BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491983 Length=2181 Score E Sequences producing significant alignments: (Bits) Value AT4G28000.1 | Symbols: | P-loop containing nucleoside triphosp... 1685 0.0 AT5G52882.1 | Symbols: | P-loop containing nucleoside triphosp... 1016 0.0 > AT4G28000.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:13925456-13929280 FORWARD LENGTH=2493 Length=2493 Score = 1685 bits (912), Expect = 0.0 Identities = 984/1020 (96%), Gaps = 0/1020 (0%) Strand=Plus/Plus Query 1162 GAGGTGGCTCCTGATAATGAATTCGAGAAGCGCATAAGACCAGAGGTTATCCCAGCAAAT 1221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1474 GAGGTGGCTCCTGATAATGAATTCGAGAAGCGCATAAGACCAGAGGTTATCCCAGCAAAT 1533 Query 1222 GAGATTGGTGTGACTTTTGCTGATATAGGTTCACTGGATGAAACCAAAGAATCGCTTCAA 1281 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1534 GAGATTGGTGTGACTTTTGCTGATATAGGTTCACTGGATGAAACCAAAGAATCACTTCAA 1593 Query 1282 GAGCTTGTCATGCTTCCTCTACGTAGGCCTGACCTGTTCAAAGGTGGCCTTCTAAAGCCC 1341 |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct 1594 GAGCTTGTCATGCTTCCTCTTCGTAGGCCTGACCTGTTCAAAGGTGGTCTTCTAAAGCCC 1653 Query 1342 TGCAGAGGAATCCTCCTCTTTGGACCACCTGGTACTGGGAAAACTATGATGGCAAAAGCC 1401 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1654 TGCAGAGGAATCCTCCTCTTTGGACCACCTGGTACTGGAAAAACTATGATGGCAAAAGCC 1713 Query 1402 ATTGCGAACGAAGCTGGAGCTAGTTTTATAAACGTGTCAATGTCCACAATCACTTCAAAA 1461 ||||||||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||| Sbjct 1714 ATTGCGAACGAAGCTGGGGCTAGTTTCATAAATGTGTCGATGTCCACAATCACTTCAAAA 1773 Query 1462 TGGTTTGGAGAAGACGAGAAGAACGTGAGAGCTTTGTTCACCCTTGCGGCCAAAGTGTCT 1521 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1774 TGGTTTGGAGAAGATGAGAAGAACGTGAGAGCTTTGTTCACCCTCGCGGCCAAAGTGTCT 1833 Query 1522 CCGACTATTATATTTGTGGATGAAGTGGATAGCATGCTGGGACAGAGGACAAGAGTCGGA 1581 || ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct 1834 CCAACTATTATATTTGTGGATGAAGTGGATAGTATGCTGGGACAGAGGACAAGAGTTGGC 1893 Query 1582 GAGCATGAAGCTATGAGGAAGATCAAAAATGAGTTCATGACACATTGGGATGGGCTTATG 1641 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1894 GAGCATGAAGCTATGAGGAAGATCAAAAATGAGTTCATGACACACTGGGATGGGCTTATG 1953 Query 1642 TCGAATGCTGGTGACCGTATTCTCGTTCTTGCAGCAACAAACAGGCCTTTTGATCTCGAT 1701 || ||||| ||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct 1954 TCAAATGCGGGTGACCGTATTCTCGTTCTTGCAGCAACAAACAGACCATTTGATCTCGAT 2013 Query 1702 GAAGCCATCATCAGGAGGTTTGAGAGAAGAATCATGGTGGGTCTTCCATCGGTCGAGAGC 