BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492072
Length=2227
Score E
Sequences producing significant alignments: (Bits) Value
AT4G27260.1 | Symbols: GH3.5, WES1 | Auxin-responsive GH3 famil... 3518 0.0
AT5G54510.1 | Symbols: GH3.6, DFL1 | Auxin-responsive GH3 famil... 1764 0.0
> AT4G27260.1 | Symbols: GH3.5, WES1 | Auxin-responsive GH3 family
protein | chr4:13653609-13656204 FORWARD LENGTH=2246
Length=2246
Score = 3518 bits (1905), Expect = 0.0
Identities = 2136/2246 (95%), Gaps = 22/2246 (1%)
Strand=Plus/Plus
Query 1 CTCACACACTAAAAGCTTGCAAAAACCATAAG--------C-T--T-ATCTCTCTCACAA 48
|||||||||||||||||||||||||||||||| | | | |||||||||||||
Sbjct 1 CTCACACACTAAAAGCTTGCAAAAACCATAAGCTTATCTACTTACTCATCTCTCTCACAA 60
Query 49 ATCAtttttttCAAACTTCTCTC--TCTCTTAAACCATGCCTGAGGCACCAAAGAAGGTA 106
|||| |||| ||| ||||||||| ||||||||||||||||||||||||||||||| | |
Sbjct 61 ATCA-TTTTCTCAGACTTCTCTCTTTCTCTTAAACCATGCCTGAGGCACCAAAGAAAGAA 119
Query 107 TCTTTAGAGGTTTTTGATCTGACGCTTGACCaaaaaaaCAAGCAAAAGCTTCAGTTGATC 166
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 TCTTTAGAGGTTTTCGATCTGACGCTTGACCAAAAAAACAAGCAAAAGCTTCAGTTGATC 179
Query 167 GAAGAACTTACCTCTAACGCCGACCAATTCCAGAGACGTGTCTTGGAGGAGATCTTGTCC 226
|||||||| |||||||||||||||||| |||| |||| |||||||||||||||||| ||
Sbjct 180 GAAGAACTCACCTCTAACGCCGACCAAGTCCAAAGACAAGTCTTGGAGGAGATCTTGACC 239
Query 227 CGCAATGCTGACGTGGAGTATCTCCGGCGACACGACCTCAACGGTCGCACTGACCGAGAG 286
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct 240 CGCAATGCTGACGTGGAGTATCTCAGGCGACACGACCTCAACGGTCGCACTGACCGTGAG 299
Query 287 ACCTTCAAAAACGTCATGCCGGTTATCACCTACGAAGATATTCAGCCTGAGATCAACAGG 346
|| ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct 300 ACTTTCAAAAACATCATGCCCGTTATCACCTACGAAGATATTGAGCCTGAGATCAACAGG 359
Query 347 ATCGCTAATGGTGATAAATCACCTATCCTCTCTTCAAAACCCATCTCTGAGTTTCTCACA 406
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 360 ATCGCTAATGGTGATAAATCACCTATCCTCTCTTCCAAACCCATCTCTGAGTTCCTCACA 419
Query 407 AGCTCTGGGACATCTGGTGGGGAGAGGAAGCTAATGCCAACAATCGAAGAGGAACTAGAC 466
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 420 AGCTCTGGGACATCTGGTGGGGAGAGGAAGCTAATGCCAACAATCGAAGAGGAGCTAGAC 479
Query 467 AGAAGATCTCTCCTCTACAGTCTCTTGATGCCTGTGATGAGCCAGTTTGTTCCTGGTCTC 526
|| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 480 AGGAGATCACTCCTCTACAGTCTCTTGATGCCTGTGATGAGCCAGTTCGTTCCTGGTCTC 539
Query 527 GAAAATGGCAAAGGAATGTATTTCTTGTTCATCAAGTCCGAATCCAAGACACCAGGAGGC 586
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 540 GAAAACGGCAAAGGAATGTATTTCTTGTTCATCAAGTCCGAATCCAAGACTCCAGGAGGC 599
