BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492062
Length=3468
Score E
Sequences producing significant alignments: (Bits) Value
AT4G27370.1 | Symbols: VIIIB, ATVIIIB | P-loop containing nucle... 4246 0.0
AT5G54280.2 | Symbols: ATM2, ATMYOS1, ATM4 | myosin 2 | chr5:22... 1832 0.0
> AT4G27370.1 | Symbols: VIIIB, ATVIIIB | P-loop containing nucleoside
triphosphate hydrolases superfamily protein | chr4:13694881-13700780
REVERSE LENGTH=3405
Length=3405
Score = 4246 bits (2299), Expect = 0.0
Identities = 2535/2650 (96%), Gaps = 11/2650 (0%)
Strand=Plus/Plus
Query 826 AGTGGAGAAAGTGGAGCTGGGAAAACTGAGACAGCAAAATATGCAATGCAGTACTTGGAA 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 760 AGTGGAGAAAGTGGAGCTGGGAAAACTGAGACAGCAAAATATGCAATGCAGTACTTGGAA 819
Query 886 GCTCTTGGTGGAGGTAGCTTTGGGGTGGAAAATGAAATCCTAAAGACAAATTGTATTCTT 945
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 820 GCTCTTGGTGGAGGTAGCTTTGGGGTGGAAAATGAAATCCTAAAGACAAATTGTATACTT 879
Query 946 GAAGCTTTTGGGAATGCTAAAACATCAAGAAATGATAACTCTAGCCGATTCGGAAAACTG 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 880 GAAGCTTTTGGGAATGCTAAAACATCAAGAAATGATAACTCTAGCCGATTCGGTAAACTG 939
Query 1006 ATGGAGATTCATTTTAGTGCAAAGGGAAAGATATGCGGAGCTAAACTTGAAACTTTCTCT 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 940 ATGGAGATTCATTTTAGTGCAAAGGGAAAGATATGCGGAGCTAAACTTGAAACTTTCTCT 999
Query 1066 TTAAACCAGTCAAGAGTGGCTCAGCTGTGCAATGGCGAGAGATCCTACCATATCTTTTAT 1125
|| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1000 TTGGACCAGTCAAGAGTGGCTCAGCTGTGCAATGGCGAGAGATGCTACCATATCTTTTAT 1059
Query 1126 CAATTGTGTGCAGGAGCTTCACCAATTCTTAAAGAGAGATTGAAGCTTAAAGCAGCAAGT 1185
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1060 CAATTGTGTGCAGGAGCTTCACCAATTCTTAAAGAGAGATTGAAGATTAAAGCAGCAAGT 1119
Query 1186 GAATACGATTATTTGAACCAGAGCAATTGCTTAATCATGGATCGCACTGATGATGCTCAG 1245
|||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct 1120 GAATACAATTATTTGAACCAGAGCAATTGCTTAACCATTGATCGCACTGATGATGCTCAG 1179
Query 1246 AAATTTCACAAATTGATGGAAGCTTTCAACATTGTTCAAATTCCTCAAGAATACCAAGAA 1305
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1180 AAATTTCACAAACTGATGGAAGCTTTCAACATTGTTCAAATTCCTCAAGAATACCAAGAA 1239
Query 1306 CGTGTATTTGCACTGCTTGCAGCTGTGTTATGGCTAGGAAATGTATCTTTTAAAGTGACT 1365
||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct 1240 CGTACATTTGCACTGCTTGCAGCTGTGTTATGGCTAGGAAATGTATCTTTTGAAGTGATT 1299
Query 1366 GACAATGAAAACCATGTCGAAGTGGTAGCAGATGAAGCTGTAACTAATGTAGCTACGTTA 1425
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct 1300 GACAATGAAAACCATGTCGAAGTGGTAGCAGATGAAGCTGTCACTAATGTAGCTATGTTA 1359
Query 1426 ATGGGCTGCAACTCAAAAGAGCTTATGGTGGTTTTGTCTACATGCAAGCTCCAAGCTGGT 1485
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1360 ATGGGCTGCAACTCAAAAAAGCTTATGGTGGTTTTGTCTACATGCAAGCTCCAAGCTGGT 1419
Query 1486 AGAGATTGCATTGCTAAAAGACTGACACTGCGACAGGCAACTGATATGAGGGATTCCCTA 1545
