BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492011
Length=2466
Score E
Sequences producing significant alignments: (Bits) Value
AT4G27730.1 | Symbols: ATOPT6, OPT6 | oligopeptide transporter ... 3862 0.0
AT5G53510.1 | Symbols: ATOPT9, OPT9 | oligopeptide transporter ... 1483 0.0
> AT4G27730.1 | Symbols: ATOPT6, OPT6 | oligopeptide transporter
1 | chr4:13833807-13836578 REVERSE LENGTH=2538
Length=2538
Score = 3862 bits (2091), Expect = 0.0
Identities = 2315/2425 (95%), Gaps = 7/2425 (0%)
Strand=Plus/Plus
Query 48 CACTTTTCAAAAACGATGGGAGAGATAGCAACAGAGTTCACGGCGGTTAT-G--GATGAT 104
|||| ||| ||||||||||||||||||||||||||||||||| ||||||| | ||||||
Sbjct 96 CACTCTTCTAAAACGATGGGAGAGATAGCAACAGAGTTCACGCCGGTTATGGATGATGAT 155
Query 105 GATGACCGGTGCGTTGTACCGGAGGTAGAGCTCACTGTACCCAAAACCGACGATTCATCT 164
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct 156 GATGACCGGTGCGTTGTACCGGAGGTAGAGCTCACTGTACCCAAGACCGACGATTCAACT 215
Query 165 TTACCGGTTCTCACATTCCGGATGTGGGTTCTTGGTATAGGCGCGTGCATTGTACTCT-C 223
||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 216 TTACCGGTTTTAACATTTCGGATGTGGGTTCTTGGTATAGGCGCGTGCATTGTACTCTCC 275
Query 224 TTTCATCAACCAGTTTTTCTGGTACAGAACGATGCCGTTGAGTGTCACCGGAATCTGCGC 283
||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct 276 TTT-ATCAACCAGTTTTTCTGGTACAGAACGATGCCGTTGAGTATCACCGGAATCTCCGC 334
Query 284 TCAGATCGCCGTCGTGCCGATTGGACATCTCATGGCGAGGGTGCTTCCGACAAGGAGATT 343
||||||||||||||||||| |||| |||||||||||||| ||||||||||||| |||||
Sbjct 335 TCAGATCGCCGTCGTGCCGCTTGGTCATCTCATGGCGAGAGTGCTTCCGACAAAAAGATT 394
Query 344 CTTGGAAGGTACGAGGTTTCAGTTCACCTTAAACCCAGGTGCCTTCAACGTCAAGGAACA 403
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 395 CTTGGAAGGTACGAGGTTTCAGTTTACCTTAAACCCGGGTGCCTTCAACGTCAAGGAACA 454
Query 404 TGTTCTGATAACCATCTTTGCAAATTCCGGCGCCGGCTCCGTTTACGCTACTCATATACT 463
|||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 455 TGTTCTGATAACTATCTTTGCAAATTCCGGCGCCGGCTCTGTTTACGCTACTCACATACT 514
Query 464 TAGTGCTATTAAGCTTTACTATAAACGTCCTCTTCCTTTCCTCCCAGCGTTTCTCGTCAT 523
||||||||||||||||||||| |||||| |||||||||||||||| || |||||||||||
Sbjct 515 TAGTGCTATTAAGCTTTACTACAAACGTTCTCTTCCTTTCCTCCCTGCATTTCTCGTCAT 574
Query 524 GATCACCACTCAGATTCTTGGATTTGGTTGGGCTGGTCTCTTTAGGAAACACCTTGTTGA 583
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 575 GATCACCACTCAGATTCTTGGATTTGGTTGGGCTGGTCTCTTCAGGAAACACCTTGTTGA 634