1761 ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 2014 GAAGCTATCATCAGGAGGTTTGAGCGAAGAATCATGGTGGGTCTTCCATCGGTCGAGAGC 2073 Query 1762 AGAGAGAAGATCTTAAGAACCTTATTGTCAAAAGAGAAAACAGAGAATCTTGATTTCCAT 1821 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2074 AGAGAGAAGATCTTGAGAACCTTATTGTCAAAAGAGAAAACAGAGAATCTTGATTTCCAA 2133 Query 1822 GAGCTTGCGCAGATGACAGATGGTTATAGTGGAAGTGATCTCAAGAACTTTTGCACAACA 1881 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2134 GAGCTTGCGCAGATGACAGATGGCTATAGTGGAAGTGATCTCAAGAACTTTTGCACAACA 2193 Query 1882 GCAGCATATCGACCAGTGAGGGAGCTGATAAAGCaagagtgcttgaaagaccaggagagg 1941 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2194 GCAGCATATCGACCAGTGAGGGAGCTGATAAAGCAAGAGTGCTTGAAAGACCAGGAGAGG 2253 Query 1942 aagaagaaagaggaagcaaagaagagtagtgaagagggatctgaaacaaaagaagaagTA 2001 | ||||| |||||||||| |||||| ||||||||| ||||||||| |||||||||||||| Sbjct 2254 AGGAAGAGAGAGGAAGCAGAGAAGAATAGTGAAGAAGGATCTGAAGCAAAAGAAGAAGTA 2313 Query 2002 CCTGCGGAGAGAGACATAACGTTGAGACCTTTGAGCATGGAAGACATGAAAGTAGCTAAA 2061 ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2314 TCTGAAGAGAGAGGCATAACGTTGAGACCTTTGAGCATGGAAGACATGAAAGTAGCTAAA 2373 Query 2062 AGCCAGGTTGCTGCTAGTTTTGCAGCAGAAGGAGCAGGAATGAACGAACTCAAGCAGTGG 2121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2374 AGCCAGGTTGCTGCTAGTTTTGCAGCAGAAGGAGCAGGAATGAACGAACTCAAGCAGTGG 2433 Query 2122 AATGATTTGTATGGAGAAGGAGGCTCCAGGAAGAAGGAACAGCTTTCTTACTTCCTTTAA 2181 |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct 2434 AATGATTTGTATGGAGAAGGAGGCTCCAGGAAAAAGGAACAGCTCTCTTACTTCCTTTAA 2493 Score = 1325 bits (717), Expect = 0.0 Identities = 767/791 (97%), Gaps = 4/791 (1%) Strand=Plus/Plus Query 374 GGACCTTGCGTAGGCACACAAGTGGCAACGATCTTCATTCAAGGGGCTTTGACGTTACAA 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 557 GGACCTTGCGTAGGCACACAAGTGGCAACGATCTTCATTCAAGGGGCTTTGACGTTACAA 616 Query 434 GTCATCCTCCGCGACTCAAGCGGAATGCTTCTGCTGCTTCTGATATGAGTAGCATATCAT 493 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 617 GTCAGCCTCCACGACTCAAGCGGAATGCTTCTGCTGCTTCTGATATGAGTAGCATATCAT 676 Query 494 CCCGTTCCGCAACTTCTGTTTCAGCTTCAAGCAAACGCAGTGCAAACTTATGCTTTGATG 553 ||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 677 CCCGTTCTGCAACTTCTGTTTCAGCTTCAAGCAAACGCAGTGCTAACTTGTGCTTTGATG 736 Query 554 AGAGACTTTTCCTTCAGTCACTTTACAAGGTCTTGGTTTCGATTTCAGAAACCAATCCTA 613 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 737 