BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491996 Length=1007 Score E Sequences producing significant alignments: (Bits) Value AT4G27890.1 | Symbols: | HSP20-like chaperones superfamily pro... 1251 0.0 AT5G53400.1 | Symbols: BOB1 | HSP20-like chaperones superfamily... 462 2e-129 > AT4G27890.1 | Symbols: | HSP20-like chaperones superfamily protein | chr4:13886033-13888276 FORWARD LENGTH=1077 Length=1077 Score = 1251 bits (677), Expect = 0.0 Identities = 839/913 (92%), Gaps = 27/913 (3%) Strand=Plus/Plus Query 1 ATGGCGATTATCTCTGAGATGGAGGAGGCGAGACCCTCGATGGTGCCGTTT-AGTGCAAG 59 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||| Sbjct 1 ATGGCGATTATCTCTGAGATGGAGGAGGCGAGACCCTCGATGGTGCC-TTTCACCGCAAG 59 Query 60 TTTCGATCCTTCAAACCCAATAGGGTTTTTGGAGAAAGTCCTTGACGTTATCGGGAAAGA 119 ||| ||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||| Sbjct 60 TTTTGATCCTTCAAACCCAATAGCGTTTTTGGAGAAAGTTCTTGATGTTATCGGGAAAGA 119 Query 120 GAGCAACTTTCTGAGGAAAGAAACGGCTGAGAAGGAGATCGTGGCTGCTGTTAGGGCTGC 179 |||||| ||||||| |||||| ||||||||||||||||||||||||||||||| |||||| Sbjct 120 GAGCAATTTTCTGAAGAAAGACACGGCTGAGAAGGAGATCGTGGCTGCTGTTATGGCTGC 179 Query 180 AAAAG-AGAGGTTGAGGGAAGCCGAGAAGAAGAAGTTGGAGAAGGAGAATGTTAAGCCGA 238 ||| |||||||||||||||| ||||||||||||||||||||||||| |||| | Sbjct 180 -GAAGCAGAGGTTGAGGGAAGCGGAGAAGAAGAAGTTGGAGAAGGAGAGTGTT------A 232 Query 239 CGGAGCCCATGGAGGTTGAGAAGGCAAAGAAGGATAGCTTGAAGGCCAC---G--GG-G- 291 || ||||||||||||||||| ||||||| |||||||||||| |||| | || | Sbjct 233 ---AGTCCATGGAGGTTGAGAAGCCAAAGAAAGATAGCTTGAAGCCCACGGAGCTGGAGA 289 Query 292 -GCC-ATGGAGGTG-G--AGAAGGCGACGGATCCCATGGAGGTTGAGAAGCCCAAGGAGG 346 ||| | ||||| | | || |||||| |||||||||||| |||||||||| || |||| Sbjct 290 AGCCGAAGGAGGAGAGCTTGATGGCGACTGATCCCATGGAGATTGAGAAGCCTAAAGAGG 349 Query 347 AAAAAGAATCTGGTCCCATCGTTCCTAACAAAGGCAATGGGCTTGATTTTGAGAAATACT 406 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 350 AGAAAGAATCGGGTCCCATCGTTCCTAACAAAGGCAATGGGCTTGATTTTGAGAAATACT 409 Query 407 CATGGGGACAGAATCTTCAAGAGGTCACAATTAACATTCCAGTGCCAGAAGGCACTAAAT 466 |||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||| Sbjct 410 CATGGGGACAGAATCTCCAAGAGGTCACAATTAACATTCCAATGCCGGAAGGCACTAAAT 469 Query 467 CAAGATCTGTTACCTGTGAAATCAAGAAGAACCGTCTGAAAGTTGGTCTCAAAGGGCAAG 526 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 470 CAAGGTCTGTTACCTGTGAAATCAAGAAGAACCGTCTCAAAGTTGGTCTCAAAGGGCAAG 529 Query 527 ATCTAATCATCGATGGAGAATTCTTCACTTCTGTCAAGCCTGACGACTGCTTCTGGAATA 586 | |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 530 ACCTAATCGTCGATGGAGAATTCTTCAATTCTGTCAAGCCTGACGACTGCTTCTGGAATA 589 Query 587 TCGAGGATCAAAAGATGATATCAGTGCTCTTGACAAAGCAAGACCAGATGGAGTGGTGGA 646 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 590 TCGAGGATCAAAAGATGATATCGGTGCTCTTGACAAAGCAAGACCAGATGGAGTGGTGGA 649 Query 647 AATATTGTGTGAAGGGAGAACCTGAAATAGACACTCAGAAAGTTGAACCAGAGAGCAGCA 706 | ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct 650 AGTATTGTGTGAAGGGAGAACCTGAGATAGACACTCAGAAAGTTGAACCAGAGACCAGCA 709 Query 707 