BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492081
Length=650
Score E
Sequences producing significant alignments: (Bits) Value
AT4G27140.1 | Symbols: SESA1, AT2S1 | seed storage albumin 1 | ... 795 0.0
AT4G27150.1 | Symbols: SESA2, AT2S2 | seed storage albumin 2 | ... 592 2e-168
AT4G27170.1 | Symbols: SESA4, AT2S4 | seed storage albumin 4 | ... 492 2e-138
AT4G27160.1 | Symbols: AT2S3, SESA3 | seed storage albumin 3 | ... 459 2e-128
> AT4G27140.1 | Symbols: SESA1, AT2S1 | seed storage albumin 1
| chr4:13607329-13608031 FORWARD LENGTH=703
Length=703
Score = 795 bits (430), Expect = 0.0
Identities = 602/678 (89%), Gaps = 39/678 (6%)
Strand=Plus/Plus
Query 1 AAAAAATGGCAAACAAACTCTTCCTCGTCTGCGCAGCTCTCGCCCTCTGCTTCCTCCTCA 60
|||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||
Sbjct 30 AAAAAATGGCAAACAAGTTGTTCCTCGTCTGCGCAGCTCTCGCTCTCTGCTTCCTCCTCA 89
Query 61 CCAACGCTTCCATCTACCGCACCATCGTCGAGTTCGACGAGGATGACGCCACCAACCCCA 120
||||||||||||||||||||||| |||| |||||||| || ||||||||||| |||||||
Sbjct 90 CCAACGCTTCCATCTACCGCACCGTCGTTGAGTTCGAAGAAGATGACGCCACTAACCCCA 149
Query 121 TAGGCCCAAAAGTAAGGAAATGCCAG-AAGGAATTTCAGGAAGAACAACACCTAAGAGCT 179
||||||||||| | |||||||||| | ||||| |||||| ||||||||||||||||||||
Sbjct 150 TAGGCCCAAAAATGAGGAAATGCC-GCAAGGAGTTTCAGAAAGAACAACACCTAAGAGCT 208
Query 180 TGCCAGCAATTGATGCGCCGGCAAGCAAGGCAAGGCCGTAACGATGAGCTCGATTTCGAA 239
|||||||||||||||| || |||||||||||||||||||| ||||||| | |||||||||
Sbjct 209 TGCCAGCAATTGATGCTCCAGCAAGCAAGGCAAGGCCGTAGCGATGAGTTTGATTTCGAA 268
Query 240 GACGACATGGAGAACCCACAGGGCCCCCAGCAGGAAGAGA-AGCTATTCCAGCAGTGCTG 298
||||||||||||||||||||||| | ||||||||| | | |||||||||||||||||||
Sbjct 269 GACGACATGGAGAACCCACAGGGACAACAGCAGGAACA-ACAGCTATTCCAGCAGTGCTG 327
Query 299 CAACGAGCTTCGCCAGGAAGAGCCATATTGTGTTTGCCCCACCTTGAAACAAGCTGCCAA 358
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 328 CAACGAGCTTCGCCAGGAAGAGCCAGATTGTGTTTGCCCCACCTTGAAACAAGCTGCCAA 387
Query 359 GGCCGTTAGACTCCAGGGACAGCACCAACCAATGCAAGTCAGGAAAATTTTCCAGACAGC 418
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 388 GGCCGTTAGACTCCAGGGACAGCACCAACCAATGCAAGTCAGGAAAATTTACCAGACAGC 447
Query 419 TAAGAACTTGCCTAAAGTTTGCAACATCCCGCAAGTTGATGTTTGCCCCTTCAAGATCCC 478
