BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492149
Length=2510
Score E
Sequences producing significant alignments: (Bits) Value
AT4G26590.1 | Symbols: ATOPT5, OPT5 | oligopeptide transporter ... 3892 0.0
AT5G55930.1 | Symbols: ATOPT1, OPT1 | oligopeptide transporter ... 1522 0.0
AT4G26582.1 | Symbols: | Potential natural antisense gene, loc... 1373 0.0
> AT4G26590.1 | Symbols: ATOPT5, OPT5 | oligopeptide transporter
5 | chr4:13413973-13417055 REVERSE LENGTH=2628
Length=2628
Score = 3892 bits (2107), Expect = 0.0
Identities = 2355/2476 (95%), Gaps = 11/2476 (0%)
Strand=Plus/Plus
Query 1 TTTTCATGTCAGGTCATTAACACATGTTGCTTACAAGAACATAACTTCTCCGGCAAGTTA 60
|||| ||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||
Sbjct 88 TTTTAATGTCAGGTCATTAACACAGGTTGCTTACAAGAACATTACTTCTACAGCAAGTTA 147
Query 61 TCCAGAACTCTGGTCATCCTCACCCGAGCCGATCGACGTCA-GG--GCCTAACTA-AAAA 116
| ||||||||||| ||| ||||||||| |||||||||||| || ||||||| | ||||
Sbjct 148 TTCAGAACTCTGGACATTATCACCCGAGTCGATCGACGTCAGGGCCGCCTAAC-AGAAAA 206
Query 117 TGGTAGGCTCTCTCGAAGTATCTAAGCCTCCAGATCAGAAGTTTGAGTCCAAGATCGTCA 176
|||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||||
Sbjct 207 TGGTAGGCTCTCTCGAAGTATCCAAGCCTCCAGAGCACAAGGTTGAGTCCAAGATCGTCA 266
Query 177 TAGCCGATGAAGAAGAAGAGGAGGAAAACGACAGTCCAATTGAAGAGGTCCGGTTAACCG 236
|||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||
Sbjct 267 TAGCCGATGAAGAAGAAGAGGATGAAAACGACAGTCCAATCGAAGAGGTCCGTTTAACCG 326
Query 237 TGCCGATAACCGACGATCCATCTCTACCGGTTTTGACGTTCCGAACATGGTTCTTAGGAA 296
| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct 327 TACCGATAACCGACGATCCATCTCTACCAGTTTTGACATTCCGTACATGGTTCTTAGGAA 386
Query 297 TGGTGTCTTGCGTGGTACTCGCGTTCGTGAACAATTTCTTCGGTTACCGGTCGAATCAGC 356
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 387 TGGTTTCTTGCGTGGTACTCGCGTTCGTGAACAATTTCTTCGGTTACCGGTCGAACCCGC 446
Query 357 TCATGGTATCTTCAGTCGTGGCTCAGATCGTCACTCTCCCTCTAGGAAAGCTCATGGCCA 416
||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 447 TCACGGTATCTTCAGTCGTGGCTCAGATCATCACTCTCCCTCTAGGAAAGCTCATGGCCA 506
Query 417 CGACTCTACCAACAACAAAACTCCGGTTACCTGGTACAAATTGGTCGTGTTCGTTGAACC 476
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 507 CGACTCTACCAACAACAAAACTCCGTTTACCTGGTACAAATTGGTCGTGTTCGTTGAACC 566
Query 477 CTGGACCATTTAACATGAAGGAACATGTACTAATCACCATATTCGCTAATACTGGGGCCG 536
|||||||||| |||||||||||||||||||| ||||| |||||||||||||| || || |
Sbjct 567 CTGGACCATTCAACATGAAGGAACATGTACTGATCACTATATTCGCTAATACCGGAGCTG 626
Query 537 GAGGAGCTTATGCGACCAGCATCATAACCATCGTTAAAGCATTTTATCACCGGAACCTCA 596