AGAGACTTTTCCTTCAGTCACTTTACAAGGTCTTGGTTTCGATTTCAGAAACCAATCCTA 796 Query 614 TAATCATATACCTGAGGGACGTTGAGAAGCTTTGTCAGTCAGAAAGGTTCTACAAGTTGT 673 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 797 TAATAATATACCTGAGGGATGTTGAGAAGCTTTGTCAGTCAGAAAGGTTCTACAAGTTGT 856 Query 674 TCCAGAGGCTCTTGACTAAGCTTTCTGGCCCTGTTTTGGTTCTTGGCTCAAGACTATTGG 733 |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct 857 TCCAGAGGCTCTTGACGAAGCTTTCTGGCCCTGTTTTGGTTCTCGGCTCAAGACTATTGG 916 Query 734 AACCCGAAGATGACTGTCAAGAAGTAGGAGAGGGCATTTCTGCTTTGTTTCCTTACAACA 793 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 917 AACCCGAAGATGACTGTCAAGAAGTAGGAGAGGGCATTTCTGCTTTGTTTCCTTACAACA 976 Query 794 TCGAGATCAGACCGCCAGAGGATGAAAATCAACTCATGAGCTGGAAAAC-ACGATTTGAA 852 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 977 TCGAGATCAGACCGCCAGAGGATGAAAATCAACTCATGAGCTGGAAAACGA-GATTTGAA 1035 Query 853 GATGACATGAAAGTGATACAGTTTCAGGACAACAAGAACCATATAGCAGAGGTTCTTGCG 912 |||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| ||| Sbjct 1036 GATGACATGAAAGTGATACAGTTTCAAGACAACAAGAACCACATAGCCGAGGTTCTAGCG 1095 Query 913 GCTAATGATCTTGAATGTGATGACTTAGGTTCCATATGCCATGCAGATACAATGTTCCTA 972 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1096 GCTAATGATCTTGAGTGTGATGACTTAGGTTCCATATGCCATGCAGATACAATGTTCCTA 1155 Query 973 AGCAGTCACATTGAGGAAATTGTGGTTTCTGCAATCTCCTACCATCTGATGCACAACAAA 1032 ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct 1156 AGCAGTCACATTGAGGAAATTGTTGTTTCTGCAATCTCCTACCATCTGATGAACAACAAA 1215 Query 1033 GAACCCGAATACAAAAACGGGAGGCTTGTAATATCTTCCACTAGCTTGTCCCATGGACTG 1092 |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 1216 GAACCCGAATACAAAAACGGGAGGCTTGTAATATCTTCTAATAGCTTGTCCCATGGACTG 1275 Query 1093 AGTATATTACAGGAAGGT-AACGGATGCTTTGAGGACTCCTTGAAGCTGGACACAAACAT 1151 | |||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 1276 AATATATTACAGGAAGGTCAA-GGATGCTTTGAGGACTCCTTGAAGCTGGACACAAACAT 1334 Query 1152 TGACTCCAAGG 1162 |||||||||| Sbjct 1335 CGACTCCAAGG 1345 Score = 569 bits (308), Expect = 3e-161 Identities = 328/338 (97%), Gaps = 0/338 (0%) Strand=Plus/Plus Query 1 ATGGAGCAGAAGAGCGTGTTGTTTTCCGCGTTAGGGGTTGGTGTTGGTTTAGGCATCGGT 60 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||| Sbjct 1 ATGGAGCAGAAGAGCGTGTTGTTTTCCGCGTTAGGGGTTGGTGTTGGGTTAGGGATTGGT 60 Query 61 CTAGCTTCGGGTCAGAGTTTGGGTAAATGGGCAAACGGGTCTATTTCTGCGGAGGATGGA 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CTAGCGTCGGGTCAGAGTTTGGGTAAATGGGCAAACGGGTCTATTTCTGCGGAGGATGGA 