147), Expect = 0.0
Identities = 1286/1351 (95%), Gaps = 17/1351 (1%)
Strand=Plus/Plus
Query 1 ATGTAGAACCCTACTCTTCTCGC-ATTTGTCCAGAG----CTCTCTCT-T-TCGTAAACG 53
|||||||| |||||||||||||| |||| |||| || |||||||| | |||| ||||
Sbjct 1 ATGTAGAAACCTACTCTTCTCGCAATTT-TCCACAGCTCTCTCTCTCTCTCTCGTTAACG 59
Query 54 CTCCGGCGAAAAATCTACGAATCAGCTTTTACTGAGTTT-TACTACAAAAATGGATGGAT 112
|| |||||||||||| |||| |||||||||||||| ||| ||| | ||||||||||||||
Sbjct 60 CTTCGGCGAAAAATCCACGAGTCAGCTTTTACTGA-TTTGTAC-A-AAAAATGGATGGAT 116
Query 113 CAAAGCATCCATCAGTGTTTCAGAAGCTACATGGACAATCTTACTTGATTAATAGACTTT 172
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 117 CAAAGCATCCATCAGTCTTTCAGAAGCTACATGGACAATCTTACTTGATCAATAGACTTT 176
Query 173 CTCCGATTGAGCAAACTCGTGATTACGGTGTCTCTGGTGCTTATGTCAATGGAGGTTTGC 232
|||||| || |||| |||||| |||| |||||||||||||||||||||||||||||||||
Sbjct 177 CTCCGAGTGTGCAAGCTCGTGGTTACTGTGTCTCTGGTGCTTATGTCAATGGAGGTTTGC 236
Query 233 AGAGTCTATTTCAGTCAACTAGCCATGGCATTGGCTCTTCTCTTATACCGCATCATGGTT 292
|||||||||| ||| |||||||||||||| ||||||| ||||||||| | | ||||||||
Sbjct 237 AGAGTCTATTGCAGCCAACTAGCCATGGCGTTGGCTCGTCTCTTATA-C-C-TCATGGTT 293
Query 293 CATTTCCTGTATTAGCTCAAGCTCCTAGTGAGAAAACTGGGACTGGTTTCTTGATCGATT 352
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 294 CATTTCCTGTATTAGCTCACGCTCCTAGTGAGAAAACTGGTACTGGTTTCTTGATCGATT 353
Query 353 TCCTTATGGGAGGAGTCTCAGCTGCTGTTTCGAAGACGGCAGCAGCGCCGATAGAGCGTG 412
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 354 TCCTTATGGGAGGAGTCTCAGCTGCTGTTTCGAAGACGGCAGCCGCGCCTATAGAGCGTG 413
Query 413 TTAAGCTCTTGATTCAGAATCAAGATGAAATGATCAAAGCTGGGCGTCTCTCTGAGCCAT 472
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 414 TGAAGCTCTTGATTCAGAATCAAGATGAAATGATCAAAGCTGGGCGTCTCTCTGAGCCAT 473
Query 473 ACAAAGGAATCAGTGATTGTTTTGGC-CGAACAGTCAAAGACGAAGGAATGATTGCTCTT 531
| ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||
Sbjct 474 ATAAAGGAATCAGTGATTGTTTT-GCTCGAACAGTCAAAGACGAAGGAATGCTTGCTCTT 532
Query 532 TGGAGAGGAAACACTGCCAATGTTATCAGATACTTCCCCACTCAGGCTTTAAACTTTGCT 591
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 533 TGGAGAGGAAACACTGCCAATGTTATCAGATACTTCCCCACTCAGGCTTTAAACTTTGCG 592
Query 592 TTCAAAGATTACTTTAAGAGGCTGTTTAACTTCAAGAAAGAAAAAGATGGCTACTGGAAG 651
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTCAAAGATTACTTCAAGAGGCTGTTTAACTTCAAGAAAGAAAAAGATGGCTACTGGAAG 652
Query 652 TGGTTTGCTGGGAACCTGGCGTCTGGTGGTGCAGCTGGTGCATCGTCTCTGCTTTTTGTG 711
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 653 TGGTTTGCAGGGAACCTGGCGTCTGGTGGTGCAGCTGGTGCATCATCTCTGCTTTTTGTG 712
Query 712 TACTCTTTGGATTACGCTCGTACCCGTTTGGCCAATGATGCGAAGGCGGCCAAGAAAGGT 771
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 713 TACTCTTTGGATTACGCTCGTACCCGTTTAGCCAATGATGCGAAGGCGGCCAAGAAAGGT 772
Query 772 GGTCAGAGGCAGTTTAATGGCATGGTCGACGTGTACAAGAAGACCATAGCCTCTGATGGC 831
|||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 773 GGTCAGCGGCAGTTTAATGGCATGGTCGACGTGTACAAGAAGACTATAGCCTCTGATGGC 832