Query 584 GCCTGGTGAAATGTGGTGGCCAAGCAATCTTGTTCAAGTCTCTCTCTTTGGTGCCTTGCA 643
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 635 GCCTGGTGAAATGTGGTGGCCAAGCAATCTTGTTCAAGTCTCTCTCTTTGGTGCGTTACA 694
Query 644 CGAGAAAGAAAAGAAATCTAGAGGAGGCATGAGTCGAACACAATTCTTCTTAATCGTCCT 703
|||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||
Sbjct 695 CGAGAAAGAAAAGAAATCAAGAGGAGGCATGAGTAGAACTCAATTCTTCTTAATCGTCCT 754
Query 704 CGTAGCTAGCTTTGCTTACTACATCTTTCCTGGTTATCTATTCACCATGTTAACATCAAT 763
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 755 CGTAGCTAGCTTTGCTTACTACATCTTTCCTGGTTATCTTTTCACCATGTTAACATCAAT 814
Query 764 CTCATGGGTTTGCTGGCTTAATCCCAAATCAATTCTGGTAAACCAACTCGGTTCAGGTGA 823
||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTCATGGGTCTGTTGGCTCAATCCCAAATCAATTCTGGTAAACCAACTCGGTTCAGGTGA 874
Query 824 ACATGGTCTTGGTATTGGTTCCATTGGTTTTGATTGGGTCACCATTAGTGCTTATCTTGG 883
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 875 ACATGGTCTTGGCATTGGTTCCATTGGTTTTGATTGGGTCACTATTAGTGCTTATCTTGG 934
Query 884 AAGCCCTTTAGCTAGTCCATTGTTCGCTTCCGTCAATGTAGCCATCGGTTTCGTGCTGGT 943
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 935 AAGCCCTTTAGCTAGTCCTTTGTTCGCTTCCGTCAATGTAGCCATTGGTTTCGTGCTGGT 994
Query 944 TATGTATATTGTCACGCCTGTTTGTTACTGGCTTAACATTTATGACGCCAAGACCTTCCC 1003
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 995 TATGTATATCGTCACGCCTGTTTGTTACTGGCTTAACATTTATGATGCCAAGACCTTCCC 1054
Query 1004 TATCTTCTCTAGCCAGCTCTTCATGGGTAATGGCTCACGTTATGATGTGTTGAGCATTAT 1063
|||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 1055 TATCTTCTCTAGTCAGCTCTTCATGGGGAATGGCTCACGTTATGATGTTTTGAGCATTAT 1114
Query 1064 TGATAGCAAGTTCCATCTTGACCGGGCGGTTTACTCTAGGACCGGCTCCATTAACATGAG 1123
||||||||| |||||||||||||| | |||||||||||||||||| ||||| || |||||
Sbjct 1115 TGATAGCAAATTCCATCTTGACCGTGTGGTTTACTCTAGGACCGGGTCCATCAATATGAG 1174
Query 1124 CACCTTCTTTGCTGTTACTTATGGTCTCGGGTTTGCTACGTTGTCTGCCACCATTGTCCA 1183
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1175 CACCTTCTTTGCTGTTACTTATGGTCTCGGGTTTGCTACATTGTCTGCCACCATTGTCCA 1234
Query 1184 TGTCTTAGTCTTCAACGGAAGTGACTTGTGGAAACAGACAAGAGGGGCCTTTAAAAAGGA 1243
||| ||||||||||||||||||||||||||||| |||||||||||||| ||| | ||| |
Sbjct 1235 TGTTTTAGTCTTCAACGGAAGTGACTTGTGGAAGCAGACAAGAGGGGCGTTTCAGAAGAA 1294
Query 1244 TAAGAAAATGGATATACACACAAGAATCATGAAGAAAAACTACAGGGAAGTTCCATTGTG 1303
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1295 TAAGAAAATGGATATACACACGAGAATCATGAAGAAAAACTACAGGGAAGTTCCATTGTG 1354