120 Query 121 CTTACCGGAGAGAAGATTGAGCAAGAGTTGGTTAGGCAGATTGTTGATGGCAGAGAGAGT 180 || |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 121 CTAACCGGAGAAAAGATTGAGCAAGAGTTGGTTAGGCAGATCGTTGATGGCAGAGAGAGT 180 Query 181 AGTGTCACTTTCGACGAGTTTCCTTATTACCTAAGTGAGAAAACTCGGCTTTTATTGACG 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 AGTGTCACTTTCGACGAGTTTCCTTATTACCTAAGTGAGAAAACTCGGCTTTTATTGACA 240 Query 241 AGTGCAGCTTATGTTCACCTAAAGCAATTTGATATCTCGAAGCACACGCGTAATCTTGCA 300 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 241 AGTGCAGCTTATGTTCACCTAAAGCAATCTGATATCTCGAAGCACACGCGTAATCTTGCA 300 Query 301 CCGGGAAGTAAGGCCATTCTTCTGTCTGGACCTGCTGA 338 || ||||||||||||||||||||||||||||||||||| Sbjct 301 CCTGGAAGTAAGGCCATTCTTCTGTCTGGACCTGCTGA 338 > AT5G52882.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:21433879-21438659 REVERSE LENGTH=3063 Length=3063 Score = 1016 bits (550), Expect = 0.0 Identities = 872/1028 (85%), Gaps = 20/1028 (2%) Strand=Plus/Plus Query 1162 GAGGTGGCTCCTGATAATGAATTCGAGAAGCGCATAAGACCAGAGGTTATCCCAGCAAAT 1221 ||||| | |||||||||||| || |||||||| ||||||||||| ||||| ||||||||| Sbjct 1768 GAGGTTGTTCCTGATAATGAGTTTGAGAAGCGTATAAGACCAGAAGTTATACCAGCAAAT 1827 Query 1222 GAGATTGGTGTGACTTTTGCTGATATAGGTTCACTGGATGAAACCAAAGAATCGCTTCAA 1281 |||||||||||||| ||||| ||||| ||||| || || ||||| ||||| ||||||||| Sbjct 1828 GAGATTGGTGTGACATTTGCAGATATTGGTTCTCTAGACGAAACAAAAGATTCGCTTCAA 1887 Query 1282 GAGCTTGTCATGCTTCCTC-TACGTAGGCCTGA-CCTGTTCAAAGGTGGCCTTCTAAAGC 1339 || ||||| |||||||| | || | || || || | | ||| |||| || ||||| |||| Sbjct 1888 GAACTTGTAATGCTTCCACTTA-GAAGACCGGATCTTTTTC-AAGGCGGTCTTCTCAAGC 1945 Query 1340 CCTGCAGAGGAATCCTCCTCTTTGGACCACCTGGTACTGGGAAAACTATGATGGCAAAAG 1399 | || ||||||||||| | || || |||||||||||||| ||||| ||| | ||||||| Sbjct 1946 CATGTAGAGGAATCCTATTATTCGGTCCACCTGGTACTGGCAAAACAATGCTTGCAAAAG 2005 Query 1400 CCATTGCGAACGAAGCTGGAGCTAGTTTTATAAACGTGTCAATGTCCACAATCACTTCAA 1459 | ||||| || ||||||||||||||||| || || || || ||||| ||||||||||||| Sbjct 2006 CAATTGCAAATGAAGCTGGAGCTAGTTTCATCAATGTCTCCATGTCTACAATCACTTCAA 2065 Query 1460 AATGGTTTGGAGAAGACGAGAAGAACGTGAGAGCTTTGTTCACCCTT-GCGGCCAAAGTG 1518 ||||||||||||||||||| ||||| ||||||||| |||| | | || || || ||||| Sbjct 2066 AATGGTTTGGAGAAGACGAAAAGAATGTGAGAGCTCTGTTTA-CTTTAGCAGCTAAAGTA 2124 Query 1519 TCTCCGACTATTATATTTGTGGATGAAGTGGATAGCATGCTGGGACAGAGGACAAGAGTC 1578 ||||| || |||||||||||||||||||| ||||| ||| ||||||| ||||||||||| Sbjct 