BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492079
Length=667
Score E
Sequences producing significant alignments: (Bits) Value
AT4G27160.1 | Symbols: AT2S3, SESA3 | seed storage albumin 3 | ... 946 0.0
AT4G27140.1 | Symbols: SESA1, AT2S1 | seed storage albumin 1 | ... 449 1e-125
AT4G27170.1 | Symbols: SESA4, AT2S4 | seed storage albumin 4 | ... 420 1e-116
AT4G27150.1 | Symbols: SESA2, AT2S2 | seed storage albumin 2 | ... 335 4e-91
> AT4G27160.1 | Symbols: AT2S3, SESA3 | seed storage albumin 3
| chr4:13611796-13612563 FORWARD LENGTH=768
Length=768
Score = 946 bits (512), Expect = 0.0
Identities = 635/690 (92%), Gaps = 26/690 (4%)
Strand=Plus/Plus
Query 1 ACTcaaaccaaaacaagaaaacatacacaaatagcaaaaaatggcaaacaaGCTCTTCCT 60
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 1 ACTCAAACCAAAACAAGAAAACATACACAAATAGCAAAACATGGCTAACAAGCTCTTCCT 60
Query 61 CGTCTGCGCAACTCTCGCCCTCTGCTTCCTCCTCACCAACGCTTCCATCTACCGCACAGT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 61 CGTCTGCGCAACTCTCGCCCTCTGCTTCCTCCTCACCAACGCTTCCATCTACCGCACCGT 120
Query 121 CGTCGAGTTCGAGGAAGATGACGCCACCAACCCCATGGGCCCAAGACAGAGATGCCAGAA 180
||||| ||||| ||||||||||||| ||||||| | || ||||||||||||||||||||
Sbjct 121 TGTCGAATTCGAAGAAGATGACGCCAGCAACCCCGTAGGTCCAAGACAGAGATGCCAGAA 180
Query 181 GGAGTTCCAGCAATCACAGCACCTAAGAGCTTGCCAGAGATGGATGCAG-AAGC-AA--A 236
|||||| ||||||||||| ||||||||||||||||||||||||||| || |||| || |
Sbjct 181 GGAGTTTCAGCAATCACAACACCTAAGAGCTTGCCAGAGATGGATG-AGCAAGCAAATGA 239
Query 237 --CAAGG-CAAGGTCGT-G----------G-CGATGAGTTCGATTTCGAGGGCCCCCAGC 281
||||| | ||| || | | |||||||||||||||||||||||||||||
Sbjct 240 GGCAAGGACGTGGTGGTGGTCCTTCCCTCGACGATGAGTTCGATTTCGAGGGCCCCCAGC 299
Query 282 AGGGACACCAGCTACTCCAGCAGTGCTGCAACGAGCTTCGCCAGGAAGAGCCAGTTTGCG 341
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 AGGGATACCAGCTACTCCAGCAGTGCTGCAACGAGCTTCGCCAGGAAGAGCCAGTTTGCG 359
Query 342 TTTGCCCCACCTTGAAACAGGCGGCTAGAGCTGTTAGACTCCAGGGACAGCACGGACCAT 401
||||||||||||||||||| || || || || ||||| ||||||||||||||||||||||
Sbjct 360 TTTGCCCCACCTTGAAACAAGCTGCCAGGGCAGTTAGCCTCCAGGGACAGCACGGACCAT 419
Query 402 TCGAATCCAGGAAAATTTACCAGACAGCTAAGTACTTGCCTAACGTTTGCAAAATCCAGC 461
|| |||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||
Sbjct 420 TCCAATCCAGGAAAATTTACCAGTCAGCTAAGTACTTGCCTAACATTTGCAAGATCCAGC 479
Query 462 AAGTTGGTGAATGTCCCTTCCAGAGCACCATCCCTTTCTTCCCTCCTTACTACTAGATTC 521