Query 1304 GTGGTTTTTGGTCATCCTTTTACTGAATATCGCGCTCATCATGTTCATCTCCGTGCACTA 1363
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1355 GTGGTTTTTGGTAATCCTTTTACTGAATATCGCGCTTATCATGTTCATCTCCGTGCACTA 1414
Query 1364 CAACGCGACCGTGCAGCTTCCTTGGTGGGGAGTGTTACTTGCTTGTGCCATTGCCATCTC 1423
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1415 CAACGCTACTGTGCAGCTTCCTTGGTGGGGAGTGTTACTTGCTTGTGCCATTGCCATCAG 1474
Query 1424 TTTCACTCCTTTGATCGGTGTCATAGCTGCTACCACTAATCAGGCACCGGGTTTGAACAT 1483
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||
Sbjct 1475 TTTCACTCCTTTGATCGGTGTCATAGCTGCCACCACTAATCAGGCACCGGGATTGAATAT 1534
Query 1484 CATAACCGAGTATGTTATCGGGTATATATACCCGGAACGTCCTGTTGCCAACATGTGTTT 1543
|||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 1535 CATAACAGAGTATGTTATCGGGTATATCTACCCGGAACGTCCTGTTGCAAACATGTGTTT 1594
Query 1544 CAAGGTCTATGGATACATTAGTATGACTCAAGCGCTAACTTTCATTTCCGATTTCAAGCT 1603
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1595 CAAGGTCTATGGATACATTAGTATGACTCAAGCGCTAACTTTCATTTCCGACTTCAAGCT 1654
Query 1604 TGGTCATTACATGAAGATCCCGCCTAGATCCATGTTCATGGCTCAGGTGTTTGGGACTCT 1663
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 1655 TGGTCATTACATGAAGATCCCGCCTAGATCCATGTTCATGGCTCAGGTGGCTGGGACACT 1714
Query 1664 TGTGGCGGTTGTTGTTTACACAGGAACAGCTTGGTGGTTAATGGAAGAGATTCCTCATCT 1723
||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1715 TGTGGCGGTGGTTGTGTACACAGGAACAGCCTGGTGGTTAATGGAAGAGATTCCTCATCT 1774
Query 1724 CTGTGACACGGCCTTGCTTCCTTCAGACAGCCAATGGACTTGTCCCATGGACCGCGTTTT 1783
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1775 TTGTGATACATCCTTGCTTCCTTCAGACAGCCAATGGACTTGTCCCATGGACCGCGTTTT 1834
Query 1784 CTTTGACGCCTCTGTGATTTGGGGACTAGTGGGACCACGTAGGGTGTTTGGAGACCTTGG 1843
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1835 CTTTGACGCCTCTGTGATTTGGGGACTAGTGGGACCACGCAGGGTGTTTGGAGACCTTGG 1894
Query 1844 AGAATACTCAAATGTCAACTGGTTCTTCCTCGTCGGAGCCATAGCTCCACTCTTAGTTTG 1903
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1895 AGAATACTCAAATGTCAACTGGTTCTTCCTCGTTGGAGCCATAGCTCCACTCTTAGTTTG 1954
Query 1904 GCTAGCCACAAAGATGTTCCCGGCTCAGACATGGATCTCCAAGATTCATATCCCTGTTCT 1963
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||
Sbjct 1955 GCTAGCCACAAAGATGTTTCCGGCTCAGACATGGATCGCCAAGATTCATATCCCTGTCCT 2014
Query 1964 TGTGGGAGCCACCGCAATGATGCCACCAGCAACAGCAGTTAACTTCACCAGCTGGCTCAT 2023