2125 TCTCCAACGATTATATTTGTGGATGAAGTTGATAGTATGTTGGGACAAAGGACAAGAGTT 2184 Query 1579 GGAGAGCATGAAGCTATGAGGAAGATCAAAAATGAGTTCATGACACATTGGGATGGGCTT 1638 |||||||||||||||||||||||||| || |||||||| |||||||||||||||||||| Sbjct 2185 GGAGAGCATGAAGCTATGAGGAAGATTAAGAATGAGTTTATGACACATTGGGATGGGCTA 2244 Query 1639 ATGTCGAATGCTGGTGACCGTATTCTCGTTCTTGCAGCAACAAACAGGCCTTTTGATCTC 1698 ||| |||| | ||||| | ||||||||||||||||| |||||||| || |||||||| Sbjct 2245 ATGACGAAACCCGGTGAAAGGATTCTCGTTCTTGCAGCGACAAACAGACCGTTTGATCTT 2304 Query 1699 GATGAAGCCATCATCAGGAGGTTTGAGAGAAGAATCATGGTGGGTCTTCCATCGGTCGAG 1758 |||||||| ||||| |||||||||||||||||||| |||||||| ||||| ||| | ||| Sbjct 2305 GATGAAGCTATCATTAGGAGGTTTGAGAGAAGAATAATGGTGGGACTTCCTTCGATTGAG 2364 Query 1759 AGCAGAGAGAAGATCTTAAGAACCTTATTGTCAAAAGAGAAAACAGAGAATCTTGATTTC 1818 ||||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||||| Sbjct 2365 AGCAGAGAGAAGATCTTGAGAACTTTGTTGTCGAAAGAGAAAACAGAGAATCTTGATTTC 2424 Query 1819 CATGAGCTTGCGCAGATGACAGATGGTTATAGTGGAAGTGATCTCAAGAACTTTTGCA-C 1877 |||||||||| |||||| ||||| || || ||||||||||||||||||||||| |||| | Sbjct 2425 CATGAGCTTGGGCAGATAACAGAAGGCTACAGTGGAAGTGATCTCAAGAACTTATGCATC 2484 Query 1878 AACAGCAGCATATCGACCAGTGAGGGAGCTGATAAAGCaagagtgcttgaaagaccagga 1937 | |||| || ||| ||||||| || |||||||| |||| || | |||||||| ||||| Sbjct 2485 A-CAGCTGCTTATAGACCAGTTAGAGAGCTGATTCAGCAGGAAAGATTGAAAGATCAGGA 2543 Query 1938 gaggaagaagaaagaggaagcaaagaagagt-agtgaagagggatctgaaacaa-aagaa 1995 ||||||||||| ||| |||||| ||| || | ||||| ||| ||| || ||||| Sbjct 2544 GAGGAAGAAGAGAGAAGAAGCAG-GAAAAGGCACAGAAGA---ATCA-AAAGAAGAAGAA 2598 Query 1996 gaagTA-C--CTGCGGAGAGAGACATAACGTTGAGACCTTTGAGCATGGAAGACATGA-A 2051 | || | | ||| ||| |||| || || ||||||||||||| |||||||||||||| | Sbjct 2599 GCAGAAGCTTCTGAGGAAAGAGTTATTACATTGAGACCTTTGAACATGGAAGACATGAGA 2658 Query 2052 AGTAGCTAAAAGCCAGGTTGCTGCTAGTTTTGCAGCAGAAGGAGCAGGAATGAACGAACT 2111 | |||||||| |||||| ||||| ||||||||| ||||||||||||||||||| || || Sbjct 2659 AA-AGCTAAAACCCAGGTAGCTGCGAGTTTTGCATCAGAAGGAGCAGGAATGAATGAGCT 2717 Query 2112 CAAGCAGTGGAATGATTTGTATGGAGAAGGAGGCTCCAGGAAGAAGGAACAGCTTTCTTA 2171 ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| |||| Sbjct 2718 AAAGCAATGGAATGATTTGTATGGAGAAGGAGGCTCAAGGAAAAAGGAACAGCTCACTTA 2777 Query 2172 CTTCCTTT 2179 |||||||| Sbjct 2778 CTTCCTTT 2785 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 108182174475 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5