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct 1420 AGAGATTGCATTGCTAAAAGACTGACATTGCGACAGGCAACTGATATGAGGGATTCTCTG 1479
Query 1546 GCGAAAATCATCTATGCGAGCCTATTCAACTGGCTTGTTGAGAAAATAAACATTTCACTG 1605
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1480 GCGAAAATCATCTATGCGAGCTTATTCAACTGGCTTGTTGAGCAAATAAACATTTCACTG 1539
Query 1606 GAAGTTGGTAACTCACGTACAGGAAGATCTATTAGCATCCTTGATATATATGGGTTTGAG 1665
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1540 GAAGTTGGTAACTCACGTACAGGAAGATCTATTAGTATCCTTGATATATATGGGTTTGAG 1599
Query 1666 TCATTTGAGAATAATAGTTTCGAACAATTTTGCATAAACTATGCAAATGAAAGACTGCAG 1725
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1600 TCATTTAAGGATAATAGTTTCGAACAATTTTGCATAAACTATGCAAATGAAAGACTGCAG 1659
Query 1726 CAACATTTCAACCGTCATCTATTTAAACTTGAACAAGAGGAATATGAAGGGGATGGAATT 1785
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1660 CAACATTTCAACCGACATCTATTTAAACTTGAACAAGAGGAATATGAAGGGGATGGAATT 1719
Query 1786 GATTGGACTAAGGTCGAATTCAAAGACAATCAAGAGTGTTTAAATCTGATTGAGAAGAAA 1845
|||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct 1720 GATTGGACTAAGGTCGAATTCATAGACAATCAAGAGTGTCTAAATCTGATTGAGAAGAAA 1779
Query 1846 CCCATTGGTTTGGTATCGCTATTAGATGAGGAATCAAATTTTCCAAAGGCTACTGATACG 1905
|||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct 1780 CCCATTGGTTTGGTATCGCTATTAAATGAGGAATCAAATTTTCCAAAGGCAACTGATACG 1839
Query 1906 ACGTTTGCCAACAAGCTCAAGCAGCATTTGAATGCTAACTCTTGTTTCAAGGGAGAGAGA 1965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1840 ACGTTTGCCAACAAGCTCAAGCAGCATTTGAATGCTAACTCTTGTTTCAAGGGAGAGAGA 1899
Query 1966 GGTCAGGGTTTCAGAATTAAGCATTATGCCGGAGAGGTTCTCTATAATACAAATGGCTTC 2025
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1900 GGTCGGGGTTTCAGAATTAAGCATTATGCCGGAGAGGTTCTCTATAATACAAATGGCTTC 1959
Query 2026 CTGGAAAAGAACAGAGATCCGCTACATGTTGATCTTATCCAACTTTTATCATCATGCAAA 2085
||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct 1960 CTGGAAAAGAACAGAGATCCGCTGCATGTTGATCTTATCCAACTTTTATCATTGTGCAAA 2019
Query 2086 TGTCAATTATTGAACCTGTTTTCTACTAAGATGCGTCACGAGTTTCTAAAGCCGGCAACC 2145
|||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct 2020 TGTCAATTATTGAACCTGTTTTCTACTAAGATGCATCACGATTTTCTAAAGCCGGCAACC 2079
Query 2146 TTTTCGGACTCCATGAATCAAAGTGTGATTACAAAATTTAAGGGCCAACTTTTCAAGTTG 2205
|||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||
Sbjct 2080 TTTTCGGACTCCATGAATCAAAGTGTGATTGCCAAGTTTAAGGGCCAACTTTTCAAGTTG 2139
Query 2206 ATGAACAAGTTAGAAGACACCACTCCTCATTTTATTCGATGCATAAAGCCAAATTCAAAT 2265
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 2140 ATGAACAAGTTAGAAGACACTACTCCTCATTTTATTCGATGCATAAAACCAAATTCAAAT 2199
Query 2266 CAGCTTCCTGGACTTTACGAAGAGAATCATGTTCTACAACAGCTTAGATGTTGTGGCGTT 2325
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2200 CAGCTTCCTGGACTTTACGAAGAAAATCATGTTCTACAACAGCTTAGATGTTGTGGCGTT 2259
Query 2326 TTGGAAATTGTTAGAATTTCAAGATCAGGATATCCTACTCGGTTGACACATCAAGAGCTT 2385