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 2015 TGTGGGAGCCACCGCAATGATGCCACCAGCAACAGCAGTTAACTTCACTAGTTGGCTCAT 2074
Query 2024 CGTCGCATTCATCTTTGGCCACTTCATTTTCAAGTACAGGAGAGAGTGGTGGACGAAGTA 2083
||||||||||||||||||||||||||| ||||||||||| |||| ||||||||| |||||
Sbjct 2075 CGTCGCATTCATCTTTGGCCACTTCATCTTCAAGTACAGAAGAGTGTGGTGGACCAAGTA 2134
Query 2084 TAACTATGTGTTGTCTGGTGGTTTAGACGCTGGCTCAGCTTTTATGACCATACTTCTGTT 2143
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 2135 TAACTATGTGTTGTCTGGTGGTTTAGATGCTGGCTCTGCTTTTATGACCATACTTCTGTT 2194
Query 2144 TCTGGCACTCGGACGAAAAGGAATTGAAGTGCAGTGGTGGGGAAATTCCGGCGACCGAGA 2203
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2195 TCTAGCACTCGGACGAAAAGGAATTGAAGTGCAGTGGTGGGGAAATTCCGGCGACCGAGA 2254
Query 2204 TACATGTCCATTAGCTTCTTGTCCAACTGCTAAAGGTGTTGTCGTCAAAGGCTGTCCCGT 2263
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2255 TACATGTCCCTTAGCTTCTTGTCCAACTGCTAAAGGTGTTGTCGTCAAAGGCTGTCCCGT 2314
Query 2264 CTTCTAGCTAATGAGTCATGAGACAAAAGCATATACCAAGTGCTTTGTACAGAACACACA 2323
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2315 CTTCTAGCTCATGAGTCATGAGACAAAAGCATATACCAAGTGCTTTGTACAGAACACACA 2374
Query 2324 GCAAAATGATAATTGTAATTCTCGGAAATGTCTTTACTCTCCAAGAACTATATCTTT-GT 2382
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2375 GCAAACTGATAATTGTAATTCTCGGAAATGTCTTTACTCTCCAAGAACTATATCTTTTGT 2434
Query 2383 GATAGCTTTTAA-CTAGGTACTATCCTGTTCTATGACAGAACACAAATGCTAGTGATTCT 2441
||||||||| || ||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct 2435 GATAGCTTTAAAACTAGGTACTATCCTGTTCTTTGACTGAACACAAATGCTAGTGATTCT 2494
Query 2442 ATTTGTGTTTCCTTATAATGATTTT 2466
|| |||| ||||||| |||||||||
Sbjct 2495 ATATGTGGTTCCTTAAAATGATTTT 2519
> AT5G53510.1 | Symbols: ATOPT9, OPT9 | oligopeptide transporter
9 | chr5:21738849-21742082 FORWARD LENGTH=2226
Length=2226
Score = 1483 bits (803), Expect = 0.0
Identities = 1704/2133 (80%), Gaps = 85/2133 (4%)
Strand=Plus/Plus
Query 100 ATGATGA--T-GACCGGTGCGTTGTACCGGAGGTAGAGCTCACTGTACCCAAAACCGACG 156
||||||| | ||||||||||| || |||||| ||||| || || || |||||||| |
Sbjct 53 ATGATGATCTGGACCGGTGCGTGGTGGAGGAGGTTGAGCTAACCGTTCCAAAAACCGATG 112
Query 157 ATTCATCTTTACCGGTTCTCACATTCCGGATGTGG-GTTCTTGGTATAGGCGCGTGCATT 215
|| || | ||||||||||||||||| || |||||| || | ||| | || ||||| ||
Sbjct 113 ATCCAACGTTACCGGTTCTCACATTTCGAATGTGGACTT-TAGGTCTTGGTGCGTGTATC 171
Query 216 GTACTCTCTTTCATCAACCAGTTTTTCTGGTACAGAAC-GATGCCGTTGAGTGTCACCGG 274
