BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg492129 Length=1102 Score E Sequences producing significant alignments: (Bits) Value AT2G16030.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 1336 0.0 AT4G26730.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 741 0.0 > AT2G16030.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr2:6973673-6974899 REVERSE LENGTH=1227 Length=1227 Score = 1336 bits (723), Expect = 0.0 Identities = 913/1002 (91%), Gaps = 24/1002 (2%) Strand=Plus/Plus Query 1 CGGCGACGATGGAGAGAAACGTCGAGAAGATGCTAAACAGAGTATCAGTCGTGTTCATAA 60 |||||||||||||||||||||||||||||||||| || ||||||||| | |||||| ||| Sbjct 1 CGGCGACGATGGAGAGAAACGTCGAGAAGATGCTGAAGAGAGTATCAATAGTGTTCTTAA 60 Query 61 GCATCGGAACAGTGTTAATGGTTATTATGATTCTCCAGACGCCGAAAACTTGTATTTCGC 120 ||||||||||||| |||||||| ||||||||||||||||| || |||||||||||||| | Sbjct 61 GCATCGGAACAGTATTAATGGTAATTATGATTCTCCAGACACCAAAAACTTGTATTTCTC 120 Query 121 CAGAAGCTCCATCGAAACCTCATACGCATTTTCCGAGATCCACCTGCGATTCATCGCCTC 180 ||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||| Sbjct 121 CAGAAGCTCCATCGAAACCTCATACGCATTTCCCGAGATCTACATGCGATTCATCGCCTC 180 Query 181 GTCAGCATCTTCCTCTCCCAAAGAAGAACGCTCGACTCTGGTCCTCTAAAGCTTGGAAAT 240 ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 181 GTCAGCATCTTCCTCTCCCAAAGAAGAACGCTCGAATCTGGTCCTCTGGAGCTTGGAAAT 240 Query 241 CGCGTCTCTCCTCCTTCTCAAATTACTTCCTCCGATTTCGCGATCTCGGATTCCTTCAAA 300 | ||||| | ||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct 241 CTCGTCTATACTCCTTCTCTACCTACTTCCTCCGATTTCGCGATCTCGGATTCATTCAAA 300 Query 301 AGCACACCAAAGCTCTCTGTCTCTCCGCCGGCGCAGGCCACACTCCGATGGCGCTTTCTA 360 | ||||||||||||||||||||||||||||| |||||||| ||| |||||| |||||| Sbjct 301 ATCACACCAAAGCTCTCTGTCTCTCCGCCGGAGCAGGCCATGCTCTGATGGCTCTTTCTC 360 Query 361 ATATCGGATTAGCTGACGTTACCGCCGTTGAATTGGTTGATTCGATTCCTCTTGTGAAAA 420 | ||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct 361 AGATCGGATTATCTGATGTTACCGCAGTTGAATTGGTTGATTCGATTCCTCTTGTGAAAA 420 Query 421 GAGCTGATCCTCATAACCTTCCGTTTTTCGACGGTGTCTTTGATTTTGCCTTCACTGCAC 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 GAGCTGATCCTCATAACCTTCCGTTTTTCGACGGTGTCTTTGATTTTGCCTTCACTGCAC 480 Query 481 ATCTAGCTGAAGCTCTGTTTCCGTGGCGGTTCGTGGAGGAAATGGAGAGGACTGTGCGAC 540 ||||||||||||||||||||||||||| ||| |||||||| ||||||||||| ||| ||| Sbjct 481 ATCTAGCTGAAGCTCTGTTTCCGTGGCAGTTTGTGGAGGAGATGGAGAGGACGGTGAGAC 540 Query 541 GCGGTGGGTTTTGTGTGGTTGCGGTTGATGAATGTGGTGGAGATGATGTTAGAGACATTG 600 | || || |||||||||||| |||||||||||||||||||||||||||| |||||||||| Sbjct 541 GTGGCGGATTTTGTGTGGTTTCGGTTGATGAATGTGGTGGAGATGATGTAAGAGACATTG 600 Query 601 CTAGGCTTTTTCATAAATCGAAAGTCGTTGATGTTGCTAATGTAACCTTAGAAGGATCCA 660 |||||||||||||||| || || ||||||||||||||||||||||||||||||||||||| Sbjct 601 CTAGGCTTTTTCATAACTCCAAGGTCGTTGATGTTGCTAATGTAACCTTAGAAGGATCCA 660 Query 661 AAAGGACTAGTATACTATTCAAAGTTCAAGACTCTACTACATGAGGTGTTTTAGTTTGTA 720 ||| ||||||||||||||||||||||||||||||| |||| |||||||||||| ||| Sbjct 661 AAAAGACTAGTATACTATTCAAAGTTCAAGACTCTCCTACCTGAGGTGTTTTA-TTT--- 716 Query 721 TTCTTCTCTTTTGATTGCGTTGATTTATAGGTCCTTTCTGGATTCTCAGAAAACTGCTTC 780 || || ||| |||| | || | || |||||| ||||||||||||||||||||| Sbjct 717 --CT-CT-TTT-GATT---T--AT--A--GGCCCTTTCCGGATTCTCAGAAAACTGCTTC 