AA-TTGGGTGATCTCGACCCTGAAACTCGCGCATCCGTTGAGAAGATGATGTTTGATCAA 765 || || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 710 AACTT-GGTGATCTCGACCCTGAAACTCGCGCATCCGTTGAGAAGATGATGTTTGATCAA 768 Query 766 AGGCAAAAGCAGATGGGACTCCCAACAAGTGATGAGATAGAGAAGAAAGATATGCTCAAG 825 ||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 769 AGGCAGAAGCAGATGGGACTACCAAGGAGTGATGAGATAGAGAAGAAAGATATGCTCAAG 828 Query 826 AAGTTCATGGCTCAGAATCCTGGGATGGACTTCTCTAACGCAATGTTTAAATGATGATCT 885 |||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||| Sbjct 829 AAGTTCATGGCTCAGAATCCTGGGATGGACTTCTCTAATGCAAAGTTTAACTGATGATCT 888 Query 886 TTATTCAACTCTT 898 |||| |||||||| Sbjct 889 TTATCCAACTCTT 901 > AT5G53400.1 | Symbols: BOB1 | HSP20-like chaperones superfamily protein | chr5:21661445-21663572 FORWARD LENGTH=1247 Length=1247 Score = 462 bits (250), Expect = 2e-129 Identities = 454/551 (82%), Gaps = 20/551 (4%) Strand=Plus/Plus Query 341 AGGAGGAA-AAAGAATCTGGTCCCATCGTTCCTAACAAAGGCAATGG-GCTTGATTTTGA 398 |||| ||| || |||||||||||||| |||||||||||||| ||||| | |||| |||| Sbjct 520 AGGA-GAAGAAGGAATCTGGTCCCATTGTTCCTAACAAAGGTAATGGAAC-TGATCTTGA 577 Query 399 GAAATACTCATGGGGACAGAATCTTCAAGAGGTCACAATTAACATTCCAGTGCCAGA-AG 457 ||| ||||||||| |||||||| || ||||| ||| |||||||||||||||| | | Sbjct 578 GAACTACTCATGGATCCAGAATCTCCAGGAGGTTACAGTTAACATTCCAGTGCC-TACTG 636 Query 458 GCACTAAATCA-AGATCTGTTACCTGTGAAATCAAGAAGAACCGTCTGAAAGTTGGTCTC 516 | |||||| || || ||||| ||||| || ||||| |||||||| || ||||||||| Sbjct 637 GGACTAAAGCACGGA-CTGTTGTATGTGAGATTAAGAAAAACCGTCTCAAGGTTGGTCTC 695 Query 517 AAAGGGCAAGATCTAATCATCGATGGAGAATTCTTCAC-TTCTGTCAAGCCTGACGACTG 575 ||||| || |||| |||| ||||||| || ||| | | ||||| |||||||| ||||| Sbjct 696 AAAGGCCAGGATCCAATCGTCGATGGGGAGCTCTAC-CGATCTGTGAAGCCTGATGACTG 754 Query 576 CTTCTGGAATATCGAGGATCAAAAGATGATATCAG-TGCTCTTGACAAAG-CAAGACCAG 633 || |||||||||||||||||||||| |||| || | | |||||||| ||| | || ||| Sbjct 755 CTACTGGAATATCGAGGATCAAAAGGTGATTTC-GATTCTCTTGACTAAGTC-TGATCAG 812 Query 634 ATGGAGTGGTGGAAATATTGTGTGAAGGGAGAACCTGAAATAGACACTCAGAAAGTTGAA 693 |||||||||||||||| |||||||| || ||||||||||| || ||||||||||||||| Sbjct 813 ATGGAGTGGTGGAAATGCTGTGTGAAAGGTGAACCTGAAATCGATACTCAGAAAGTTGAA 872 Query 694 CCAGAGAGC-AGCAAATTGGGTGATCTCGACCCTGAAACTCGCGC-ATCCGTTGAGAAGA 751 ||||||| | || ||||| ||||| || || || ||||||||| | | | |||||||| | Sbjct 873 CCAGAGA-CTAGTAAATTAGGTGACCTTGATCCAGAAACTCGCTCGA-CTGTTGAGAAAA 930 Query 752 TGATGTTTGATCAAAGGCAAAAGCAGATGGGACTCCCAACAAGTGATGAGATAGAGAAGA 811 ||||||||||||||||||||||||||||||| || |||||||| || ||| || ||||| Sbjct 931 TGATGTTTGATCAAAGGCAAAAGCAGATGGGTCTTCCAACAAGCGAGGAGCTACAGAAGC 990 Query 812 AAGATATGCTCAAGAAGTTCATGGCTCAGAATCCTGG-GATGGACTTCTCTAACGCAATG 870 |||| || || ||||| |||||| || || |||| || |||||||||||| || |||| | Sbjct 991 AAGAGATCCTTAAGAAATTCATGTCTGAGCATCC-GGAGATGGACTTCTCAAATGCAAAG 1049 Query 871 TTTAAATGATG 881 ||||| ||||| Sbjct 1050 TTTAACTGATG 1060 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 49329932354 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5