Query 587 CTCCCTGCTCGTCCCGTCTTAACCAGCTACTACAAGTCTTCCCATTTCAAAGAAAGACCC 646
|||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 600 CTCCCTGCTCGTCCTGTCTTAACCAGTTACTACAAATCTTCCCATTTCAAAGAAAGACCC 659
Query 647 TATGATCCTTACACCAACTACACAAGCCCTAACGAGACCATCCTTTGCTCTGACTCTTAC 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 TATGATCCTTACACCAACTACACAAGCCCTAACGAGACCATCCTTTGCTCTGACTCTTAC 719
Query 707 CAGAGCATGTATTCTCAGATGCTCTGTGGCTTATGTCAACACCAGGAGGTTCTTCGAGTC 766
||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct 720 CAGAGCATGTACTCTCAGATGCTTTGTGGCTTATGTCAACACCAGGAGGTTCTTAGAGTC 779
Query 767 GGCGCTGTCTTCGCCTCTGGATTCATCAGAGCCATCAAGTTTCTAGAGAAACACTGGA-C 825
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct 780 GGCGCTGTCTTCGCCTCTGGATTCATCAGAGCCATCAAGTTTCTTGAGAAACACTGGATC 839
Query 826 AGAGTTGGTCCGTGACATCAGAACCGGTACTCTGAGTTCCCTCATAACTGATCCTTCCGT 885
|||||||||||||||||||||||||| ||||| |||||||| || || |||||||| ||
Sbjct 840 -GAGTTGGTCCGTGACATCAGAACCGGGACTCTAAGTTCCCTGATCACCGATCCTTCAGT 898
Query 886 TCGCGAGGCGGTCTCCAAGATCCTTAAACCGAATTCAAAGCTCGCTGAGTTT-GTGGAAT 944
|| ||||||||| |||||||||||||||||| ||||||| ||||| ||| |||||||
Sbjct 899 GCGTGAGGCGGTCGCCAAGATCCTTAAACCGAGCCCAAAGCTAGCTGA-TTTCGTGGAAT 957
Query 945 TTGAGTGCAAGAAGTCGTCCTGGCAAGGGATTATTACTAGGCTGTGGCCTAACACAAAGT 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 958 TTGAGTGCAAGAAGTCGTCCTGGCAAGGGATTATTACTAGGCTGTGGCCTAACACAAAGT 1017
Query 1005 ATGTGGATGTGATTGTGACCGGGACAATGTCTCAATACATTCCAACTTTGGACTACTACA 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 ATGTGGATGTGATTGTGACCGGGACAATGTCTCAATACATTCCAACTTTGGACTACTACA 1077
Query 1065 GTAATGGCTTGCCTCTTGTCTGCACAATGTATGCTTCTTCCGAGTGTTACTTTGGTGTGA 1124
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 1078 GTAATGGCTTGCCTCTTGTCTGCACAATGTATGCTTCCTCTGAGTGTTACTTTGGTGTGA 1137
Query 1125 ATCTAAGGCCACTCTGCAAACCATGCGAGGTCTCATACACGCTCATACCATCCATGGCTT 1184
||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct 1138 ATCTAAGGCCACTCTGCAAACCAAGCGAGGTCTCTTACACGCTCATACCATCCATGGCTT 1197
Query 1185 ATTTCGAGTTCTTGCCTGTTCACAGAAACAACGGTGTTACTAACTCCATCAACCTTCCTA 1244
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1198 ATTTCGAGTTCTTGCCTGTTCATAGAAACAACGGTGTTACTAACTCCATCAACCTTCCTA 1257
Query 1245 AAGCACTCACTGAGAAAGAGCAACAAGAGCTTGTTGATCTAGTTGATGTCAAGCTTGGTC 1304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 AAGCACTCACTGAGAAAGAGCAACAAGAGCTTGTTGATCTAGTTGATGTCAAGCTTGGTC 1317
Query 1305 AGGAATACGAGCTTGTTGTCACCACTTACGCTGGGCTTTGCAGATACCGAGTTGGTGATT 1364
||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct 1318 AGGAATACGAGCTTGTTGTCACCACTTACGCCGGGCTTTGCAGATACAGAGTTGGTGATT 1377