Query 832 ATTGTCGGGCTTTACCGTGGTTTCAACATCTCATGTGTTGGAATTGTCGTGTATCGTGGG 891
||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||
Sbjct 833 ATTGTCGGGCTTTACCGTGGTTTCAACATCTCATGCGTTGGAATTGTCGTGTACCGGGGG 892
Query 892 CTTTACTTTGGATTGTATGATTCCTTGAAGCCTGTGGTTTTAGTTGATGGTCTCCAGGAT 951
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 893 CTTTACTTTGGATTGTATGATTCCTTGAAGCCTGTGGTTCTAGTTGATGGTCTCCAGGAT 952
Query 952 AGCTTCCTTGCGAGTTTCTTACTGGGATGGGGAATCACCATTGGAGCTGGACTGGCGTCT 1011
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 953 AGCTTCCTTGCTAGTTTCTTACTGGGATGGGGAATCACCATTGGAGCTGGATTGGCGTCT 1012
Query 1012 TACCCAATTGACACGGTGCGCAGAAGAATGATGATGACATCAGGTGAAGCAGTGAAGTAC 1071
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 1013 TACCCAATTGACACGGTTCGCAGAAGAATGATGATGACGTCAGGTGAAGCAGTGAAGTAC 1072
Query 1072 AAGAGCTCTCTTCAGGCCTTCTCTCAGATCGTCAAGAAAGAAGGGGCCAAGTCACTCTTC 1131
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1073 AAGAGCTCTCTTCAGGCCTTCTCTCAGATCGTCAAGAACGAAGGGGCCAAGTCACTCTTC 1132
Query 1132 AAGGGTGCAGGTGCCAACATCCTCCGTGCCGTTGCAGGCGCTGGTGTACTCGCCGGCTAT 1191
||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct 1133 AAGGGTGCAGGTGCCAACATCCTTCGTGCGGTTGCAGGCGCTGGTGTACTGGCCGGCTAT 1192
Query 1192 GACAAACTTCAGCTCATTGTGTTGGGCAAGAAGTATGGCTCTGGTGGTGGCTAAACTATG 1251
||||| || ||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 1193 GACAAGCTCCAGCTCATTGTGTTGGGTAAGAAGTATGGCTCTGGTGGTGGCTAAACGATG 1252
Query 1252 AGGATGATGAAAGAATAGCCCTTGAGGTCTGTGAATGAATAAAGCAGTGTGTCCGTTCGT 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1253 AGGATGATGAAAGAATAGCCCTTGAGGTCTGTGAATGAATAAAGCAGTGTGTCCGTTCGT 1312
Query 1312 ATAAATGTTGCTTTTAGAATATTGAGTGTCT 1342
|||||||||||||||||||||| ||||||||
Sbjct 1313 ATAAATGTTGCTTTTAGAATATAGAGTGTCT 1343
Score = 73.1 bits (39), Expect = 7e-12
Identities = 50/55 (91%), Gaps = 2/55 (4%)
Strand=Plus/Plus
Query 1336 AGTGTCT-TAGTTCTATGACGTTTCTTGACAAAAGAATAAATACAAAGAAAACCA 1389
||| ||| || ||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct 1369 AGT-TCTATACTTCTATGACTTTTGTTGACAAAAGAATAAATACAAAGAAAACCA 1422
> AT5G13490.1 | Symbols: AAC2 | ADP/ATP carrier 2 | chr5:4335467-4337628
FORWARD LENGTH=1516
Length=1516
Score = 645 bits (349), Expect = 0.0
Identities = 736/919 (80%), Gaps = 41/919 (4%)
Strand=Plus/Plus
Query 349 GATTTCCTTATGGGAGGAGTCTCAGCTGCTGTTTCGAAGACGGCAGCAGCGCCGATAGAG 408
|||||| | ||||| || || || |||||||| || ||||| || || || || || |||
Sbjct 368 GATTTCATGATGGGTGGTGTTTCTGCTGCTGTGTCAAAGACTGCTGCTGCTCCCATTGAG 427
Query 409 CGTGTTAAGCTCTTGATTCAGAATCAAGATGAAATGATCAAAGCTGGGCGTCTCT-CTGA 467
||||| ||||| |||||||| || || ||||| ||| | || ||||| | || | ||||
Sbjct 428 CGTGTCAAGCTTTTGATTCAAAACCAGGATGAGATGCTTAAGGCTGGAAGGCT-TACTGA 486
Query 468 GCCATACAAAGG-AATCAGTGATTGTTTTGGCCGAACAGTCAAAGACGAAGGAATGATT- 525
||||||||| || | || |||| ||||| ||| | ||| | | || ||||| | |||