||| ||||||| || |||||| |||||||||||||||||||||| |||||||| |||||
Sbjct 448 CAAGCACTTGCCCAACGTTTGCGACATCCCGCAAGTTGATGTTTGTCCCTTCAACATCCC 507
Query 479 TTCATTCCCTTCTTACTACTAAAT-TCCAAACAAAACTCTCAAAGCGTATGAGAGTGTGG 537
|||||||||||||| ||||||||| || ||||||| | ||||||||||||||||||||||
Sbjct 508 TTCATTCCCTTCTTTCTACTAAATCTC-AAACAAACC-CTCAAAGCGTATGAGAGTGTGG 565
Query 538 TTGTTGATA----C-------CAC---AC-C-T-C-A----TC-T--TGTGTTTTATGA- 571
||||||||| | ||| || | | | | || | ||||||||||||
Sbjct 566 TTGTTGATATATACATGTTGACACTTGACACATACCACACCTCATCGTGTGTTTTATGAT 625
Query 572 AAATGTAAGCTTTAGTATGTTTGAGGCTAATGTAATTAGCACTACTCCTTAATAAATAAG 631
||||||||||||| | |||||||||| |||||||| |||||||| | ||||||||||
Sbjct 626 AAATGTAAGCTTTTGGATGTTTGAGGGTAATGTAA---GCACTACT--T-AATAAATAAG 679
Query 632 AGTTTTGTTTATGTTTTT 649
|||||||||||| |||||
Sbjct 680 AGTTTTGTTTATATTTTT 697
> AT4G27150.1 | Symbols: SESA2, AT2S2 | seed storage albumin 2
| chr4:13609341-13610075 FORWARD LENGTH=735
Length=735
Score = 592 bits (320), Expect = 2e-168
Identities = 573/687 (83%), Gaps = 49/687 (7%)
Strand=Plus/Plus
Query 1 AAAAAATGGCAAACAAACTCTTCCTCGTCTGCGCAGCTCTCGCCCTCTGCTTCCTCCTCA 60
|||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||
Sbjct 51 AAAAAATGGCAAACAAGCTCTTCCTCGTCTGCGCAACTTTCGCCCTCTGCTTCCTCCTCA 110
Query 61 CCAACGCTTCCATCTACCGCACCATCGTCGAGTTCGACGAGGATGACGCCACCAACCCCA 120
|||||||||||||||||||||| | |||||||||||||| |||||||||| ||||||||
Sbjct 111 CCAACGCTTCCATCTACCGCACTGTTGTCGAGTTCGACGAAGATGACGCCAGCAACCCCA 170
Query 121 TAGGCCCAAAAGTAAGGAAATGCCAGAAGGAATTTCAGGAAGAACAACACCTAAGAGCTT 180
| ||||||| | | | ||||| |||||||| |||||| || ||| |||||||||||||
Sbjct 171 TGGGCCCAAGAC-A-G-AAATGTCAGAAGGAGTTTCAGCAATCACAGCACCTAAGAGCTT 227
Query 181 GCCAGCAATTGATGCGCCGGCAAGCAAGGCAAGGCCGTA------------------ACG 222
||||| ||||||||||| |||| |||||||||||| |||
Sbjct 228 GCCAGAAATTGATGCGCATGCAAATGAGGCAAGGCCGTGGTGGTGGTCCCTCCCTCGACG 287
Query 223 ATGAGCTCGATTTCGAAGACGACATGGAGAACCCACAGGGCCCCCAGCAGGAAGAGAAGC 282
||||| ||||||| ||||||||||| ||||||||||| ||||||||||||| | | ||
Sbjct 288 ATGAGTTCGATTTGGAAGACGACATCGAGAACCCACAAGGCCCCCAGCAGGGACACCAGA 347
Query 283 TATTCCAGCAGTGCTGCAACGAGCTTCGCCAGGAAGAGCCA-TATTGTGTTTGCCCCACC 341