||||| ||||||||||| |||||||||||||||||||| ||||||||||| || ||||||
Sbjct 2260 TTGGAGATTGTTAGAATATCAAGATCAGGATATCCTACGCGGTTGACACACCAGGAGCTT 2319
Query 2386 GCAGTAAGATATGGATGCCTACTGCTGGACACAAGAATCTCCCAGGAGCCGCTTAGCACA 2445
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 2320 GCAGTAAGATATGGATGCCTACTGCTGGACACAAGAATCTCCCAGGATCCACTTAGCACA 2379
Query 2446 TCAAATGCTATTCTGAAACAATGCAATCTTCCTCCTGAAATGTATCAAGTTGGTTATACG 2505
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2380 TCAAAAGCTATTTTGAAACAATGCAATCTTCCTCCTGAAATGTATCAAGTTGGTTATACG 2439
Query 2506 AAAATATACCTCCGAACTGGACTAATTGGCGTCCTTGAGGAAAGAAGAAAA-TATGTTTT 2564
||||||||||||||||||||| ||||| |||||||||||||||||| |||| ||||||||
Sbjct 2440 AAAATATACCTCCGAACTGGAGTAATTAGCGTCCTTGAGGAAAGAA-AAAAGTATGTTTT 2498
Query 2565 GCGTGGCATACTTGGATTACAGAAGCAATTTCGTGGTTATCAGGCTCGTGAATGCTTTCA 2624
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct 2499 GCGTGGCATACTTGGATTACAGAAGCAATTTCGTGGTTATCAGACTCGTGAATACTTTCA 2558
Query 2625 CAATATGAGGAATGCTGCAGTGATACTTCAGTCATATATCCGCGGAGAAAATGCCAGGAG 2684
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2559 CAATATGAGGAATGCTGCAGTGATACTTCAGTCATATATCCGTGGAGAAAATGCCAGGAG 2618
Query 2685 AAACTACATTGTGGTAAAAGAATCAGCTATTGTTTCCACAGCAATAACTGAAGAGCTTGA 2744
|||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2619 AAACTACATTGTGGTAGGAGAATCAGCTATTGTTTCCACAGCAATAACTAAAGAGCTTGA 2678
Query 2745 TGCAGCTATACACTTGCAATATATGGTACGCAAATGGCTGGCTCGTAAACACTTAAATAG 2804
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2679 TGCAGCTATACACTTGCAATATATGGTACGCAAATGGCTGGCTCGTAAACTCTTAAATAG 2738
Query 2805 TATGCAACAGAAGAAAAAACCACGCAATGAGAAGAAACAACCGAGAAGAAAGTCAACGAG 2864
|| |||||||||||| ||||| ||||||||||||||| || |||||||||||||||| |
Sbjct 2739 TACGCAACAGAAGAACAAACCTCGCAATGAGAAGAAAAAAACGAGAAGAAAGTCAACAAA 2798
Query 2865 GAGGGTTTCCGAAGACAAGGTAGTATTTTTTCCT-G-ATTTATGTGACCCA-CCTTGTGT 2921
|||||||||||||||||||| | | | ||| | | | || || | ||| ||||||||
Sbjct 2799 GAGGGTTTCCGAAGACAAGGAACT-TCTTT-CAGAGCAGTT-TGAGGTCCAACCTTGTGT 2855
Query 2922 TCTTGCTGATCTCCAAAGCCGGGTTCAGAAAGTCGAAGCAGCTATAATGCAGAAGGAAGA 2981
||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2856 TCTTGCTGATCTCCAGAGCCGGGTTCTGAAAGTCGAAGCAGCTATAATGCAGAAGGAAGA 2915
Query 2982 TGAAAACACTGCATTGCAGGAGGAGTTGCAACGATTTGAGGAAAGATGGTTAGAGAACGA 3041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2916 TGAAAACACTGCATTGCAGGAGGAGTTGCAACGATTTGAGGAAAGATGGTTAGAGAACGA 2975
Query 3042 AGCAAGAATGAAGTCAATGGAGGAAACATGGCAAAAGCATATGTCGTCAATGCAGATGAG 3101
| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2976 AACAAGAATGAAGTCAATGGAGGACACATGGCAAAAGCATATGTCGTCAATGCAGATGAG 3035
Query 3102 TCTCGCAGCTGCCTGTAAGATTCTGGCTCCAGACAAGACTGCAAGTCAAGGTAATGAGTC 3161
||||||||||||||||||| || ||||||||||||||||||||||||| |||| ||| ||
Sbjct 3036 TCTCGCAGCTGCCTGTAAGGTTTTGGCTCCAGACAAGACTGCAAGTCACGGTACTGACTC 3095