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 480 AAGTTGGTGAATGTCCCTTCCAGACCACCATCCCTTTCTTCCCTCCTTACTACTAGAGTC 539
Query 522 CAAG--C--CCTAGCACGATGATCATGAGTGTGGCTATTGATGTATGTTAATACTATACA 577
|||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 540 CAAGCCCGGCCTAGCACGATGATCATGAGTGTTGCTATTGATGTATGTTAATACTATACA 599
Query 578 CAGTCATCGTGTGTGTTTTATAAAACTGTAAGCTTAGGATGTTTGAGGCTAATGTAATTA 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 CAGTCATCGTGTGTGTTTTATAAAACTGTAAGCTTAGGATGTTTGAGGCTAATGTAATTA 659
Query 638 GCACTATACACCGTAATAAATGAGAGGTTT 667
|||||| ||||||||||||||||||||||
Sbjct 660 GCACTA--CACCGTAATAAATGAGAGGTTT 687
> AT4G27140.1 | Symbols: SESA1, AT2S1 | seed storage albumin 1
| chr4:13607329-13608031 FORWARD LENGTH=703
Length=703
Score = 449 bits (243), Expect = 1e-125
Identities = 539/669 (81%), Gaps = 72/669 (11%)
Strand=Plus/Plus
Query 18 aaaacatacacaaatagcaaaaaatggcaaacaaGCTCTTCCTCGTCTGCGCAACTCTCG 77
|||||||||||| |||||||||||||||||||||| | ||||||||||||||| ||||||
Sbjct 12 AAAACATACACACATAGCAAAAAATGGCAAACAAGTTGTTCCTCGTCTGCGCAGCTCTCG 71
Query 78 CCCTCTGCTTCCTCCTCACCAACGCTTCCATCTACCGCACAGTCGTCGAGTTCGAGGAAG 137
| |||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||
Sbjct 72 CTCTCTGCTTCCTCCTCACCAACGCTTCCATCTACCGCACCGTCGTTGAGTTCGAAGAAG 131
Query 138 ATGACGCCACCAACCCCATGGGCCCAAGACA-GAG-A--TGCCAG-AAGGAGTTCCAGCA 192
|||||||||| |||||||| ||||||| | | ||| | |||| | |||||||| ||| |
Sbjct 132 ATGACGCCACTAACCCCATAGGCCCAAAA-ATGAGGAAATGCC-GCAAGGAGTTTCAGAA 189
Query 193 ATCACAGCACCTAAGAGCTTGCCAG-AGATGGATGCAGAAGCAAACAAGGCAAGGTCGTG 251
| ||| |||||||||||||||||| | || ||||| ||||| |||||||||| |||
Sbjct 190 AGAACAACACCTAAGAGCTTGCCAGCA-ATTGATGCTCCAGCAAGCAAGGCAAGGCCGTA 248
Query 252 GCGATGAGTTCGATTTCGAGG--G-C--------CCC-CAG---CA---G--GGA-CACC 290
|||||||||| |||||||| | | | ||| ||| || | ||| || |
Sbjct 249 GCGATGAGTTTGATTTCGAAGACGACATGGAGAACCCACAGGGACAACAGCAGGAACAAC 308
Query 291 AGCTACTCCAGCAGTGCTGCAACGAGCTTCGCCAGGAAGAGCCAGTTTGCGTTTGCCCCA 350
||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 309 AGCTATTCCAGCAGTGCTGCAACGAGCTTCGCCAGGAAGAGCCAGATTGTGTTTGCCCCA 368
Query 351 CCTTGAAACAGGCGGCTAGAG-CTGTTAGACTCCAGGGACAGCACGGACCATT-CGAA-T 407
|||||||||| || || | || | ||||||||||||||||||||| |||| | | || |
Sbjct 369 CCTTGAAACAAGCTGCCA-AGGCCGTTAGACTCCAGGGACAGCACCAACCAATGC-AAGT 426