| ||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||
Sbjct 348 TCCTCCAGCAGTGCTGCAGCGAGCTTCGCCAGGAAGAGCCAGT-TTGTGTTTGCCCCACC 406
Query 342 TTGAAACAAGCTGCCAAGGCCGTTAGACTCCAGGGACAGCACCAACCAATGCAAGTC-AG 400
|||| ||||||||||| ||||||||| ||||||||||| ||| |||| | ||| || ||
Sbjct 407 TTGAGACAAGCTGCCAGGGCCGTTAGCCTCCAGGGACAACACGGACCATTCCAA-TCCAG 465
Query 401 GAAAATTTTCCAGACAGCTAAGAACTTGCCTAA-AGTTTGCAACATCCCGCAAGTTGATG 459
|||||||| | ||||||||||| |||||||||| | ||||||| |||| |||||||| ||
Sbjct 466 GAAAATTTACAAGACAGCTAAGTACTTGCCTAACA-TTTGCAAGATCCAGCAAGTTGGTG 524
Query 460 TTTGCCCCTTCAAGA------TCCCTT-CATTCCCTTCTTACTACTAAATTCCAAACAAA 512
||||||||| ||| |||||| | |||||| ||||||| || ||||||||||||
Sbjct 525 AATGCCCCTTCCAGACCACCATCCCTTTC-TTCCCTCCTTACTAATAGATTCCAAACAAA 583
Query 513 A-CTCTCAAAGCGTATGAGAGTGTGGTTGTTGATAC-------CAC-AC-C-TCATCTTG 561
| | ||| | |||||||||||||||||||||||||| ||| || | ||||| ||
Sbjct 584 AACCCTCGA-GCGTATGAGAGTGTGGTTGTTGATACATGTTAACACCACACCTCATCGTG 642
Query 562 TGTTTTATGAAAATGTAAGCTTTAGTATGTTTGAGGCTAA-TGTAATTAGCACTACTCCT 620
| ||||||||||||||||| ||| | |||||||||||||| |||| ||||||| | ||||
Sbjct 643 TCTTTTATGAAAATGTAAGTTTTGG-ATGTTTGAGGCTAAATGTATTTAGCACAAGTCCT 701
Query 621 TAATAAATAAGAGTTTTGTTTATGTTT 647
|||||||||||||||||||||||||||
Sbjct 702 TAATAAATAAGAGTTTTGTTTATGTTT 728
> AT4G27170.1 | Symbols: SESA4, AT2S4 | seed storage albumin 4
| chr4:13613596-13614283 FORWARD LENGTH=688
Length=688
Score = 492 bits (266), Expect = 2e-138
Identities = 543/669 (81%), Gaps = 50/669 (7%)
Strand=Plus/Plus
Query 4 AAATGGCAAACAAACTCTTCCTCGTCTGCGCAGCTCTCGCCCTCTGCTTCCTCCTCACCA 63
||||||| ||||| ||||||||||||||||||||||||||||| || ||| |||||||||
Sbjct 40 AAATGGCGAACAAGCTCTTCCTCGTCTGCGCAGCTCTCGCCCTGTGTTTCATCCTCACCA 99
Query 64 ACGCTTCCATCTACCGCACCATCGTCGAGTTCGACGAGGATGACGCCACCAACCCCATAG 123
|||||||| |||| |||||| | |||||||||||||| |||||||||| ||||||||||
Sbjct 100 ACGCTTCCGTCTATCGCACCGTTGTCGAGTTCGACGAAGATGACGCCAGTAACCCCATAG 159
Query 124 GCCCAAAAGTAAGGAAATGCCAGAAGGAATTTCAGGAAGAACAACACCTAAGAGCTTGCC 183
|||||| | | | ||||| |||||||| |||||| |||| || ||||||||||||||||
Sbjct 160 GCCCAATAC-A-G-AAATGTCAGAAGGAGTTTCAGCAAGACCAGCACCTAAGAGCTTGCC 216
Query 184 AGCA-ATTGATGCGCCGGCAAGCAAGGCAAGGCCGTAACGATGAGCTCGATT---TCGA- 238