Query 3162 AGAGGATACAATGTCCTTTGGAACTCCCACGAAAGAGCTTAAGCGCAGCTTGAGTGAAGT 3221
||| || ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||
Sbjct 3096 AGAAGACACAATGTCCTTTGGAACCCCCACGAAAGAGCTTAAGGGCAGCTTGAGTGACGT 3155
Query 3222 TAATAATCTTTCTAGAGAATTTGATCAACGGAGTGTCATAATTCACGAAGATGCGAAAAG 3281
|||||||||||||| ||||||||||||||| || |||||||||||||||||| |||||||
Sbjct 3156 TAATAATCTTTCTACAGAATTTGATCAACGAAGCGTCATAATTCACGAAGATCCGAAAAG 3215
Query 3282 TCTTGTCGAGGTGAATTCACA---GAGCTCAAGCAGGAAGCAGCACGCAGAAGAACTCAG 3338
||||||||||||||| ||| | || ||||| |||||||||||||||||||||||||||
Sbjct 3216 TCTTGTCGAGGTGAAATCAGACTCGATCTCAAACAGGAAGCAGCACGCAGAAGAACTCAG 3275
Query 3339 GAGACTAAAGTTAAGATTTGAGAAATGGAAGAAAGATTACAAAGCAAGACTAAGAGAGAC 3398
||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 3276 GAGACTAAAGTCAAGATTTGAGAAATGGAAGAAAGATTACAAAACAAGACTAAGAGAGAC 3335
Query 3399 GAAGGCAAGAATCCGGTCAAATGGTGATGAAGGTCGTCATCGGAATTGGTGGTGCAAGAA 3458
||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 3336 AAAGGCAAGAGTCCGGTTAAATGGTGATGAAGGTCGTCATCGGAATTGGTGGTGCAAGAA 3395
Query 3459 AAGTTGTTGA 3468
||||| ||||
Sbjct 3396 AAGTTATTGA 3405
Score = 950 bits (514), Expect = 0.0
Identities = 686/763 (90%), Gaps = 36/763 (5%)
Strand=Plus/Plus
Query 1 ATGATGAAAATTTCAGTGAAGGAAACGTTGGAGTCTCTTCGCCAGCATGATGCAAGCGAG 60
|||||||||| |||||||||||||| |||||||||||||||| || |||| ||||| |
Sbjct 1 ATGATGAAAAGTTCAGTGAAGGAAATTTTGGAGTCTCTTCGCCTGCTTGATTCAAGC--G 58
Query 61 AGGTTTAAGGAGAATTCGTCGTCCTCGCTTCCCTCTCGGTCTACTTTCAGGGCTCAAATG 120
| | | | | || | || ||||||||||||| ||||||||||||||||| ||||
Sbjct 59 A-G----A-G-G---TC-T--TCGTCGCTTCCCTCTCCGTCTACTTTCAGGGCTCCAATG 105
Query 121 CCGTCCATTCGTCAATCTCTTCCGGCGAACTTCCGTAATGCAATTGCGCCGGAAAGCGAA 180
|||| ||||||||||||||||||||||| || |||||||||||| ||| ||||||| ||
Sbjct 106 CCGTTGATTCGTCAATCTCTTCCGGCGAAGTTTCGTAATGCAATTTCGCTGGAAAGCAAA 165
Query 181 ACCATAGAGAAAGAAGACAAGGATTGGAGCACTGAGCAGATCACACAATCGCCATACACG 240
||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 166 ACCATAGAGAAAGAAGACAAGGATTGGAGCACTGAGCAGATCACACAAT---C-T----- 216
Query 241 GCAGAGAAGGAGAAAACTGAAAATGAAGTTGTGAAGATTAGTACTCCTCAGATGAGTCCA 300
||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |
Sbjct 217 GCAGAGAAGGAGAAAACTGGAAATGAAGTTGTGAAGATTAGTACTGCTCAGATGAGTCGA 276
Query 301 GCGAAGAACTCGCATGATCCTGAATGGATCAATAACGCTGAGTATTTTATCAGAGAGAAA 360
|||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||
Sbjct 277 GCGAAGAACTCGCATGATCCTGAATGGATCAATAGCGCTGAGTATTTCGTCAGGGAGAAA 336
Query 361 CTTTGTGTTTGGTTTCG-G--GTTGCTAATGGGCAGTGGCACTTGGGGAAGATACATTCT 417
||||||||||||| ||| | | |||||||||||||||||||||||||||||||||||||
Sbjct 337 CTTTGTGTTTGGTGTCGAGTTGCTGCTAATGGGCAGTGGCACTTGGGGAAGATACATTCT 396
Query 418 A---CTTCTAGTGATGATGTGTGTGTTATGTTATCCACTAACGACGATGTTGTGAAAGTA 474
| |||||||||||||||||||||||||| | ||| |||||||||| ||| ||| |
Sbjct 397 ACTTCTTCTAGTGATGATGTGTGTGTTATGCTGTCCGCTAACGACGA---TGT--AAG-A 450