Query 408 CCAGGAAAATTTACCAGACAGCTAAGTACTTGCCTAACGTTTGCAAAATCCAGCAAGTTG 467
| |||||||||||||||||||| ||| ||||||| ||||||||| | |||| ||||||||
Sbjct 427 C-AGGAAAATTTACCAGACAGCCAAGCACTTGCCCAACGTTTGCGACATCCCGCAAGTTG 485
Query 468 GTGAATGTCCCTTCCAGAGCACCATCCCTTTC-TTCCCTCCTTACTACTAGAT-TC---C 522
|| ||||||||| | | || |||||| | |||||| ||| |||||| || || |
Sbjct 486 ATGTTTGTCCCTTC-A-A-CA---TCCCTT-CATTCCCTTCTTTCTACTAAATCTCAAAC 538
Query 523 AAGCCCT-AGCA-CGATGATCATGAGTGTGGCTATTGATGTAT----GTT-A-A-T--AC 571
|| |||| | | || | || | |||||||| | ||||| ||| ||| | | | ||
Sbjct 539 AAACCCTCAA-AGCG-T-ATGA-GAGTGTGGTTGTTGATATATACATGTTGACACTTGAC 594
Query 572 T-ATAC-ACAG-TCATCGTGTGTGTTT-T-ATAAAACTGTAAGCTTA-GGATGTTTGAGG 625
|||| ||| ||||||||||| ||| | ||||| ||||||||| ||||||||||||
Sbjct 595 ACATACCACACCTCATCGTGTGT-TTTATGATAAA--TGTAAGCTTTTGGATGTTTGAGG 651
Query 626 CTAATGTAA 634
||||||||
Sbjct 652 GTAATGTAA 660
> AT4G27170.1 | Symbols: SESA4, AT2S4 | seed storage albumin 4
| chr4:13613596-13614283 FORWARD LENGTH=688
Length=688
Score = 420 bits (227), Expect = 1e-116
Identities = 565/712 (79%), Gaps = 88/712 (12%)
Strand=Plus/Plus
Query 11 aaacaagaaaacatacac-a--aa-tagc--a-aa-aaatggcaaacaaGCTCTTCCTCG 62
|||||| ||||||||||| | || || | | || ||||||| ||||||||||||||||
Sbjct 5 AAACAA-AAAACATACACAAGTAATTAACTAACAACAAATGGCGAACAAGCTCTTCCTCG 63
Query 63 TCTGCGCAACTCTCGCCCTCTGCTTCCTCCTCACCAACGCTTCCATCTACCGCACAGTCG 122
|||||||| |||||||||| || ||| ||||||||||||||||| |||| ||||| || |
Sbjct 64 TCTGCGCAGCTCTCGCCCTGTGTTTCATCCTCACCAACGCTTCCGTCTATCGCACCGTTG 123
Query 123 TCGAGTTCGAGGAAGATGACGCCACCAACCCCATGGGCCCAAGACAGAGATGCCAGAAGG 182
|||||||||| ||||||||||||| |||||||| ||||||| ||||| ||| |||||||
Sbjct 124 TCGAGTTCGACGAAGATGACGCCAGTAACCCCATAGGCCCAATACAGAAATGTCAGAAGG 183
Query 183 AGTTCCAGCAATCA-CAGCACCTAAGAGCTTGCCAGAGATGGATGCAG-AAGCAAA---- 236
|||| |||||| | ||||||||||||||||||||||||||||||| | |||||||
Sbjct 184 AGTTTCAGCAA-GACCAGCACCTAAGAGCTTGCCAGAGATGGATGC-GCAAGCAAATGTG 241
Query 237 -CAAGG-CAAGGTCGTGG-C--------GA---TGAGTTCGATTTCGAGG--G-C--C-- 275
||||| | ||| |||| | || |||||||||| | || | | | |
Sbjct 242 GCAAGGACGTGGTGGTGGTCCTTCCCTCGACGATGAGTTCGATATGGAAGACGACATCGA 301
Query 276 ---CCCAGCAGGGAC-ACCAGCTACTCCAGCAGTGCTGCAACGAGCTTCGCCAGGAAGAG 331
||| |||| ||| || ||||||||||| ||||||||| |||||||||||| ||||||
Sbjct 302 GAACCC-GCAGAGACGAC-AGCTACTCCAGAAGTGCTGCAGCGAGCTTCGCCAAGAAGAG 359