Query 1365 TATTGAGAGTGACTGGATTCAAGAACAAAGCGCCTCAATTCAGTTTCATATGTCGCAAGA 1424
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1378 TATTGAGAGTGACTGGTTTCAAGAACAAAGCGCCTCAATTCAGTTTCATATGTCGCAAAA 1437
Query 1425 ATGTGGTCTTGAGCATAGATGCCGACAAGACCGATGAGGTTGAACTTCAGAACGCGGTGA 1484
|||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||
Sbjct 1438 ATGTGGTCTTGAGCATAGATTCCGACAAGACCGACGAGGTTGAGCTTCAGAACGCGGTGA 1497
Query 1485 AGAACGCAGTGACACACCTCGTCCCATTTCATGCCTCACTCTCTGAGTACACGAGCTATG 1544
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct 1498 AGAACGCAGTGACACACCTTGTCCCATTTGATGCCTCACTCTCTGAGTACACGAGCTATG 1557
Query 1545 CAGACACAAGTTCTATCCCGGGCCATTATGTCCTGTTCTGGGAGCTATGTTTGGATGGAA 1604
||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1558 CAGACACAAGTTCCATCCCAGGCCATTATGTCCTGTTTTGGGAGCTATGTTTGGATGGAA 1617
Query 1605 ACACACCGATCCCTCCATCGGTCTTTGAGGATTGCTGCTTAACTGTAGAAGAGTCGTTCA 1664
|||||||||||||||| |||||||| ||||| ||||||||| ||||||||||||| ||||
Sbjct 1618 ACACACCGATCCCTCCTTCGGTCTTCGAGGACTGCTGCTTAGCTGTAGAAGAGTCATTCA 1677
Query 1665 ACACTGTTTATAGACAAGGAAGGGTTAGTGACAAGTCCATAGGCCCGCTTGAGATCAAGA 1724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1678 ACACTGTTTATAGACAAGGAAGGGTTAGTGACAAGTCCATAGGCCCGCTTGAGATCAAGA 1737
Query 1725 TTGTTGAGCCAGGGACATTCGATAAGCTCATGGATTACGCGATCAGCTTGGGAGCATCGA 1784
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1738 TTGTTGAGCCAGGGACATTCGATAAGCTCATGGATTACGCAATCAGCTTGGGAGCATCGA 1797
Query 1785 TTAATCAGTATAAGACGCCGAGATGTGTGAAGTTTGCTCCAATCATCGAGCTATTGAACT 1844
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 1798 TTAATCAGTATAAGACGCCGAGATGCGTGAAGTTTGCTCCAATTATCGAGCTATTGAACT 1857
Query 1845 CGAGGGTTGTTAATAGTTACTTAAGCCCCAAGTGTCCTAAATGGGTCCCTGGTCACAAAC 1904
| ||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 1858 CAAGGGTTGTTGATAGTTACTTCAGCCCCAAGTGTCCTAAATGGGTTCCTGGTCACAAAC 1917
Query 1905 AGTGGGGAAGTAACTAAGATGGAATGTGGAACGTGAAGAGACTCTCTTTGAGCTAGAAGG 1964
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1918 AGTGGGGGAGTAACTAAGATGGAATGTGGAACGTGAAGAGACTCTCTTTGAGCTAGAAGG 1977
Query 1965 TTTGGGACTTGGACTTGCAAATGATGATGTCTTCTCTAATCTTAATTTTAGTTTAATCTT 2024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1978 TTTGGGACTTGGACTTGCAAATGATGATGTCTTCTCTAATCTTAATTTTAGTTTAATCTT 2037
Query 2025 TTGTTCttttttttt-GTTATCCTTTTAATATGCATAGTCCCTCTGGATTTGAAAAGCAG 2083
||||||||||||||| |||||||||||||||| |||||||||| ||| |||||||| |||
Sbjct 2038 TTGTTCTTTTTTTTTTGTTATCCTTTTAATATCCATAGTCCCTGTGGGTTTGAAAACCAG 2097