Query 475 TCAATGGAGGAGATTTTCCCTGCTAACCCAGAGATTTTGGAAGGAGTTGAAGACCTTACA 534
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 451 ACAATGGAGGAGATTTTCCCTGCTAACCCAGAGATTTTAGAAGGAGTTGAAGACCTTACT 510
Query 535 CAGCTTAGTTATTTGAATGAACCATCTCTTCTTTACAACCTCCGGGTCAGATACTCGCAA 594
|||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||
Sbjct 511 CAGCTTAGTTATTTGAATGAGCCATCTCTTCTCTACAACCTCCGGGTCAGATACTCACAA 570
Query 595 GAATTGATTTATAGTAAAGCAGGGCCAGTTTTGATTGCAGTAAATCCGTTTAAGAATGTC 654
|| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 571 GACTTGATTTATAGTAAAGCAGGGCCAGTTTTGATCGCAGTAAATCCTTTTAAGAATGTC 630
Query 655 CAGATCTATGGAGAAGAGTTTCTATCAGCTTATCAGACGAAGGGTTTGGATGCTCCTCAT 714
||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||
Sbjct 631 CAGATCTATGGAGAAGAGTTTCTATCAGCTTATCAGAAGAATGCTTTGGATGCTCCTCAT 690
Query 715 GTTTATGCAGTGGCAGATGCAGCTTATGATGAGATGATGAGAG 757
|||||||||||||||||||||||||||||||| ||||||||||
Sbjct 691 GTTTATGCAGTGGCAGATGCAGCTTATGATGATATGATGAGAG 733
> AT5G54280.2 | Symbols: ATM2, ATMYOS1, ATM4 | myosin 2 | chr5:22039389-22046298
REVERSE LENGTH=4343
Length=4343
Score = 1832 bits (992), Expect = 0.0
Identities = 1925/2365 (81%), Gaps = 106/2365 (4%)
Strand=Plus/Plus
Query 826 AGTGGAGAAAGTGGAGCTGGGAAAACTGAGACAGCAAAATATGCAATGCAGTACTTGGAA 885
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |
Sbjct 1370 AGTGGAGAAAGTGGAGCTGGGAAAACTGAGACTGCAAAATTTGCAATGCAGTACTTGGCA 1429
Query 886 GCTCTTGGTGGAGGTAGCTTTGGGGTGGAAAATGAAATCCTAAAGACAAATTGTATTCTT 945
||||| ||||||||||||| ||| || || ||||||||||||| |||| || || ||
Sbjct 1430 GCTCTCGGTGGAGGTAGCTGTGGAGTAGAGTATGAAATCCTAAAAACAACCTGCATACTC 1489
Query 946 GAAGCTTTTGGGAATGCTAAAACATCAAGAAATGATAACTCTAGCCGATTCGGAAAACTG 1005
||||||||||| || ||||||||||||||||||| ||||||||||||||| || |||||
Sbjct 1490 GAAGCTTTTGGAAACGCTAAAACATCAAGAAATGCTAACTCTAGCCGATTTGGTAAACTC 1549
Query 1006 ATGGAGATTCATTTTAGTGCAAAGGGAAAGATATGCGGAGCTAAACTTGAAACTTTCTCT 1065
|| || |||||||||||||||| |||||||||||| ||||| |||||||||||||| |||
Sbjct 1550 ATAGAAATTCATTTTAGTGCAATGGGAAAGATATGTGGAGCCAAACTTGAAACTTT-TCT 1608
Query 1066 T-TAAACCAGTCAAGAGTGGCTCAGCTGTGCAATGGCGAGAGATCCTACCATATCTTTTA 1124
|| | |||||||||||| |||||||| ||||||||| |||||||| ||||| |||||
Sbjct 1609 GCTAGAGAAGTCAAGAGTGGTTCAGCTGTTCAATGGCGAAAGATCCTATCATATATTTTA 1668
Query 1125 TCAATTGTGTGCAGGAGCTTCACCAATTCTTAAAGAGAGATTGAAGCTTAAAGCAGCAAG 1184
| | |||||||||| |||||||| ||||||||||||||||||||||||||| |||||||
Sbjct 1669 TGAGCTGTGTGCAGGTGCTTCACCGATTCTTAAAGAGAGATTGAAGCTTAAAACAGCAAG 1728
Query 1185 TGA--ATACGATTATTTGAACCAGAGCAATTGCTTAATCATGGATCGCACT-GATGATGC 1241
||| |||| | | ||| |||||| ||||||| | ||| | || | ||||||||
Sbjct 1729 TGAGTATACC-T-ACCTGAGCCAGAGTGATTGCTTGACCATTGC-CGGTGTTGATGATGC 1785
Query 1242 TCAGAAATTTCACAAATTGA-TGGAAGCTTTCAACATTGTTCAAATTCCTCAAGAATACC 1300
|||||||||||||||| | | |||||||||| ||||||||||||| ||| |||| | |
Sbjct 1786 TCAGAAATTTCACAAACT-ACTGGAAGCTTTTGACATTGTTCAAATCCCTAAAGAGCATC 1844