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct 627 GAGGAGCTTATGCCACCAGCATCCTAACCATCGTTAAAGCATTTTATCACCGGAATCTCA 686
Query 597 ATCCCGCCGCGGCCATGTTGCTTCTGCAAACCACTCAGTTGTTGGGATATGGATGGGCGG 656
|||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 687 ATCCCGCCGCCGCCATGTTGCTTGTCCAAACCACTCAGTTGTTGGGATATGGATGGGCGG 746
Query 657 GTATGTTCAGGAAATTCCTAGTGGACTCACCTTACATGTGGTGGCCTGCAAATCTTGTTC 716
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 747 GTATGTTCAGGAAATACCTAGTGGACTCACCTTACATGTGGTGGCCTGCAAATCTTGTTC 806
Query 717 AAGTCTCTCTCTTTAGAGCCTTGCATGAGAAGGAGGAGAAGCGTGAAGGCAAACAAAC-A 775
|||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |
Sbjct 807 AAGTCTCTCTCTTTAGAGCCTTACATGAGAAGGAGGAGAAGCGTGAAGGAAAACAAACGA 866
Query 776 AGACTTAGATTCTTCTTAATAGTCTTCTTCCTGAGCTTCACTTACTACATAGTCCCAGGC 835
| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 867 A-ACTTAGATTCTTCTTGATAGTCTTCTTCCTGAGCTTCACTTACTACATAGTCCCAGGC 925
Query 836 TATCTTTTCCCTTCCATCTCATCCCTCTCCTTTGTCTGCTGGATATGGACCCGCTCCGTG 895
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 926 TATCTTTTCCCTTCCATCTCATATCTCTCCTTTGTCTGCTGGATATGGACCCGCTCTGTA 985
Query 896 ACCGCTCAACAGATCGGTTCAGGGTTGCACGGTCTCGGCATTGGCTCATTTGGTCTCGAT 955
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct 986 ACCGCTCAACAGATCGGTTCAGGGCTGCACGGTCTCGGCATTGGCTCATTTGGTCTTGAT 1045
Query 956 TGGTCCACGGTTGCAGGTTTCTTAGGCAGTCCTTTAGCTGTACCGTTCTTCGCTATAGCC 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1046 TGGTCCACGGTTGCAGGTTTCTTAGGCAGTCCTTTAGCTGTACCGTTCTTCGCTATAGCC 1105
Query 1016 AATTCCTTTGGCGGATTTGTCATCTTCTTCTACATCATCCTTCCTATCTTCTACTGGAGC 1075
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1106 AATTCCTTTGGCGGATTTATCATCTTCTTCTACATCATCCTTCCTATCTTCTACTGGAGC 1165
Query 1076 AACGCTTACGAGGCAAAGAAGTTTCCTTTTTATACCTCTCACGCATTTGATCACACTGGT 1135
||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct 1166 AACGCTTACGAGGCAAAGAAGTTTCCTTTCTATACCTCTCACCCATTTGATCACACTGGT 1225
Query 1136 CAGCGTTACAACACCACTCGTATCCTCAACCATAAAACATTTGATATTGATCTTCCCGCT 1195
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||
Sbjct 1226 CAGCGTTACAACACCACTCGTATCCTCAACCAGAAAACATTCAATATTGATCTTCCTGCT 1285
Query 1196 TACGAAAGCTATAGCAAGCTTTACCTTAGCATTCTGTTTGCTCTGATTTATGGACTCAGC 1255
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 1286 TACGAAAGCTATAGCAAGCTTTACCTTAGCATTCTGTTTGCTCTGATCTATGGGCTCAGC 1345
Query 1256 TTCGGCACCCTTACCGCAACCATTTCTCACGTCGCCCTCTTTGACGGAAAGTTTATTTGG 1315
||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 1346 TTCGGTACCCTTACCGCAACCATTTCTCATGTCGCCCTCTTTGACGGAAAGTTTATCTGG 1405