Query 2084 TTGTACAAAAGGCAAATCATGTTTTCTCCAACCAACTCTCATCACT-TT-CTCGAGCCTC 2141
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 2098 TTGTACAAAAGGCAAATCATGTTTTCTCCAACCAACTCTCATCACTCTTTCTCGAGCCTC 2157
Query 2142 TAAATCTTTCTATTGTTTAGTGCGTAATTGTTTGGACTTTTATCATTTACAAGCAACGTC 2201
|||| ||||||||||||| |||| ||||||||||||||||||||| || |||||||||
Sbjct 2158 CAAATTTTTCTATTGTTTAATGCGGAATTGTTTGGACTTTTATCATGTATAAGCAACGTG 2217
Query 2202 AAATTGCAAATTGCTAGGATGATTTT 2227
||||||||| |||||| |||||||||
Sbjct 2218 AAATTGCAATTTGCTAAGATGATTTT 2243
> AT5G54510.1 | Symbols: GH3.6, DFL1 | Auxin-responsive GH3 family
protein | chr5:22131093-22133678 REVERSE LENGTH=2181
Length=2181
Score = 1764 bits (955), Expect = 0.0
Identities = 1606/1918 (84%), Gaps = 53/1918 (3%)
Strand=Plus/Plus
Query 77 TAAACCATGCCTGAGGCACCAAAGAAGGTATCTTTAGAGGTTTTTGATCTGACG-CTTGA 135
||||| ||||||||||||||||||| | | |||| ||||||| |||| || | || |
Sbjct 109 TAAACGATGCCTGAGGCACCAAAGATCGCAGCTTTGGAGGTTTCTGATGAGA-GCCTCG- 166
Query 136 C-CaaaaaaaCAAGCAA-AAGCTTCAGTTGATCGAAGAAC-TTACCTCTAACGCCGACCA 192
| | || |||||| || || || || || ||||||| || | ||| | ||||| ||
Sbjct 167 CTGAGAAGAACAAG-AACAAACTCCAATTCATCGAAG-ACGTGACCACGAACGCAGA-TG 223
Query 193 AT-TCCAGAGACGTG-TCTTGGAGGAGAT-CTTGTCCCGCAATGCTGACGTGGAGTATCT 249
|| | |||||||| | |||| || ||||| ||| || || |||||||| |||||||||||
Sbjct 224 ATGTTCAGAGACGAGTTCTT-GAAGAGATCCTT-TCACGTAATGCTGATGTGGAGTATCT 281
Query 250 CCGGCGACACGACCTC-AACGGTCGCACTGACCGAGAGACCTTCAAAAACGTCATGCCGG 308
||||||| ||| || || || || || || ||||| |||||| | ||||||| |
Sbjct 282 TAAACGACACGGGCTCGAA-GGACGAACCGATCGTGAGACTTTCAAACATATCATGCCTG 340
Query 309 TTATCACCTACGAAGATATTCAGCCTGAGATCAACAGGATCGCTAATGGTGATAAATCAC 368
| | || |||||||||||||| |||||||||||||| ||||| ||||||||||| ||
Sbjct 341 TCGTAACTTACGAAGATATTCAACCTGAGATCAACAGAATCGCCAATGGTGATAAGTC-T 399
Query 369 CTA-TCCTCTCTTCAAAACCCATCTCTGAGTTTCTCACAAGCTCTGGGACATCTGGTGGG 427
| | |||||| ||| || |||||||||||||| |||||||| |||||||| ||||||||
Sbjct 400 CAAGTCCTCTGTTCTAACCCCATCTCTGAGTTCCTCACAAGTTCTGGGACTTCTGGTGGA 459
Query 428 GAGAGGAAGCTAATGCCAACAATCGAAGAGGAACTAGACAGAAGATCTCTCCTCTACAGT 487
|||||||| || ||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 460 GAGAGGAAACTGATGCCAACAATCGAAGAGGAACTAGACAGAAGATCACTTCTCTACAGT 519
Query 488 CTCTTGATGCCTGTGATG-AGCCAGTTTGTTCCTGGTCTCGA-AAATGGCAAAGGAATGT 545
|||||||||||||||||| | |||||||||||||||||| || ||| |||||||| ||||
Sbjct 520 CTCTTGATGCCTGTGATGGA-CCAGTTTGTTCCTGGTCTTGACAAA-GGCAAAGGGATGT 577
Query 546 ATTT-CTTGTTCATCAAGTCCGAATCCAAGACACCAGGAGGCCTCCCTGCTCGTCCCGTC 604
|||| || ||| ||||| || ||||||||||||||||| || |||||||||||||| ||