Query 1301 AAGA-ACGTGTATTTGCACTGCTTGCAGCTGTGTTATGGCTAGGAAATGTATCTTTTAAA 1359
|||| | | | ||||||| |||||||||| ||||| ||||||||||||||||||||| |
Sbjct 1845 AAGAGAGG-GCATTTGCATTGCTTGCAGCAGTGTTGTGGCTAGGAAATGTATCTTTTCGA 1903
Query 1360 GTGACTGACAATGAAAACCATGTCGAAGTGGTAGCAGATGAAGCTGTAACTAATGTAGCT 1419
|| |||||||| ||||| ||||| || |||||||| ||||||||||| | |||| |||
Sbjct 1904 GTTACTGACAACGAAAATCATGTGGAGGTGGTAGCGGATGAAGCTGTCGCCAATGCCGCT 1963
Query 1420 ACGTTAATGGGCTGCAACTCAAAAGAGCTTATGGTGGTTTTGTCTACATGCAAGCTCCAA 1479
| |||||||||||||||| || |||||||||||||||||||||| || | || || |||
Sbjct 1964 ATGTTAATGGGCTGCAACACAGAAGAGCTTATGGTGGTTTTGTCCACCCGTAAACTTCAA 2023
Query 1480 GCTGGTA-GAGATTGCATTGCTAAAAGACTGACACTGCGACAGGCAACTGATATGAGGGA 1538
||||||| | ||||| |||||||||| ||||||| |||| ||||||||||| ||||||||
Sbjct 2024 GCTGGTACG-GATTGTATTGCTAAAAAACTGACATTGCGGCAGGCAACTGACATGAGGGA 2082
Query 1539 TTCCCTAGCGAAAATC-ATCTATGCGAGCCTATTCAACTGGCTTGTTGAGAAAATAAACA 1597
| |||| ||||| || ||||| | |||||| |||||||||||||| |||||||||
Sbjct 2083 TGGAATAGC-AAAATTTATTTATGCAAACCTATTTGACTGGCTTGTTGAGCAAATAAACA 2141
Query 1598 TTTCACTGGAAGTTGGTAACTCACGTACAGGAAGATCTATTAGCATCCTTGATATATATG 1657
|| || ||||||| ||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 2142 TTGCATTGGAAGTCGGTAAATCACGTACAGGAAGATCTATAAGCATCCTTGATATATATG 2201
Query 1658 GGTTTGAGTCATTTGAGAATAATAG-TTTCGAACAATTTTGCATAAACTATGCAAATGAA 1716
||||||| |||||| ||||||| || ||| |||||||| || |||||||| |||||||||
Sbjct 2202 GGTTTGAATCATTTAAGAATAACAGCTTT-GAACAATTCTGTATAAACTACGCAAATGAA 2260
Query 1717 AGACTGCAGCAACATTTCAACCGTCATCTATTTAAACTTGAACAAGAGGAATATGAAGGG 1776
||| |||||||||| |||||||| ||| ||||||||||||||||||||||||||||||
Sbjct 2261 AGATTGCAGCAACACTTCAACCGGCATTTATTTAAACTTGAACAAGAGGAATATGAAGAA 2320
Query 1777 GATGGAATTGATTGGACTAAGGTCGAATTCAAAGACAATCAAGAGTGTTTAAATCTGATT 1836
||||||||||||||||||||||||||||| ||||||||||||||| ||| |||| |||
Sbjct 2321 GATGGAATTGATTGGACTAAGGTCGAATTTGTAGACAATCAAGAGTGCTTAGATCTAATT 2380
Query 1837 GAGAAGAAACCCATTGGTTTGGTATCGCTATTAGATGAGGAATCAAATTTTCCAAAGGCT 1896
||||||||||| ||||||||| | || ||| |||| |||||||||||||||||||| ||
Sbjct 2381 GAGAAGAAACCAATTGGTTTGTTGTCTCTACTAGACGAGGAATCAAATTTTCCAAAAGCA 2440
Query 1897 ACTGATACGACGTTTGCCAACAAGCTCAAGCAGCATTTGAATG-CTAACTCTTGTTTCAA 1955
|||||| ||| |||||||||||||||||||| |||||||| | | |||||||| |||||
Sbjct 2441 ACTGATTTGACCTTTGCCAACAAGCTCAAGCAACATTTGAA-GACCAACTCTTGCTTCAA 2499
Query 1956 GGGAGAGAGAGGTC-AGGGTTTCAGAATTAAGCATTATGCCGGAGAGGTTCTCTATAATA 2014
||||||||||||| || || |||| |||| |||||||| ||||||||||||||| |||
Sbjct 2500 AGGAGAGAGAGGTCGAGCCTT-CAGAGTTAATCATTATGCTGGAGAGGTTCTCTATGATA 2558
Query 2015 CAAATGGCTTCCTGGAAAAGAACAGAGATCCGCTACATGTTGATCTTATCCAA-CTTTTA 2073
|||||||||| |||| |||||||| |||||| ||| || |||||||||| || ||||||
Sbjct 2559 CAAATGGCTTTTTGGAGAAGAACAGGGATCCGTTACCTGCTGATCTTATC-AATCTTTTA 2617
Query 2074 TCATCATGCAAATGTCAATTATTGAACCTGTTTTCTACTAAGATGCGTCACGAGTTTCTA 2133