Query 1316 GAGCTGTGGAAGAAGGCAACATTGGCGACAAAGGACAAGTTTGGAGATGTGCATACAAGA 1375
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1406 GAGCTGTGGAAGAAGGCAACATTGACGACAAAGGACAAGTTTGGAGATGTGCATACAAGA 1465
Query 1376 CTGATGAAGAAGAATTATAAGGAAGTACCTCAATGGTGGTTCGTAGCGGTTCTCGCTGTT 1435
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct 1466 TTGATGAAGAAGAATTATAAGGAAGTACCTCAATGGTGGTTCGTTGCGGTTCTCGCTGCT 1525
Query 1436 TCCTTTGTGCTAGCTCTTTACGCATGTGAGGGATTTGGCAAACAGCTTCAGCTTCCGTGG 1495
|||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||
Sbjct 1526 TCCTTTGTGCTAGCTCTTTATGCATGTGAGGGATTTGGCAAACAGCTTCAGCTCCCATGG 1585
Query 1496 TGGGGACTTCTACTCGCTTGCGCCATCGCCTTTACCTTCACTTTGCCTATTGGAGTTATC 1555
||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1586 TGGGGACTTTTACTCGCTTGTGCCATCGCCTTTACCTTCACTTTGCCTATTGGAGTTATC 1645
Query 1556 CTAGCAACCACAAACCAGAAAATGGGTCTTAATGTTATATCGGAACTGATCATAGGGTTC 1615
||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct 1646 CTAGCGACCACAAACCAGCGAATGGGTCTTAATGTTATATCGGAACTGATCATCGGGTTC 1705
Query 1616 TTGTATCCGGGAAAGCCACTTGCCAATGTGACTTTTAAGACTTATGGTACTGTGAGTAT- 1674
|||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 1706 TTGTATCCGGGAAAGCCACTTGCCAATGTGGCTTTTAAGACTTATGGTTCTGTGAGTATA 1765
Query 1675 GTCTCAAGCCTTGAACTTTGTGGGAGACTTCAAACTTGGCCACTACATGAAGATTCCTCC 1734
| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1766 G-CTCAAGCCTTGTACTTTGTCGGAGACTTCAAACTTGGCCACTACATGAAGATTCCTCC 1824
Query 1735 GAGATCTATGTTCCTCGTTCAACTCGTTGCGACTATTGTTGCTTCAACTGTCTCCTTTGG 1794
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1825 GAGATCTATGTTCATCGTTCAACTCGTTGCGACTATTGTTGCTTCAACTGTCTCCTTCGG 1884
Query 1795 GACCACATGGTGGCTGCTTTCTTCAGTCGAGAACATCTGTAACACAGATAAGCTCCCAAA 1854
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1885 GACCACATGGTGGTTGCTTTCTTCAGTCGAGAACATCTGTAACACAGATATGCTCCCAAA 1944
Query 1855 GAGTAGTCCGTGGACTTGCCCTGGAGATGAAGTATTCTACAACGCGTCAATCATTTGGGG 1914
|||||||||||||||||||||||| |||| ||| |||||||||||||| |||||||||||
Sbjct 1945 GAGTAGTCCGTGGACTTGCCCTGGGGATGTAGTGTTCTACAACGCGTCGATCATTTGGGG 2004
Query 1915 AATCATCGGTCCTGGAAGGATGTTCACAAGTAAAGGTGTTTACCCCGGGATGAACTGGTT 1974
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 2005 AATCATCGGTCCTGGAAGGATGTTCACAAGTAAAGGTATATACCCCGGGATGAACTGGTT 2064
Query 1975 CTTCCTCATTGGCCTCCTTGCTCCTGTCCCGGTCTGGTTCTTTGCAAGGAAATTCCCGGA 2034
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2065 CTTCCTCATTGGCTTCCTTGCTCCTGTCCCGGTCTGGTTCTTTGCAAGGAAATTCCCGGA 2124
Query 2035 GAAGAAGTGGATACAGCTTATTCATATTCCCTTGATCTTCTCAGGGGCTAATGCGATGCC 2094