|| | || ||||||| |||| ||||||| ||| | || | || || ||||
Sbjct 217 AG-AGATGGATGCGCAAGCAAATGTGGCAAGGACGTGGTGGTG-G-TCC-TTCCCTCGAC 272
Query 239 -A-GA---CGACATGGA-GAACC-CA-C-AGGGCCCCCAGCAGGAAGAGAAGCTATTCCA 289
| || ||| ||||| || | || | || ||| ||| || | || | |||| ||||
Sbjct 273 GATGAGTTCGATATGGAAGA-CGACATCGAGAACCCGCAG-AG-ACGACA-GCTACTCCA 328
Query 290 GCAGTGCTGCAACGAGCTTCGCCAGGAAGAGCCA-TATTGTGTTTGCCCCACCTTGAAAC 348
| ||||||||| |||||||||||| ||||||||| | ||| |||||||||||||||| ||
Sbjct 329 GAAGTGCTGCAGCGAGCTTCGCCAAGAAGAGCCAGT-TTGCGTTTGCCCCACCTTGAGAC 387
Query 349 AAGCTGCCAAGGCCGTTAGACTCCAGGGACAGCA-C-C-AACCA-ATGCAAGTCAGGAAA 404
|||||||||||||||||||| ||||||||||||| | | ||||| | |||||||||||||
Sbjct 388 AAGCTGCCAAGGCCGTTAGATTCCAGGGACAGCAACACCAACCAGA-GCAAGTCAGGAAA 446
Query 405 ATTTTCCAGACAGCTAAGAACTTGCCTAA-AGTTTGCAACATCCCGCAAGTTGATGTTTG 463
|||| |||| |||||||| |||||||||| | ||||||| |||| |||||||| ||||||
Sbjct 447 ATTTACCAGGCAGCTAAGTACTTGCCTAACA-TTTGCAAAATCCAGCAAGTTGGTGTTTG 505
Query 464 CCCCTTCAAGATCCCTTCATTCCCTTCTTACTACTAAATTCCAAACAAAACTCTCAAAGC 523
||||||| ||||||||||| ||||||||||||||||||||||| | || | | | ||
Sbjct 506 CCCCTTCCAGATCCCTTCAATCCCTTCTTACTACTAAATTCCAGAGAAG--TGTGA--GC 561
Query 524 GTATGAGAGTGTGG-T-T--GTTGATACCACACCTCATCTTGTGTTTT-ATGAAAATGTA 578
|| || | ||| | | | ||| | |||||| ||| |||||||||| || |||| ||
Sbjct 562 GTGTG-GT-TGTTGATATATGTTAACACCACATCTCGCCTTGTGTTTTTATAAAAAAATA 619
Query 579 AGCTTTAGTATGTTTGAGGCTAATGTAAT--T-AGCACTACTCCTTAATAAATAAGAGT- 634
|||||| | |||||||||||||||||||| | |||||||| | |||||||||||||
Sbjct 620 AGCTTTGGGATGTTTGAGGCTAATGTAATAATTAGCACTACAACGTAATAAATAAGAGAG 679
Query 635 -TTTGTTTA 642
||||||||
Sbjct 680 GTTTGTTTA 688
> AT4G27160.1 | Symbols: AT2S3, SESA3 | seed storage albumin 3
| chr4:13611796-13612563 FORWARD LENGTH=768
Length=768
Score = 459 bits (248), Expect = 2e-128
Identities = 547/683 (80%), Gaps = 54/683 (8%)
Strand=Plus/Plus
Query 1 AAAAAATGGCAAACAAACTCTTCCTCGTCTGCGCAGCTCTCGCCCTCTGCTTCCTCCTCA 60
|||| ||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct 36 AAAACATGGCTAACAAGCTCTTCCTCGTCTGCGCAACTCTCGCCCTCTGCTTCCTCCTCA 95
Query 61 CCAACGCTTCCATCTACCGCACCATCGTCGAGTTCGACGAGGATGACGCCACCAACCCCA 120
||||||||||||||||||||||| | ||||| ||||| || |||||||||| |||||||