||||||||| | || || || |||| ||||||| ||||| |||||| | | | | |
Sbjct 2618 TCATCATGCGACTGCCAGTTGCTGAAATTGTTTTCAACTAAAATGCGTGGCAAATCGCAA 2677
Query 2134 AAGCCGGCA-ACCTTTTCGGACTCCATGAATCAAAGTGT-G-ATTACAAAATTTAAGGGC 2190
||||| | | || |||||||||| ||| |||| ||| | | ||||| || |||||
Sbjct 2678 AAGCCA-CTTATGTTATCGGACTCCACGAACCAAACTGTTGGA--ACAAAGTTCAAGGGT 2734
Query 2191 CAACTTTTCAAGTTGATGAACAAGTTAGAAGA-CACCACTCCTCATTTTATTCGATGCAT 2249
||||||||||| ||||||||||||||||| || ||| | |||||| || |||||||||||
Sbjct 2735 CAACTTTTCAAATTGATGAACAAGTTAGA-GAACACAAGTCCTCACTTCATTCGATGCAT 2793
Query 2250 AAAGCCAAATTCAAATCAGCTTCCTGGACTTTACGAAGAGAATCATGTTCT-ACAACAGC 2308
|||||| |||||||| |||||||| || |||| |||||| ||| ||| || ||||||||
Sbjct 2794 AAAGCCGAATTCAAAGCAGCTTCCCAGAGTTTATGAAGAGGATCTTGT-CTTACAACAGC 2852
Query 2309 TTAGATGTTGTGGCGTTTTGGAAATTGTTAGAATTTCAAGATCAGGATATCCTACTCGGT 2368
|||||||||||||||| |||||| |||||||||| |||||||| |||||||||||||| |
Sbjct 2853 TTAGATGTTGTGGCGTGTTGGAAGTTGTTAGAATATCAAGATCTGGATATCCTACTCGTT 2912
Query 2369 TGACACATCAAGAGCTTGCAGTAAGATATGGATGCCTACTG-CTGGACACAAGAATCTC- 2426
|||||||||||||| |||||| ||||||||| | | || || | | ||| || || ||
Sbjct 2913 TGACACATCAAGAGTTTGCAGGAAGATATGGTTTCTTATTGTCAG-ACA-AA-AAGGTCG 2969
Query 2427 C-CAGGAGCCGCTTAGCACATCAAATGCTATTCTGAAACAATGCAATC-TTCCTCCTGAA 2484
| ||||| || || ||| ||||| |||| |||||||||||| | | ||| |||||||
Sbjct 2970 CTCAGGATCCTCTGAGCGTATCAATTGCTGTTCTGAAACAATATGA-CGTTCATCCTGAA 3028
Query 2485 ATGTATCAAGTTGGTTATACGAAAATA-TACCTCCGAACTGGACTAATTGGCG-TCCTTG 2542
||||||||||| ||||| || ||||| |||||||||||||||| |||||| | || |||
Sbjct 3029 ATGTATCAAGTGGGTTACAC-AAAATTGTACCTCCGAACTGGACAAATTGG-GATCTTTG 3086
Query 2543 AGGAAAGAAG-AAAATATGTT-TTGCGTGGCATACTTGGATTACAGAAGCAATTTC-GTG 2599
|||| | || |||| | ||| || | |||||| | || ||||| ||||| |||| |||
Sbjct 3087 AGGATCGGAGGAAAA-AGGTTCTT-CAAGGCATAGTGGGCTTACAAAAGCA-TTTCCGTG 3143
Query 2600 GTTATCAGG-CTCGTGAATGCTTTCACAATATGAGGAATGCTG-CAGTGATACTTCAGTC 2657
|| | | | |||||| || ||| || |||||| |||| | | || || | ||||||||
Sbjct 3144 GTCA-CTTGTCTCGTGCATACTTCCAAAATATGCGGAAAG-TAACATTGGTTCTTCAGTC 3201
Query 2658 ATATATCCGCGGAGAAAATGCCAGGAGAAACT---ACATTGTGGTAAAAGAATC-A-GCT 2712
|||||| || || ||||||||| | ||| | ||| || | |||| || | ||
Sbjct 3202 ATATATACGAGGTGAAAATGCCCGAAGATTGTTTGACACTGAAGCAAAAT--TCCATGCG 3259
Query 2713 -ATT--GTTTCC-ACAGCAATAACTGAAGAGCTTGA-TGCAG-CTATACACTTGCAATAT 2766
||| ||||| | ||||| || || ||| |||| ||||| | ||||||||||||| |
Sbjct 3260 GATTCTGTTTCTGA-AGCAAGCACAGATGAG-TTGAGTGCAGTC-ATACACTTGCAATCT 3316
Query 2767 ATGGTACGCAAATGGCTGGCTCGTAAACACTTAAATAGTATGCAACAGA-AGAAAA-AAC 2824
||| || |||| ||||||| ||||| || |||||||||||| ||| | |||| |||
Sbjct 3317 GCGGTTCGTGGATGGTTGGCTCGCAAACATTTCAATAGTATGCAA-AGACA-AAAAGAAC 3374
Query 2825 CACGCAATGAGAAGA-AACAACCGA-GAAGAAAG-TCAACGAGGAGGGTTTCCGAAGACA 2881
|||||||| | || || || | | || ||||| | | |||||| |||| |||||||