Query 332 CCAGTTTGCGTTTGCCCCACCTTGAAACAGGCGGCTAGAG-CTGTTAGACTCCAGGGACA 390
||||||||||||||||||||||||| ||| || || | || | |||||| ||||||||||
Sbjct 360 CCAGTTTGCGTTTGCCCCACCTTGAGACAAGCTGCCA-AGGCCGTTAGATTCCAGGGACA 418
Query 391 GCA-CGGACCATTC-GA--A--TCCAGGAAAATTTACCAGACAGCTAAGTACTTGCCTAA 444
||| | |||| | || | || ||||||||||||||| |||||||||||||||||||
Sbjct 419 GCAAC--ACCAACCAGAGCAAGTC-AGGAAAATTTACCAGGCAGCTAAGTACTTGCCTAA 475
Query 445 CGTTTGCAAAATCCAGCAAGTTGGTGAATGTCCCTTCCAGAGCACCATCCCTTTCT-TCC 503
| |||||||||||||||||||||||| || |||||||||| |||||| | |||
Sbjct 476 CATTTGCAAAATCCAGCAAGTTGGTGTTTGCCCCTTCCAGA------TCCCTT-CAATCC 528
Query 504 CTCCTTACTACTAGATTCCAAGCCCTAGCACGATGATCATGAGTGTGGCTATTGATGTAT 563
|| |||||||||| |||||| | || | | || | | | |||||| | ||||| |||
Sbjct 529 CTTCTTACTACTAAATTCCA-G----AGAA-G-TG-TGA-GCGTGTGGTTGTTGATATAT 579
Query 564 GTTAATACTATACACAGTCATCGTGT-GTGTTTT-ATAAAACTGTAAGCTTAGG-ATGTT 620
||||| || |||| || ||| | ||||||| |||||| ||||||| || |||||
Sbjct 580 GTTAACAC----CACA-TC-TCGCCTTGTGTTTTTATAAAAAAATAAGCTTTGGGATGTT 633
Query 621 TGAGGCTAATGTAAT--T-AGCACTATACACCGTAATAAAT--GAGAGGTTT 667
||||||||||||||| | ||||||| | || ||||||||| |||||||||
Sbjct 634 TGAGGCTAATGTAATAATTAGCACTACA-AC-GTAATAAATAAGAGAGGTTT 683
> AT4G27150.1 | Symbols: SESA2, AT2S2 | seed storage albumin 2
| chr4:13609341-13610075 FORWARD LENGTH=735
Length=735
Score = 335 bits (181), Expect = 4e-91
Identities = 221/240 (92%), Gaps = 3/240 (1%)
Strand=Plus/Plus
Query 15 aagaaaacatacacaaatagc-aaaaaatggcaaacaaGCTCTTCCTCGTCTGCGCAACT 73
||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 29 AAGAATACAAACACAAATAGCAAAAAAATGGCAAACAAGCTCTTCCTCGTCTGCGCAACT 88
Query 74 CTCGCCCTCTGCTTCCTCCTCACCAACGCTTCCATCTACCGCACAGTCGTCGAGTTCGAG 133
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 89 TTCGCCCTCTGCTTCCTCCTCACCAACGCTTCCATCTACCGCACTGTTGTCGAGTTCGAC 148
Query 134 GAAGATGACGCCACCAACCCCATGGGCCCAAGACAGAGATGCCAGAAGGAGTTCCAGCAA 193
||||||||||||| ||||||||||||||||||||||| ||| ||||||||||| ||||||
Sbjct 149 GAAGATGACGCCAGCAACCCCATGGGCCCAAGACAGAAATGTCAGAAGGAGTTTCAGCAA 208
Query 194 TCACAGCACCTAAGAGCTTGCCAGAGATGGATGCAGAA-GCAAACAAGGCAAGGTCGTGG 252
||||||||||||||||||||||||| || ||||| | | ||||| |||||||| |||||
Sbjct 209 TCACAGCACCTAAGAGCTTGCCAGAAATTGATGC-GCATGCAAATGAGGCAAGGCCGTGG 267
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 32250322374
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5