||||||| ||||| |||||||||||||||||||| || ||||||||| | | | |||
Sbjct 172 ATACTCTCGTTCATAAACCAGTTTTTCTGGTACAG-ACAGATGCCGTTAACCATTAGCGG 230
Query 275 AATCTGC-GCTCAGATCGCCGTCGTGCCGA-TTGGACATCTCATGGCGAGGGTGCTTCCG 332
||||| | |||||||| || |||||||| | |||| || || ||||| | ||| |||||
Sbjct 231 AATCT-CGGCTCAGATTGCGGTCGTGCC-ACTTGGTCACCTGATGGCTAAGGTTCTTCCT 288
Query 333 ACAAGGA-GATTCTTGGAAGGTA-CGAGGTTTCAGTTCACCT-TAAACCCAGGTGCC-TT 388
||||||| | ||||||||||| | | | || |||| || | || |||||| || ||
Sbjct 289 ACAAGGATG-TTCTTGGAAGG-ATCAAAGTGGGAGTT-TTCTATGAATCCAGGT-CCTTT 344
Query 389 CAACGTCAAGGAACATGT-TCTGATAACCATCTTTGCAAATTCCGGCGCCGGCTCCGTTT 447
|| |||||||||||||| | |||| || || ||||| ||||| || || || | ||||
Sbjct 345 TAATGTCAAGGAACATGTAT-TGATCACGATTTTTGCTAATTCGGGAGCTGGAACGGTTT 403
Query 448 ACGCTACTCATATACTTAGTGCTATTAAGCTTTACTATAA-ACG-TCCTCTTCC-TTTCC 504
| || ||||||||||||||||| |||||||| || ||||| | | | ||||||| ||| |
Sbjct 404 ATGCGACTCATATACTTAGTGCAATTAAGCTCTATTATAAGA-GAT-CTCTTCCATTT-C 460
Query 505 TCCCAGCGTTTCTCGTCATGATCACCACTCAGATTCTTGGATTTGGTTGGGCTGGTCTCT 564
| || || |||||| | |||||||| || ||| |||| |||||||| ||||||||||| |
Sbjct 461 TACCGGCTTTTCTCCTTATGATCACAACGCAGTTTCTCGGATTTGGGTGGGCTGGTCTAT 520
Query 565 TTAGGAAACACCTTGTTGAGCCTGGTGAAATGTGGTGGCCAAGCAATCTTGTTCAAGTCT 624
| | ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 521 TCCGTAAACATCTTGTTGAGCCTGGTGAAATGTGGTGGCCAAGCAATCTAGTTCAAGTGT 580
Query 625 CTCTCTTTGGTGCCTTGCACGAGAAAGAAAAGAA-ATCTAGAGGAGGCATGAGTCGAA-C 682
||||||| |||||||||||||||| |||||||| | || |||||||||| |||| |
Sbjct 581 CTCTCTTCAGTGCCTTGCACGAGAAGGAAAAGAAGAAAAAG-GGAGGCATGACCCGAATC 639
Query 683 ACAATTCTTCTTAATCGTCCTCGT-AGCTAGCTTTGCTTACTACATCTTTCC-TGGTTAT 740
||||||||| | || ||||| || | | || ||||| |||||||| | ||| |||||||
Sbjct 640 -CAATTCTTCCTCATTGTCCTTGTTACC-AGTTTTGCATACTACAT-TCTCCCTGGTTAT 696
Query 741 CTATTCACCATGTTAACATCAATCTCATGGGTTTGCTGGCTTAATCCCAAATCAATTCTG 800
||||||| ||| |||| || ||||||||| | || |||||| ||||||||| || ||
Sbjct 697 TTATTCACAATGATAACTTCCATCTCATGGATCTGTTGGCTTGGTCCCAAATCGGTTTTG 756
Query 801 GTAAACCAACTCGGTTCAGGTGAACATGGTCTTGGTATTGGTTCCATTGGTTTTGATTGG 860
|| |||||||||||||||||||||| |||||||||||||| | |||||| |||| |||
Sbjct 757 GTTCACCAACTCGGTTCAGGTGAACAAGGTCTTGGTATTGGCGCAATTGGTATTGACTGG 816
Query 861 G-TCACCATTAG-TGCTTATCTTGGAAGCCCTTTAGCTAGTCCATTGTTCGCTTCCGTCA 918
| | || ||||| | |||| || || ||||| | || ||||| || |||||| | |||
Sbjct 817 GCT-ACAATTAGCT-CTTACCTCGGTAGCCCACTCGCGAGTCCCTTATTCGCTACAATCA 874