||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||
Sbjct 2125 GAAGAAGTGGATACATCAGATTCATATTCCCTTGATCTTCTCAGGGGCTAATGTGATGCC 2184
Query 2095 AATGGCCAAGGCTGTGCATTACTGGTCGTGGTTCGTTGTCGGGATCGTGTTCAACTACTA 2154
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct 2185 AATGGCCAAGGCTGTGCATTACTGGTCGTGGTTCGCTGTTGGGATCGTGTTCAACTACTA 2244
Query 2155 TATCTTCAGGAGGTACAAAGGG-TGGTGGGCAAGGCATAACTACATCCTCTCTGCAGCTC 2213
|||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct 2245 TATCTTCAGGAGGTACAA-GGGATGGTGGGCAAGGCATAACTACATCCTCTCTGCAGCTC 2303
Query 2214 TTGATGCAGGCACAGCGATTATGGGAGTGTTGATCTACTTTACGTTGCAGAACAATAACA 2273
||||||||||||| ||| ||||||||||||||||||||||| |||| |||||||||||||
Sbjct 2304 TTGATGCAGGCACTGCGGTTATGGGAGTGTTGATCTACTTTGCGTTACAGAACAATAACA 2363
Query 2274 TAAGCTTACCAGATTGGTGGGGGAATGAGAACACAGACCATTGCCCTTTGGCAAATTGCC 2333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2364 TAAGCTTACCAGATTGGTGGGGGAATGAGAACACAGACCATTGCCCTTTGGCAAATTGCC 2423
Query 2334 CGACAGAGAAAGGGATCGTCGCTAAGGGCTGCCCGGTGTTCTAAAACCTTGTTGCAGTTC 2393
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2424 CAACAGAGAAAGGGATCGTCGCTAAGGGCTGCCCGGTGTTCTAAAACCTTGTTGCAGTTT 2483
Query 2394 AACATTTTCTCTGGAGTTTCTCAGACCTGCAGGTGAAAGACTGTTACTGCCAAGTGGTTT 2453
|||||| |||||| ||||||||| |||||||||||| ||| |||||||| |||| ||||
Sbjct 2484 AACATTATCTCTGTAGTTTCTCATACCTGCAGGTGAGGGACAGTTACTGCAAAGTCGTTT 2543
Query 2454 GGTTGCCATAATAATA 2469
||| ||||||||||||
Sbjct 2544 GGTGGCCATAATAATA 2559
> AT5G55930.1 | Symbols: ATOPT1, OPT1 | oligopeptide transporter
1 | chr5:22652715-22656106 FORWARD LENGTH=2820
Length=2820
Score = 1522 bits (824), Expect = 0.0
Identities = 1739/2178 (80%), Gaps = 74/2178 (3%)
Strand=Plus/Plus
Query 194 GAGGAGGAAAACGACAGTCCAATTGAAGAGGTCCGGTTAACCGTGCCGATAACCGACGAT 253
|||||||| || || | ||| |||||||| ||||||||||| || |||||||||||||||
Sbjct 358 GAGGAGGAGAATGATAATCCGATTGAAGAAGTCCGGTTAACGGTACCGATAACCGACGAT 417
Query 254 CCATCTCTACCGGTTTTGACGTTCCGAACATGG-TTCTTAGGAATGGTGTCTTGCGTGGT 312
||| | |||||||| | ||||| ||||||||| |||| ||| | | |||||| | |
Sbjct 418 CCAACACTACCGGTGCTAACGTTTCGAACATGGACTCTT-GGACTTTTCTCTTGCATATT 476
Query 313 ACTCGCGTTCGTGAACAATTTCTTCGGTTACCGGTCGAATCAGCTCAT-GGTATCTTCAG 371
|| || ||||||||| | ||||| |||| ||||||||| ||||| | |||||||||||
Sbjct 477 GCTTGCCTTCGTGAACCAGTTCTTTGGTTTCCGGTCGAACCAGCT-TTGGGTATCTTCAG 535
Query 372 TCGTGGCTCAGATCGTCACTCTCCCTCTA-GGAAAGCTCATGGCCACGACTCTACCAACA 430
| | ||| |||||||| || || || ||| ||||| |||||||| | ||| ||||| |||
Sbjct 536 TTGCGGCACAGATCGTGACCCTTCCGCTAGGGAAA-CTCATGGCAAAGACGCTACCGACA 594