Sbjct 96 CCAACGCTTCCATCTACCGCACCGTTGTCGAATTCGAAGAAGATGACGCCAGCAACCCCG 155
Query 121 TAGGCCCAAAAGTA-AGGAAATGCCAGAAGGAATTTCAGGAAGAACAACACCTAAGAGCT 179
|||| || ||| | | || |||||||||||| |||||| || ||||||||||||||||
Sbjct 156 TAGGTCC--AAG-ACA-GAGATGCCAGAAGGAGTTTCAGCAATCACAACACCTAAGAGCT 211
Query 180 TGCCAGCA-ATTGATGCGCCGGCAAGCAAGGCAAGGCCGTAACGATGAGCTCGATT---T 235
|||||| | || |||| || |||| |||||||| ||| | || | || || |
Sbjct 212 TGCCAG-AGATGGATGAGCAAGCAAATGAGGCAAGGACGTGGTGGTG-G-TC-CTTCCCT 267
Query 236 CGAAGACGACATGGAGAACCCACAGGGCCCCCAGCAGGAAGAGAAGCTATTCCAGCAGTG 295
||| || || | || | ||||||||||||||| | | ||||| ||||||||||
Sbjct 268 CGACGATGA-GT-TCGATTTC-GAGGGCCCCCAGCAGGGATACCAGCTACTCCAGCAGTG 324
Query 296 CTGCAACGAGCTTCGCCAGGAAGAGCCA-TATTGTGTTTGCCCCACCTTGAAACAAGCTG 354
|||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||
Sbjct 325 CTGCAACGAGCTTCGCCAGGAAGAGCCAGT-TTGCGTTTGCCCCACCTTGAAACAAGCTG 383
Query 355 CCAAGGCCGTTAGACTCCAGGGACAGCACCAACCAATGCAAGTC-AGGAAAATTTTCCAG 413
||| ||| ||||| ||||||||||||||| |||| | ||| || |||||||||| ||||
Sbjct 384 CCAGGGCAGTTAGCCTCCAGGGACAGCACGGACCATTCCAA-TCCAGGAAAATTTACCAG 442
Query 414 ACAGCTAAGAACTTGCCTAA-AGTTTGCAACATCCCGCAAGTTGATGTTTGCCCCTTCAA 472
|||||||| |||||||||| | ||||||| |||| |||||||| || || |||||| |
Sbjct 443 TCAGCTAAGTACTTGCCTAACA-TTTGCAAGATCCAGCAAGTTGGTGAATGTCCCTTCCA 501
Query 473 GA------TCCCTT-CATTCCCTTCTTACTACTAAATTCCAAACAAAACTCT--CAA-A- 521
|| |||||| | |||||| |||||||||| | ||||| | | || || |
Sbjct 502 GACCACCATCCCTTTC-TTCCCTCCTTACTACTAGAGTCCAAGCCCGGC-CTAGCACGAT 559
Query 522 GCGT-ATGAGAGT-G-T---G--GT-TGTTGATACCACAC-C--TCATC-T-TGTGTTTT 567
| | ||||| || | | | || |||| |||| | || | ||||| | ||||||||
Sbjct 560 GA-TCATGAGTGTTGCTATTGATGTATGTTAATACTATACACAGTCATCGTGTGTGTTTT 618
Query 568 ATGAAAA-TGTAAGCTTTAGTATGTTTGAGGCTAATGTAATTAGCACTACTCCTTAATAA 626
|| |||| ||||||||| || ||||||||||||||||||||||||||||| || ||||||
Sbjct 619 AT-AAAACTGTAAGCTT-AGGATGTTTGAGGCTAATGTAATTAGCACTACACCGTAATAA 676
Query 627 ATAAGAGTTTTG-TTTATGTTTT 648
|| |||| ||| ||||||||||
Sbjct 677 ATGAGAGGTTTACTTTATGTTTT 699
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 31396341875
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5