Query 919 ATGTAGCCATCGGTTTCGTGCTGGTTATGTATATTGTCACGCCTGTTTGTTACTGGCTTA 978
||||| |||||||||| ||| || | |||||| | | ||| || |||| || ||||| |
Sbjct 875 ATGTAACCATCGGTTTTGTGGTGATCATGTATGTCGCCACTCCAATTTGCTATTGGCTAA 934
Query 979 ACATTTATGACGCCAAGACCT-TCCCTATCTTCTCTAGCCAGCTCTTCATGGGTAATGGC 1037
| ||||| | ||||| || | |||| |||||||| || ||| |||||||| ||||||
Sbjct 935 ATATTTACAAAGCCAAAACATATCCC-ATCTTCTCAAGTGGGCTTTTCATGGGCAATGGC 993
Query 1038 TCA-CGTTATGATGTGTTGAGCATTATTGATA-GCAAGTTCCATCTTGACCGGGCGGTTT 1095
|| | | ||||||| || ||||| ||||||| | ||||| ||||| ||||| | | |
Sbjct 994 TCGTCCT-ATGATGTTTTAAGCATCATTGATAAG-AAGTTTCATCTCGACCGAGATATAT 1051
Query 1096 ACT-CTAGGACCGGCTCC-ATTAACATGAGCACCTTCTTTGCTGTTACTTATGGTCTCGG 1153
| | | | ||| || ||| || || |||||||| |||||||| || || |||||||| ||
Sbjct 1052 A-TGCAAAGACTGG-TCCTATCAATATGAGCACTTTCTTTGCAGTCACATATGGTCTTGG 1109
Query 1154 GTTTGCTACGTTGTCTGCCACCATTGTCCATGTCTTAGTCTTCAACGGAAGTGACTTGTG 1213
||||||||| ||||| || || ||||||||||| ||| ||||||||||||| || || ||
Sbjct 1110 GTTTGCTACTTTGTCCGCAACTATTGTCCATGTTTTACTCTTCAACGGAAGGGATTTATG 1169
Query 1214 GAAACAGACAAGAGGGGCCTTTAAAAAGGAT-AAGAAAATGGATATACACACAAGAATCA 1272
|||||| |||||||| || ||| | | ||| |||||||||||| | ||||| |||||||
Sbjct 1170 GAAACAAACAAGAGGTGCTTTTCAGA-GGAACAAGAAAATGGATTTCCACACGAGAATCA 1228
Query 1273 TGAAGAAAAACTACAGGGAAGTTCC-ATTGTGGTGGTTTT-TGGTCATCCTTTTACTGAA 1330
||||||||||||| ||||||||||| || ||||||||||| || | ||||| |||| ||
Sbjct 1229 TGAAGAAAAACTATAGGGAAGTTCCTAT-GTGGTGGTTTTATG-TGATCCTCGTACTCAA 1286
Query 1331 TATCGCGCTCATCATGTTCATCTCCGTGC-ACTACAACGCGACCGTGCAGCTTCCTTGGT 1389
|| ||||||||||||||||| || | | ||||||| || ||||||||||| |||||||
Sbjct 1287 CATTGCGCTCATCATGTTCATATCATT-CTACTACAATGCAACCGTGCAGCTACCTTGGT 1345
Query 1390 GGGGAGTGTTACTTGCTTGTGCCATTGCCATCT-CTTTCACTCCT-TTGATCGGTGTCAT 1447
|||||||||| || |||||||||||||| ||| ||| |||||| || |||||||| ||
Sbjct 1346 GGGGAGTGTTGCTAGCTTGTGCCATTGCTGTCTTCTT-CACTCCGCTT-ATCGGTGTTAT 1403
Query 1448 AGCTGCTACCACTAATCAGGCACCGGGTTTGAACATCATAACCGAGTATGTTATCGGGTA 1507
|| || ||||||||||||| ||||||||||||| |||| || || ||||| ||||||||
Sbjct 1404 CGCCGCCACCACTAATCAGGAACCGGGTTTGAACGTCATTACGGAATATGTAATCGGGTA 1463
Query 1508 TATATACCCGGAACGTCCTGTTGCCAACATGTG-TTTCAAGGTCTATGGATACATTAGTA 1566
| | || || |||||||| ||||| |||||||| ||| ||| | ||||||||||| || |
Sbjct 1464 TCTCTATCCAGAACGTCCGGTTGCTAACATGTGCTTTAAAG-TATATGGATACATCAGCA 1522