Query 431 ACA-AAACTCCGGTTACCTGGTACAAATTGGTCGTGTTCGTTGAACCCTGGACCATTTAA 489
| | ||| | |||| || || || ||||||||||| || || |||||||| || || ||
Sbjct 595 A-AGAAATTTGGGTTTCCCGGGACGAATTGGTCGTGGTCTTTTAACCCTGGTCCGTTCAA 653
Query 490 CATGAAGGAACATGTACTAATCACCATATTCGCTAATACTGGGGCCGGAGGAGCTTATGC 549
|||||||||||||| || || || ||||| ||||| || || || || |||| ||| ||
Sbjct 654 TATGAAGGAACATGTTCTTATTACAATATTTGCTAACACCGGAGCTGGTGGAGTTTACGC 713
Query 550 GACCAGCATCATAACCATCGTTAAAGCATTTTATCACCG-GAACCTCAATCCCGCCGCGG 608
||||| || || ||||| |||||||| |||||| | || || || ||| |||||| |
Sbjct 714 CACCAGTATTATTACCATTGTTAAAGCGTTTTATAATCGTCAA-CTTAATGTCGCCGCCG 772
Query 609 CCATGTTGCT-TCTGCAAACCACTCAGTTGTTGGGATATGGATGGGCGGGTATGTTCAGG 667
|||||||||| || |||||||||||||||||||||||||||||||| || || ||||||
Sbjct 773 CCATGTTGCTCACT-CAAACCACTCAGTTGTTGGGATATGGATGGGCTGGAATCTTCAGG 831
Query 668 AAATTCCTAGTGGACTCACCTTACATGTGGTGGCCTG-CAAATCTT-GTTCAAGTCTCTC 725
|| ||||| ||||| ||||| || ||||||||||| | ||||| || ||||||||||| |
Sbjct 832 AAGTTCCTTGTGGATTCACCGTATATGTGGTGGCC-GTCAAAT-TTGGTTCAAGTCTCAC 889
Query 726 TCTTTAGAGCCTTGCATGAGAAGGAGGA-GAAGCGTGAA-GGCAAACAAACAAGACTTAG 783
|||||||||| || |||||||||||||| | | || ||| |||||||||| ||||
Sbjct 890 TCTTTAGAGCTTTACATGAGAAGGAGGATCTA-CAAAAAGGGC-AACAAACAAGGTTTAG 947
Query 784 ATTCTTCTTAATAGTCTTCT-TCCTGAGCTTCACTTACTACATAGTCCCAGGCTATCTTT 842
||||||| | || ||||||| | ||||||| ||||||||||| |||| ||||| ||||
Sbjct 948 ATTCTTCATCATTGTCTTCTGT-GTGAGCTTTGCTTACTACATAATCCCCGGCTACCTTT 1006
Query 843 TCCCTTCCATCTCATCCCTCTCCTTTGTCTGCTGGATATGGACCCGCTCCGTGACCGCTC 902
|||||||||| || | | || ||||| |||||||| |||| |||| ||||||||||
Sbjct 1007 TCCCTTCCATTTCCGCAATTTCATTTGTTTGCTGGATTTGGAAAAGCTCAGTGACCGCTC 1066
Query 903 A-ACAGATCGGTTCAGGGTTGC-ACGGTCTCGGCATTGGCTCATTTGGTCTCGATTGGTC 960
| | | ||||||| ||| | | | ||| | || ||||| || || ||||| || |||||
Sbjct 1067 AGATTG-TCGGTTCTGGGCT-CAAGGGTTTAGGTATTGGTTCGTTCGGTCTTGACTGGTC 1124
Query 961 CACGGTTGCAGGTTTCTTAGGCAGTCCTTTAGCTGTACCGTTCTTCGCTATAGCCAATTC 1020
||| ||||| ||||||||||||||||| || |||||||| |||||||| || |||||||
Sbjct 1125 CACAGTTGCTGGTTTCTTAGGCAGTCCGTTGGCTGTACCATTCTTCGCCATTGCCAATTT 1184
Query 1021 CTTTGGCGGATT-TGTCATCTTCTTCTACATCATCCTTCCTATCTTCTACTGGAGC-AAC 1078
|||||| ||||| | ||||||| || ||||| | || |||||||||||||||| | ||
Sbjct 1185 CTTTGGAGGATTCT-TCATCTTTTTATACATTGTTCTACCTATCTTCTACTGGA-CTAAT 1242
Query 1079 GCTTACGAGGCAAAGAAGTTTCCTTTTTATACCTCTCACGCATTTGATCACACTGGTCAG 1138
||||| || || |||||||||| || ||||| || ||| | |||||||| ||||| ||
Sbjct 1243 GCTTATGATGCTCAGAAGTTTCCGTTCTATACTTCACACACCTTTGATCAGACTGGACA- 1301