Sbjct 3375 TACGCAATGTGGCGACAA-AATCAAAGAGGAAAGCTGG-C-AGGAGGATTTCAGAAGACA 3431
Query 2882 AGGTAGTATTTTT-TCCTG-ATTTAT--GTG-ACCCACCTTGTGTTCTTGCTGATCTCCA 2936
||| | |||| | | | | | || | ||| | | | | | ||||||||||
Sbjct 3432 AGG-A-TATTCCTCTGGAGCAGCCACAAGTTCAACCAACATCTATG-T--CTGATCTCCA 3486
Query 2937 -AAGCCGGGTTCAGAAAGTC-GAAGCAGCTATAAT-GCAGAAGGAAGATGAAAACACTGC 2993
|| | || || |||| || ||||||||| || | |||||||||||| |||||||| ||
Sbjct 3487 GAAAC-GGATTTTGAAA-TCTGAAGCAGCTTTA-TCGCAGAAGGAAGAAGAAAACACAGC 3543
Query 2994 ATTGCAG-GAGGAGTTGCAA-CGATTTGAGGAAAGATGGTTAGAGAACGA-AGCAAGAAT 3050
||| || ||| ||||| | | ||||||||| ||||||| |||| | || | |||| |
Sbjct 3544 TTTG-AGAGAGCAGTTG-AGGCAATTTGAGGAGAGATGGTCAGAGTATGATATAAAGA-T 3600
Query 3051 GAAGTCAATGGAGGAAACATGGCAAAAGCATATGTCGTCAATGCAGATGAGTCTCGCAGC 3110
|||||||||||||||||||||||||||||| ||||| ||| ||||||||||||| || ||
Sbjct 3601 GAAGTCAATGGAGGAAACATGGCAAAAGCAAATGTCATCATTGCAGATGAGTCTTGCCGC 3660
Query 3111 TGCCT-GTAAGATTCTGGCTCCAGA 3134
|| | | |||| ||| ||| ||||
Sbjct 3661 CGC-TAGAAAGAGTCTAGCTGCAGA 3684
Score = 379 bits (205), Expect = 9e-104
Identities = 371/448 (83%), Gaps = 23/448 (5%)
Strand=Plus/Plus
Query 320 CTGAATGGATCAATAACGCTGAGTATTTTATC-AGAGAGAAACTTTGTGTTTGGTTTCGG 378
|||| |||| |||||||| |||||| || ||| ||| |||||||| | ||||||| ||||
Sbjct 909 CTGAGTGGAACAATAACGTTGAGTACTTCATCAAGA-AGAAACTTCGAGTTTGGTGTCGG 967
Query 379 GT-TGCTAATGGGCAGTGGC-ACTTGGGGAAGATACATTCTACTTCTAG-TGATGATGT- 434
|| | ||||||||||||||| || ||||||||||||| |||||||| | |||| | ||
Sbjct 968 GTAT-CTAATGGGCAGTGGCAAC-TGGGGAAGATACAGTCTACTTC-CGCTGAT-ACGTC 1023
Query 435 G-TGTGTTATGTTATCCACTAACGACGATGTTGTGAAAGTATC-AATGGAGGAGATTTTC 492
| | ||||||||| |||||| | | ||||||||||||| || | | || ||| ||||
Sbjct 1024 GCT-TGTTATGTTGTCCACT-GC-A-AATGTTGTGAAAGTGTCTACT-GAAGAGCTTTTT 1078
Query 493 CCTGCTAACCCAGAGATTTTGGAAGGAGTTGAAGACCTTACACAGCTTAGTTATTTGAAT 552
||||| |||||||| || |||||||| |||||||| |||| |||||| |||||| | |||
Sbjct 1079 CCTGCAAACCCAGATATATTGGAAGGTGTTGAAGATCTTATACAGCTCAGTTATCTAAAT 1138
Query 553 GAACCATCTCTTCTTTACAACCTCCGGGTCAGATACTCGCAAGAATTGATTTATAGTAAA 612
||||||||| ||||||| ||||| || |||||||| | |||||| ||||||||||||||
Sbjct 1139 GAACCATCTGTTCTTTATAACCTTCGTGTCAGATATTTGCAAGACGTGATTTATAGTAAA 1198
Query 613 GCAGGGCCAGTTTTGATTGCAGTAAATCCGTTTAAGAATGTCCAGATCTATGGAGAA-GA 671
||||| || || |||||||| || ||||| || |||||||| | || |||||| || ||
Sbjct 1199 GCAGGACCTGTATTGATTGCGGTCAATCCATTCAAGAATGTAGAAATTTATGGA-AATGA 1257
Query 672 GT-TTCTATCAGCTTATCAGACGAAGGGTT-TGGATGCTCCTCATGTTTATGCAGTGGCA 729
| || | ||||||||||||| ||| |||| |||||||||| ||||| ||||| |||||
Sbjct 1258 -TGTTATCTCAGCTTATCAGAAGAA-GGTTATGGATGCTCCACATGTCTATGCTGTGGCG 1315
Query 730 GATGCAGCTTATGATGAGATGATGAGAG 757
||||||||||||||||||||||||||||
Sbjct 1316 GATGCAGCTTATGATGAGATGATGAGAG 1343
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 172624450863
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5