Query 1567 TGACTCAAGCGCTAACTTTCATTTCC--GATTTCAAGCTTGGTCAT-TACATGAAGATCC 1623
||||||| || ||||| ||||| || || ||||| || || | | ||||||||||| |
Sbjct 1523 TGACTCAGGCTCTAACATTCAT--CCAAGACTTCAAACTCGGAC-TCTACATGAAGATTC 1579
Query 1624 CGCCTAGATCCATGTTCATGGCTCAGGTGTTTGGGACTCTTGTGGCGGTTGTTGTTTACA 1683
| |||||| |||||||||||| |||||| ||||||| |||||| | || || || ||||
Sbjct 1580 CTCCTAGAAGCATGTTCATGGCACAGGTGGTTGGGACGCTTGTGTCTGTGGTAGTGTACA 1639
Query 1684 CAGGAACAGCTTGGTGGTTAATGGAAGAGATTCCTCATCTCTGTGACACGGCCTTGCTTC 1743
||||||| |||||||||||||||| ||| ||||||||||| ||||||| | |||||||
Sbjct 1640 CAGGAACTGCTTGGTGGTTAATGGTAGACATTCCTCATCTATGTGACAAATCTTTGCTTC 1699
Query 1744 CTTCAGACAGCCAATGGACTTGTCCCATGGACCGCGTTTTCTTTGACGCCTCTGTGATTT 1803
|| |||| ||| ||||||| |||||||||||||| || |||||||| || || || ||||
Sbjct 1700 CTCCAGATAGCGAATGGACATGTCCCATGGACCGTGTCTTCTTTGATGCTTCAGTTATTT 1759
Query 1804 GGGGACTAGTGGGACCACGTAGGGTGTTTGG-AGACCTT-GGAGAATACTCAAATGTCAA 1861
||||||| || ||||||||||| |||| || | || || ||||||||| || | ||
Sbjct 1760 GGGGACTTGTAGGACCACGTAGAATGTTCGGTA-AC-TTAGGAGAATACGCAGCCATAAA 1817
Query 1862 CTGGTTCTTCCTCGTCGGAGCCATAGCTCCACTCTTAGTTTGGCTAGCCAC-AAAG-ATG 1919
||||||||||||||| || || || ||||| |||| || |||||||| || |||| ||
Sbjct 1818 CTGGTTCTTCCTCGTAGGTGCAATCGCTCCTTTCTTTGTCTGGCTAGCGACCAAAGCAT- 1876
Query 1920 TTCCCGGCTCAGACATGGATCTCCAAGATTCATATCCCTGTTC-TTGTGGGAGCCACCGC 1978
| ||| ||||| | ||||||||| ||||||||| | || || | || | ||||| ||| |
Sbjct 1877 T-CCCAGCTCATAAATGGATCTCGAAGATTCATTTTCCGGT-CATTTTAGGAGCAACCTC 1934
Query 1979 AATGATGCCACCAGCAACAGCAGTTAACTTCACCAGCTGGCT-CATCGTCGCATTCATCT 2037
||||||||||| || | || ||||||||||| || ||| | |||||| ||||| | |
Sbjct 1935 GATGATGCCACCCGCGATGGCGGTTAACTTCACGAGTTGG-TGCATCGTTGCATTTGTGT 1993
Query 2038 TTGGCCACTTCATT-T-TCAAGTACAGGAGAGAGTGGTGGACGAAGTATAACTATGTGTT 2095
|||| ||||| || | | ||||||| |||| ||||||||| ||||||||||| || ||
Sbjct 1994 TTGGACACTTT-TTGTAT-AAGTACAAGAGACAGTGGTGGAAAAAGTATAACTACGTTTT 2051
Query 2096 GTCTGGTGGTTTAGACGCTGGCTCAGCTTTTATGACCATACTTCTGTTTCTGGCACTCGG 2155
||| |||||||||||||| ||| | || |||||||| |||||| | || || | | ||
Sbjct 2052 GTCGGGTGGTTTAGACGCGGGCACTGCGTTTATGACAATACTTATATTCCTATCGGTTGG 2111
Query 2156 ACGAAAAGGAATTGAAGTGCAGTGGTGGGGAAA 2188
||| |||||||||| | || ||||||||||||
Sbjct 2112 ACGCAAAGGAATTGGATTGTTGTGGTGGGGAAA 2144
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 122357173977
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5