Query 1139 C-GTTACAACACCACTCGTATCCTCAACCATAAAACATTT-GATATTGATCTTCCCGCTT 1196
| || |||| || ||||||||||| | || | |||| ||||| |||| |||||
Sbjct 1302 CACCTATAACATTACCCGTATCCTCAATGAGAAGA-ATTTCGATATCAATCTAGACGCTT 1360
Query 1197 ACGAA-AGCTATAGCAAGCTTTACCTT-AGCATTCTGTTTGC-TCTGATTTATGGACTCA 1253
|| || | || |||||||| || || || | |||| || | || | ||||||||||
Sbjct 1361 AC-AACGGTTACAGCAAGCTCTA-TTTGAGTGTGATGTTCGCGT-TGCTCTATGGACTCA 1417
Query 1254 GCTTCGGCACCCTTACCGCAACCATTTCTCACGTCGCCCTCTTTGACGGAAAGTTTAT-T 1312
|||| || | ||| ||| ||||| ||||| || ||||||| ||| ||||||||||| |
Sbjct 1418 GCTTTGGTTCTCTTTGCGCTACCATCTCTCATGTTGCCCTCTATGATGGAAAGTTTATAT 1477
Query 1313 TGGGAGCTGTGGAAGAAGGC-AACATTGGCGACAAAGGACAAGTTTGGAGATGTGCATAC 1371
|||| ||||||||||||| || | || ||||||||||||| || || |||||| |
Sbjct 1478 GGGGA-ATGTGGAAGAAGGCAAAGA-CAGCAACAAAGGACAAGTACGGTGACGTGCATTC 1535
Query 1372 AAGACTGATGAAGAAGAATTAT-AAGGAAGTACCTCAATGGTGGTTCGTAGCGGTTCTCG 1430
||| ||||||||||||||||| || ||||||||||||||||||| | || ||||| |
Sbjct 1536 GAGATTGATGAAGAAGAATTATCAA-TCAGTACCTCAATGGTGGTTCATCGCAGTTCTAG 1594
Query 1431 CTGTTTCCTTTG-TGCTAGCTCTTTACGCATGTGAGGGATTTGGCAAACAGCTTCAGCTT 1489
| ||||||||| | | || || || || || ||||| |||| |||||||||||||||
Sbjct 1595 TTATTTCCTTTGCT-TTCGCACTCTATGCTTGCGAGGGCTTTGACAAACAGCTTCAGCTC 1653
Query 1490 CCGTGGTGGGGACTTCTACTCGCTTGCGCCATCGCCTTT-ACCTTCACTTTGCCTATTGG 1548
|| |||||||||||| |||||||||||||||||| |||| |||||| || ||||| ||
Sbjct 1654 CCATGGTGGGGACTTATACTCGCTTGCGCCATCG-CTTTGTTCTTCACATTACCTATCGG 1712
Query 1549 AGTTATCCTAGCAACCACAAACCAGAAAATGGGTCTTAATGTTATATCGGAACTGATCAT 1608
|||||||| |||||| || |||||| ||||||||||||| |||||| | |||||||||||
Sbjct 1713 AGTTATCCAAGCAACTACTAACCAGCAAATGGGTCTTAACGTTATAACAGAACTGATCAT 1772
Query 1609 AGGGTTCTTGTATCCGGGAAAGCCACTTGCCAATGT-GACTTTTAAGACTTATGG-TACT 1666
|||| ||| || || ||||||||||| |||||||| | |||| ||||| || || |||
Sbjct 1773 CGGGTACTTATACCCAGGAAAGCCACTAGCCAATGTCG-CTTTCAAGACATACGGATAC- 1830
Query 1667 GTGAGTATGTCTCAAGCCTTGAACTTTGTGGGAGACTTCAAACTTGGCCACTACATGAAG 1726
| |||||||||||||||||| ||||||| ||||||||||| ||||| ||||||||||||
Sbjct 1831 ATCAGTATGTCTCAAGCCTTGTACTTTGTAGGAGACTTCAAGCTTGGTCACTACATGAAG 1890
Query 1727 ATTCCTCCGAGATCTATGTTCCTCGTTCAACTCGTTGCGACTATTGTTGCTTCAACTGTC 1786
|||||||| ||||| |||||| |||| || || ||||| ||| | ||||| |||||||||
Sbjct 1891 ATTCCTCCAAGATCAATGTTCATCGTCCAGCTTGTTGCAACTGTGGTTGCATCAACTGTC 1950
Query 1787 TCCTTTGGGACCACATGGTGGCTGC-TTTCTTCAGTCGAGAACATCTGTAA-CACAGATA 1844
| ||| || || || |||||||| | || | || ||||||||||| ||||| | |||
Sbjct 1951 TGCTTCGGAACAACCTGGTGGCT-CATTACATCCGTCGAGAACATATGTAATGTC-GATT 2008