762 Query 781 AATGTTCATAGAGTGGAGCTAGATTTGTGTCTGTTGAATTTCACTTCCATGTTAGACAAA 840 ||| |||||||||||||||||||||||| ||||||||| ||||||| |||||| || ||| Sbjct 763 AATATTCATAGAGTGGAGCTAGATTTGTTTCTGTTGAAATTCACTTACATGTTTGA-AAA 821 Query 841 -CAGGAG-TTTCAACAGATTATGTGGTAACATTGTTCAAAGACCATGACCATATTTGTTT 898 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 822 GCAGGAGATTT-AACAGATTATGTGGTAACATTGTTCAAAGACCATGACCATATTTGTTC 880 Query 899 TCGATGCTAAACCAATGTTT-GTTGAGGGAAGCTGCAATGTTTGTTGCGAGTTCAAGATC 957 | ||| ||||| |||||||| ||||||||||||||| ||||||||||||||||||||||| Sbjct 881 TGGATCCTAAAGCAATGTTTTGTTGAGGGAAGCTGCGATGTTTGTTGCGAGTTCAAGATC 940 Query 958 CACAACAAAACCTTTCTACAGGTGAATATCTTCtttttttGG 999 || ||||||| |||||||||||| |||||||| ||||||||| Sbjct 941 CAGAACAAAAGCTTTCTACAGGTTAATATCTT-TTTTTTTGG 981 > AT4G26730.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr4:13472579-13473309 FORWARD LENGTH=627 Length=627 Score = 741 bits (401), Expect = 0.0 Identities = 477/514 (93%), Gaps = 4/514 (1%) Strand=Plus/Plus Query 185 GCATCTTCCTCTCCCAAAGAAGAACGCTCGACTCTGGTCCTCTAAAGCTTGGAAATCGCG 244 ||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||| Sbjct 72 GCATCTTCCTCTCCCAAAGAAGAACGCTCGAATCTGGTTCTCTGGAGCTTGGAAATCGCG 131 Query 245 TCTCTCCTCCTTCTCAAATTACTTCCTCCGATTTCGCGATCTCGGATTCCTTCAAAAGCA 304 ||| ||||||||||| | |||||||||||||||||||||||||||||| ||||||| || Sbjct 132 TCTATCCTCCTTCTCTACCTACTTCCTCCGATTTCGCGATCTCGGATTCATTCAAAATCA 191 Query 305 CACCAAAGCTCTCTGTCTCTCCGCCGGCGCAGGCCACACTCCGATGGCGCTTTCTAATAT 364 |||||||||||||||||| |||| ||| |||||||| |||||||||| |||||| | || Sbjct 192 CACCAAAGCTCTCTGTCTTTCCGACGGAGCAGGCCATGCTCCGATGGCTCTTTCTCAGAT 251 Query 365 CGGATTAGCTGACGTTACCGCCGTTGAATTGGTTGATTCGATTCCTCTTGTGAAAAGAGC 424 ||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 252 CGGATTATCCGACGTTACCGCAGTTGAATTGGTTGATTCGATTCCTCTTGTGAAAAGAGC 311 Query 425 TGATCCTCATAACCTTCCGTTTTTCGACGGTGTCTTTGATTTTGCCTTCACTGCACATCT 484 |||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| Sbjct 312 TGATCCTCATAACCTTCCGTTTTTCGACCGTGTCTTTGATTTTGTCTTTACTGCACATCT 371 Query 485 AGCTGAAGCTCTGTTTCCGTGGCGGTTCGTGGAGGAAATGGAGAGGACTGTGCGACGCGG 544 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 372 AGCTGAAGCTCTGTTTCCGTGGCGGTTCGTGGAGGAGATGGAGAGGACGGTGCGACGCGG 431 Query 545 TGGGTTTTGTGTGGTTGCGGTTGATGAATGTGGTGGAGATGATGTTAGAGACATTGCTAG 604 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 432 TGGGTTTTGTGTGGTTGCGGTTGATGAATGTAGTGGAGATGATGTTAGAGACATTGCTAG 491 Query 605 GCTTTTTCATAAATCGAA-AGTCGTTGATGTTGCTAATGTAACCTTAGAAGGA-TCCAAA 662 | |||||||||| || || | ||||||||||||||||||||||||||||| || || ||| Sbjct 492 GTTTTTTCATAATTCCAAGA-TCGTTGATGTTGCTAATGTAACCTTAGAAAGAGTC-AAA 549 Query 663 AGGACTAGTATACTATTCAAAGTTCAAGACTCTA 696 || |||||||||||||||||| |||||||||||| Sbjct 550 AGAACTAGTATACTATTCAAACTTCAAGACTCTA 583 Score = 67.6 bits (36), Expect = 2e-10 Identities = 36/36 (100%), Gaps = 0/36 (0%) Strand=Plus/Plus Query 660 AAAAGGACTAGTATACTATTCAAAGTTCAAGACTCT 695 |||||||||||||||||||||||||||||||||||| Sbjct 583 AAAAGGACTAGTATACTATTCAAAGTTCAAGACTCT 618 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 54015786420 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5