Sbjct 578 ATTTTCT-GTTTATCAAATCAGAATCCAAGACACCAGGTGGTCTCCCTGCTCGTCCTGTT 636
Query 605 TTAACCAGCTACTACAAGTCTTCCCATTTCAAAGAA-AGACCCTATGATCCTTACACCAA 663
|||||||| |||||||| || || || |||||| || ||||| |||||||||||||||||
Sbjct 637 TTAACCAGTTACTACAAATCCTCTCACTTCAAA-AACAGACCTTATGATCCTTACACCAA 695
Query 664 CTACACAAG-CCCTAACGAGACCATCCTTTGCTCTGACTCTTACCAGAGCATGTATTCTC 722
||||||||| ||| ||| | ||||||||||| ||||||||||||||||||||||| ||||
Sbjct 696 CTACACAAGTCCC-AACCAAACCATCCTTTGTTCTGACTCTTACCAGAGCATGTACTCTC 754
Query 723 AGATGCTCTGTGGCTTATGTCAACACCAGGAGGTTCTTCGAGTCGGCGCTGTCTTCGCCT 782
| ||||| ||||| ||||| |||||| | ||||||||||| || || ||||| || ||||
Sbjct 755 AAATGCTTTGTGGTTTATGCCAACACAAAGAGGTTCTTCGTGTTGGTGCTGTTTTTGCCT 814
Query 783 CTGGATTCATCAGAGCCATCAAGTTTCTAGAGAAACACTGGACAGAGTTGG-TCCGTGAC 841
|||| ||||| ||||||||||||||||| |||||||| ||| | ||| | | || |||||
Sbjct 815 CTGGTTTCATTAGAGCCATCAAGTTTCTTGAGAAACATTGGCCTGAGCTAGCTC-GTGAC 873
Query 842 ATCAGAACCGGTACTCTGAGTTCCCTCATAACTGATCCTTCCGTTCGCGAGGCGGTCTCC 901
|| |||||||||||||| |||||| ||||| ||| |||| ||||| |||||||||
Sbjct 874 ATTAGAACCGGTACTCTCAGTTCCGAGATAACCGATTCTTCGGTTCGTGAGGCGGTCGGG 933
Query 902 AAGATCCTTAAACCGAATTCAAAGCTCGCTGAGTTT-GTGGAATTTGAGTGCAAGAAGTC 960
|||| ||||||||| || | ||||| ||||| ||| || |||| ||| |||| |||| |
Sbjct 934 GAGATTCTTAAACCGGATCCTAAGCTTGCTGA-TTTCGTCGAATCTGAATGCAGGAAGAC 992
Query 961 GTCCTGGCAAGGGATTATTACTAGGCTGTGGCCTAACACAAAGTATGTGGATGTGATTGT 1020
|| ||||||||||| || |||||||| ||||| ||||| ||||||||||||||||||||
Sbjct 993 TTCTTGGCAAGGGATCATCACTAGGCTTTGGCCAAACACTAAGTATGTGGATGTGATTGT 1052
Query 1021 GACCGGGACAATGTCTCAATACATTCCAACTTTGGACTACTACAGTAATGGCTTGCCTCT 1080
||| || |||||||| || || ||||||||| |||| || ||||| ||||| ||||||||
Sbjct 1053 GACTGGAACAATGTCACAGTATATTCCAACTCTGGATTATTACAGCAATGGTTTGCCTCT 1112
Query 1081 TGTCTGCACAATGTATGCTTCTTCCGAGTGTTACTTTGGTGTGAATCTAAGGCCACTCTG 1140
|||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||
Sbjct 1113 TGTCTGCACAATGTATGCTTCTTCGGAGTGTTACTTCGGTGTGAATCTCAGGCCACTCTG 1172
Query 1141 CAAACCATGCGAGGTCTCATACACGCTCATACC-ATCCATGGCTTATTTCGAGTTCTTGC 1199
||||||| | || ||||| ||||| |||||||| | | ||||| ||||||||||||||||
Sbjct 1173 CAAACCAAGTGAAGTCTCTTACACTCTCATACCGAAC-ATGGCGTATTTCGAGTTCTTGC 1231
Query 1200 CTGTTCACAGAAACAACGGTGTTACTAACTCCATCAACCTTCCTAAAGCACTCACTGAGA 1259
||||||| || |||| || ||||||| ||| |||| ||||| ||||||||||||||||
Sbjct 1232 CTGTTCATAGGAACAGTGGAGTTACTAGCTCTATCAGTCTTCCAAAAGCACTCACTGAGA 1291
Query 1260 AAGAGCAACAAGAGCTTGTTGATCTAGTTGATGTCAAGCTTGGTCAGGAATACGAGCTTG 1319
|||| |||||||||||||||||||| || |||||||||||||||||||| ||||||||||