Query 1845 AGCTCCCAAAGAGTAGTCCGTGGACTTGCCCTGGAGATGAAGTATTCTACAACGCGTCAA 1904
|||||| | ||||||| |||||||| |||||||||||||| |||||||| || ||||
Sbjct 2009 TGCTCCCGGTGGGTAGTCCATGGACTTGTCCTGGAGATGAAGTGTTCTACAATGCATCAA 2068
Query 1905 TCATTTGGGGAATCATCGGTCCTGGAAGGATGTTCA-C-AAGTAAAGGTGTTTACCCCGG 1962
|||| |||||| | || ||||| || || ||||| | | ||| ||||| | || |||||
Sbjct 2069 TCATATGGGGAGTGATTGGTCCAGGGAGAATGTTTACCAAAG--AAGGTATCTATCCCGG 2126
Query 1963 GATGAACTGGTTCTTCCTCATTGGCCTCCTTGCTCCTGT-CCCGGTCTGGTTCTT-T-GC 2019
|||||||||||||||||| || || ||||| ||||| || ||| |||||| | | | |
Sbjct 2127 GATGAACTGGTTCTTCCTTATCGGTCTCCTCGCTCCAGTTCCCT-TCTGGTACCTATCG- 2184
Query 2020 AAGGAAATTCCCGGAGAAGAAGTGGATACAGCTTATTCATATTCCCTTGATCTTCTCAGG 2079
||| || ||||| |||||||| ||| || | | || ||| |||||||||||||||| |
Sbjct 2185 AAG-AAGTTCCCAGAGAAGAAATGGCTAAAACAGATCCATGTTCCCTTGATCTTCTCTGC 2243
Query 2080 GGCTAATGCG--ATGCCA-ATGGCCAAGGCTGTGCATTACTGGTCGTGGTTCGTTGTCGG 2136
| ||| ||| |||||| | | | |||||||||||||||||||| ||| | | || ||
Sbjct 2244 AG-TAA-GCGCCATGCCACAAG-CTAAGGCTGTGCATTACTGGTCCTGGGCCATCGTTGG 2300
Query 2137 GATCGTGTTCAACTACTATATCTTCAGGAGGTACAAAGGGTGGTGGGCAAGGCATAACTA 2196
| | |||||||||||||| ||||||||||||| |||| |||||||| ||||| || ||
Sbjct 2301 GGTTGTGTTCAACTACTACATCTTCAGGAGGTTCAAAACTTGGTGGGCGAGGCACAATTA 2360
Query 2197 CATCCTCTCTGCAGCTCTTGATGCAGGCACAGCGATTATGGGAGTGTTGATCTACTTTAC 2256
|||||||||||| || ||||||||||| || |||||||||||||||||||| | ||| |
Sbjct 2361 CATCCTCTCTGCGGCGCTTGATGCAGGTACTGCGATTATGGGAGTGTTGATATTCTTCGC 2420
Query 2257 GTTGCAGAACAATAACATAAGCTTACCAGATTGGTGGGGGAATGAGAACACAGACCATTG 2316
|| ||||||||| | ||||||||||| |||||||||||| |||||| ||||||||||
Sbjct 2421 ATTCCAGAACAATGATATAAGCTTACCTGATTGGTGGGGGCTTGAGAATTCAGACCATTG 2480
Query 2317 CCCTTTGGCAAATTGCCC 2334
|||| | || |||||||
Sbjct 2481 CCCTCTAGCGCATTGCCC 2498
> AT4G26582.1 | Symbols: | Potential natural antisense gene, locus
overlaps with AT4G26590 | chr4:13413579-13414943 FORWARD
LENGTH=987
Length=987
Score = 1373 bits (743), Expect = 0.0
Identities = 819/856 (96%), Gaps = 4/856 (0%)
Strand=Plus/Minus
Query 1568 AACCAGAAAATGGGTCTTAATGTTATATCGGAACTGATCATAGGGTTCTTGTATCCGGGA 1627
|||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 987 AACCAGCGAATGGGTCTTAATGTTATATCGGAACTGATCATCGGGTTCTTGTATCCGGGA 928
Query 1628 AAGCCACTTGCCAATGTGACTTTTAAGACTTATGGTACTGTGAGTAT-GTCTCAAGCCTT 1686
|||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||||||
Sbjct 927 AAGCCACTTGCCAATGTGGCTTTTAAGACTTATGGTTCTGTGAGTATAG-CTCAAGCCTT 869
Query 1687 GAACTTTGTGGGAGACTTCAAACTTGGCCACTACATGAAGATTCCTCCGAGATCTATGTT 1746
| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 868 GTACTTTGTCGGAGACTTCAAACTTGGCCACTACATGAAGATTCCTCCGAGATCTATGTT 809
Query 1747 CCTCGTTCAACTCGTTGCGACTATTGTTGCTTCAACTGTCTCCTTTGGGACCACATGGTG 1806
| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 808 CATCGTTCAACTCGTTGCGACTATTGTTGCTTCAACTGTCTCCTTCGGGACCACATGGTG 749
Query 1807 GCTGCTTTCTTCAGTCGAGAACATCTGTAACACAGATAAGCTCCCAAAGAGTAGTCCGTG 1866
| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 748 GTTGCTTTCTTCAGTCGAGAACATCTGTAACACAGATATGCTCCCAAAGAGTAGTCCGTG 689
Query 1867 GACTTGCCCTGGAGATGAAGTATTCTACAACGCGTCAATCATTTGGGGAATCATCGGTCC 1926
|||||||||||| |||| ||| |||||||||||||| |||||||||||||||||||||||
Sbjct 688 GACTTGCCCTGGGGATGTAGTGTTCTACAACGCGTCGATCATTTGGGGAATCATCGGTCC 629
Query 1927 TGGAAGGATGTTCACAAGTAAAGGTGTTTACCCCGGGATGAACTGGTTCTTCCTCATTGG 1986
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 628 TGGAAGGATGTTCACAAGTAAAGGTATATACCCCGGGATGAACTGGTTCTTCCTCATTGG 569
Query 1987 CCTCCTTGCTCCTGTCCCGGTCTGGTTCTTTGCAAGGAAATTCCCGGAGAAGAAGTGGAT 2046
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 568 CTTCCTTGCTCCTGTCCCGGTCTGGTTCTTTGCAAGGAAATTCCCGGAGAAGAAGTGGAT 509
Query 2047 ACAGCTTATTCATATTCCCTTGATCTTCTCAGGGGCTAATGCGATGCCAATGGCCAAGGC 2106
||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 508 ACATCAGATTCATATTCCCTTGATCTTCTCAGGGGCTAATGTGATGCCAATGGCCAAGGC 449
Query 2107 TGTGCATTACTGGTCGTGGTTCGTTGTCGGGATCGTGTTCAACTACTATATCTTCAGGAG 2166
||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct 448 TGTGCATTACTGGTCGTGGTTCGCTGTTGGGATCGTGTTCAACTACTATATCTTCAGGAG 389
Query 2167 GTACAAAGGG-TGGTGGGCAAGGCATAACTACATCCTCTCTGCAGCTCTTGATGCAGGCA 2225
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 388 GTAC-AAGGGATGGTGGGCAAGGCATAACTACATCCTCTCTGCAGCTCTTGATGCAGGCA 330
Query 2226 CAGCGATTATGGGAGTGTTGATCTACTTTACGTTGCAGAACAATAACATAAGCTTACCAG 2285
| ||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct 329 CTGCGGTTATGGGAGTGTTGATCTACTTTGCGTTACAGAACAATAACATAAGCTTACCAG 270
Query 2286 ATTGGTGGGGGAATGAGAACACAGACCATTGCCCTTTGGCAAATTGCCCGACAGAGAAAG 2345
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 269 ATTGGTGGGGGAATGAGAACACAGACCATTGCCCTTTGGCAAATTGCCCAACAGAGAAAG 210
Query 2346 GGATCGTCGCTAAGGGCTGCCCGGTGTTCTAAAACCTTGTTGCAGTTCAACATTTTCTCT 2405
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct 209 GGATCGTCGCTAAGGGCTGCCCGGTGTTCTAAAACCTTGTTGCAGTTTAACATTATCTCT 150
Query 2406 GGAGTTTCTCAGACCT 2421
| ||||||||| ||||
Sbjct 149 GTAGTTTCTCATACCT 134
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 124564519469
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5