Sbjct 487 GCCATACAAGGGTATTC-GTGACTGTTTCGGCAGGACAATTAGGGATGAAGG--T-ATTG 542
Query 526 GCTC-TT-TGGAGAGGAAACACTGCCAATGTTATCAGATACTTCCCCACTCAGGCTTTAA 583
| || || |||||||||||||| || ||||||||| | ||||||||||||||||| || |
Sbjct 543 GTTCGTTGTGGAGAGGAAACACCGCTAATGTTATCCGTTACTTCCCCACTCAGGCCTTGA 602
Query 584 ACTTTGCTTTCAAAGATTACTTTAAGAGGCTGTTT-AACTTCAAGAAAGAAAAAGATGGC 642
||||||| |||||||||||||| |||||||| ||| |||||||||||||| || ||||||
Sbjct 603 ACTTTGCATTCAAAGATTACTTCAAGAGGCT-TTTCAACTTCAAGAAAGACAAGGATGGC 661
Query 643 TACTGGAAGTGGTTTGCTGGGAACCTGGCGTCTGGTGGTGCAGCTGGTGCATCGTCTCTG 702
|||||||||||||||||||| ||| |||| ||||| ||||| |||||||| || || ||
Sbjct 662 TACTGGAAGTGGTTTGCTGGTAACTTGGCATCTGGAGGTGCTGCTGGTGCCTCTTCCCTT 721
Query 703 CTTTTTGTGTACTCT-TTGGATTACGCTCGTACCCGT-TTGGCCAATGA-TGCGAAGGCG 759
|| |||||||||||| || || || || ||||||||| || |||||||| | | ||| |
Sbjct 722 CTCTTTGTGTACTCTCTT-GACTATGCACGTACCCGTCTT-GCCAATGACT-CCAAGTCT 778
Query 760 GCCAAGAA---AGGTGGTCAGAGGCAGTTTAATGG-CATGGTCGACGTGTACAAGAAGAC 815
|||||||| ||| ||| | |||||||| ||||| | | || || || |||||||||||
Sbjct 779 GCCAAGAAGGGAGGAGGTGAAAGGCAGTTCAATGGTC-TTGTTGATGTCTACAAGAAGAC 837
Query 816 CAT--AGCCTCTGATGGCATTGTC-GGGCTTTACCGTGGTTTCAACATCTCATGTGTTGG 872
| | || || ||||| |||| | || ||||||||||||||||||||||| |||| |||
Sbjct 838 CCTCAAG--TCAGATGGTATTG-CTGGACTTTACCGTGGTTTCAACATCTCGTGTGCTGG 894
Query 873 AATTGTCGTGTATCGTGGGCTTTACTTTGGATTGTATGATTCCT-TGAAGCCTGTGGT-T 930
|| | || || ||||| || ||||||||| |||| || | || |||||||||| |
Sbjct 895 TATCATTGTCTACCGTGGTCTCTACTTTGGACTGTACGACT-CTGTGAAGCCTGTCCTCC 953
Query 931 TTAGTTGATGGTCTCCAGGATAGCTTCCTT-GCGAG-TTT-CTTACTGGGATGGGGAATC 987
| | | || | || ||||| || || ||| || || ||| | | || |||||| |||
Sbjct 954 TCACTGGA-GACCTGCAGGACAG-TTTCTTCGCTAGTTTTGC-T-CTTGGATGGCTCATC 1009
Query 988 ACCATTGGAGCTGGACTGGCGTCTTACCCAATTGACACGGTGCGCAGAAGAATGATGATG 1047
|||| ||| || || || ||||| ||||| ||||||||||| | |||||||||||||||
Sbjct 1010 ACCAATGGTGCGGGTCTTGCGTCGTACCCGATTGACACGGTTAGAAGAAGAATGATGATG 1069
Query 1048 ACATCAGGTGAAGCAGTGAAGTACAAGAGCTC-TCTTCAGGCCTTCTCTCAGATCGTCAA 1106
|||||||||||||| ||||||||||||||||| | || | || ||||| |||||||| ||
Sbjct 1070 ACATCAGGTGAAGCGGTGAAGTACAAGAGCTCAT-TTGATGCGTTCTCACAGATCGTGAA 1128
Query 1107 GAAAGAAGGGGCCAAGTCACTCTTCAAGGGTGCAGGTGCCAACATCCTCCGTGCCGTTGC 1166
||| ||||| |||||||| || ||||||||||| |||||||||||||| |||||||||||
Sbjct 1129 GAAGGAAGGAGCCAAGTCTCTGTTCAAGGGTGCGGGTGCCAACATCCTGCGTGCCGTTGC 1188
Query 1167 AGGCGCTGGTGTACTCGCCGGCTATGACAAACTTCAGCTCATTGTGTTGGGCAAGAAGTA 1226
||| |||||||| || || ||||| ||||| || ||| | || || || |||||||||||
Sbjct 1189 AGGTGCTGGTGTGCTTGCTGGCTACGACAAGCTGCAGTTAATCGTCTTCGGCAAGAAGTA 1248
Query 1227 TGGCTCTGGTGGTGGCTAA 1245
||| ||||| |||| ||||
Sbjct 1249 TGGATCTGGAGGTGCCTAA 1267
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 68423342835
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5