Sbjct 1292 AAGAACAACAAGAGCTTGTTGATCTCGTCGATGTCAAGCTTGGTCAGGAGTACGAGCTTG 1351
Query 1320 TTGTCACCACTTACGCTGGGCTTTGCAGATACCGAGTTGGTGATTTATTGAGAGTGACTG 1379
|||||||||| || |||||||||| ||| ||| |||| |||||| | | || ||| |||
Sbjct 1352 TTGTCACCACCTATGCTGGGCTTTACAGGTACAGAGTGGGTGATGTCCTAAGCGTGGCTG 1411
Query 1380 GATTCAAGAACAAAGCGCCTCAATTCAGTTTCATATGTCGCAAGAATGTGGTCTTGAGCA 1439
| ||||||||||| |||||||| ||||| |||||||| |||||||| |||||||| ||||
Sbjct 1412 GTTTCAAGAACAATGCGCCTCAGTTCAGCTTCATATGCCGCAAGAACGTGGTCTTAAGCA 1471
Query 1440 TAGA-TGCCGACAAGACCGATGAGGTTGAACTTCAGAACGCGGTGAAGAACGCAGTGACA 1498
| || | | ||||| |||||||||||||| ||||| ||||| || || ||||| || |||
Sbjct 1472 TTGACT-CGGACAAAACCGATGAGGTTGAGCTTCAAAACGCAGTTAAAAACGCGGTAACA 1530
Query 1499 CACCTCGTCCCATTTCATGCCTCACTCTCTGAGTACACGAGCTATGCAGACACAAGTTCT 1558
||||| || || ||| |||| |||||||| |||||||| |||||||| |||||| |||
Sbjct 1531 CACCTTGTTCCGTTTGATGCTTCACTCTCCGAGTACACTAGCTATGCGGACACATCATCT 1590
Query 1559 ATCCCGGGCCATTATGTCCTGTTCTGGGAGCTATGTTTGGATGGAAACACACCGATCCCT 1618
||||||||||| |||||| | ||||||||||| || ||| | || ||||| || || |||
Sbjct 1591 ATCCCGGGCCACTATGTCTTATTCTGGGAGCTCTGCTTGAACGGTAACACGCCAATTCCT 1650
Query 1619 CCATCGGTCTTTGAGGATTGCTGCTTAACTGTAGAAGAGTCG-TTCAACACTGTTTATAG 1677
|| |||||||| ||||||||||| ||||| |||| || || || |||| ||| |||||
Sbjct 1651 CCCTCGGTCTTCGAGGATTGCTGTTTAACCATAGAGGAATCACTT-AACAGTGTGTATAG 1709
Query 1678 ACAAGGAAGGGTTAGTGACAAGTCCATAGGCCCGCTTG-AGATCAAGATTGTTGAGCCAG 1736
|||||||||||| ||||| |||||||| || || ||| |||||||||| || ||| |||
Sbjct 1710 ACAAGGAAGGGTCAGTGATAAGTCCATTGGACCA-TTGGAGATCAAGATGGTCGAGTCAG 1768
Query 1737 GGACATTCGATAAGCTCATGGATTACGCGATCAGCTTGGGAGCATCGATTAATCAGTATA 1796
|||| |||||||||||||||||||| ||||| |||||||| |||||||| |||||||| |
Sbjct 1769 GGACTTTCGATAAGCTCATGGATTATGCGATAAGCTTGGGTGCATCGATCAATCAGTACA 1828
Query 1797 AGACGCCGAGATGTGTGAAGTTTGCTCCAATCATCGAGCTATTGAACTCGAGGGTTGTTA 1856
|||| || || ||||||||||||||||| ||||| ||||| || ||||| |||||||||
Sbjct 1829 AGACACCAAGGTGTGTGAAGTTTGCTCCGATCATTGAGCTTTTAAACTCTAGGGTTGTTG 1888
Query 1857 ATAGTTACTTAAGCCCCAAGTGTCCTAAATGGGTCCC-TGGTCACAAACAGTGGGGAAGT 1915
|||||||||| ||||||||||||||||||||| |||| ||||||||| || ||||| |||
Sbjct 1889 ATAGTTACTTCAGCCCCAAGTGTCCTAAATGG-TCCCCTGGTCACAAGCAATGGGGGAGT 1947
Query 1916 AACTAA-GATGGAA--TGTGG--AACGT-GAAGAGACTCTCTTTGA-GCTAGAAGGTT 1966
|||||| || |||| | ||| || | ||| ||||||||| ||| | |||||||||
Sbjct 1948 AACTAAAGA-GGAAACTTTGGGGAA-GAAGAA-AGACTCTCTATGAAG-TAGAAGGTT 2001
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 110491399545
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5